HEADER TRANSCRIPTION INHIBITOR/TRANSCRIPTION 27-DEC-07 2JZ3 TITLE SOCS BOX ELONGINBC TERNARY COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR OF CYTOKINE SIGNALING 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SOCS BOX, UNP RESIDUES 186-225; COMPND 5 SYNONYM: SOCS-3, CYTOKINE-INDUCIBLE SH2 PROTEIN 3, CIS-3, PROTEIN EF- COMPND 6 10; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ELONGINB, RNA POLYMERASE II TRANSCRIPTION FACTOR SIII COMPND 12 SUBUNIT B, SIII P18, ELONGIN-B, ELOB, ELONGIN 18 KDA SUBUNIT; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1; COMPND 16 CHAIN: C; COMPND 17 FRAGMENT: UNP RESIDUES 17-112; COMPND 18 SYNONYM: ELONGINC, RNA POLYMERASE II TRANSCRIPTION FACTOR SIII COMPND 19 SUBUNIT C, SIII P15, ELONGIN-C, ELOC, ELONGIN 15 KDA SUBUNIT, STROMAL COMPND 20 MEMBRANE-ASSOCIATED PROTEIN SMAP1B HOMOLOG; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PGEX-4T; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PGEX-4T; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 19 ORGANISM_COMMON: MOUSE; SOURCE 20 ORGANISM_TAXID: 10090; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 24 EXPRESSION_SYSTEM_VECTOR: PBB75ELOC KEYWDS SOCS PROTEINS, ELONGINS, CYTOKINE SIGNALING, GROWTH REGULATION, KEYWDS 2 PHOSPHOPROTEIN, SH2 DOMAIN, SIGNAL TRANSDUCTION INHIBITOR, UBL KEYWDS 3 CONJUGATION PATHWAY, NUCLEUS, TRANSCRIPTION, TRANSCRIPTION KEYWDS 4 REGULATION, SIGNALING PROTEIN, TRANSCRIPTION INHIBITOR-TRANSCRIPTION KEYWDS 5 COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.J.BABON,J.SABO,A.SOETOPO,S.YAO,M.F.BAILEY,J.ZHANG,N.A.NICOLA, AUTHOR 2 R.S.NORTON REVDAT 4 01-MAY-24 2JZ3 1 REMARK REVDAT 3 02-MAR-11 2JZ3 1 COMPND REVDAT 2 24-FEB-09 2JZ3 1 VERSN REVDAT 1 23-SEP-08 2JZ3 0 JRNL AUTH J.J.BABON,J.K.SABO,A.SOETOPO,S.YAO,M.F.BAILEY,J.-G.ZHANG, JRNL AUTH 2 N.A.NICOLA,R.S.NORTON JRNL TITL THE SOCS BOX DOMAIN OF SOCS3: STRUCTURE AND INTERACTION WITH JRNL TITL 2 THE ELONGINBC-CULLIN5 UBIQUITIN LIGASE JRNL REF J.MOL.BIOL. V. 381 928 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18590740 JRNL DOI 10.1016/J.JMB.2008.06.038 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, TALOS REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), CORNILESCU, DELAGLIO AND REMARK 3 BAX (TALOS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JZ3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000100470. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM [U-100% 13C; U-100% 15N] REMARK 210 SOCS BOX; 1MM ELONGINB; 1MM REMARK 210 ELONGINC; 50MM POTASSIUM REMARK 210 CHLORIDE; 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D HNCA; REMARK 210 3D HN(CO)CA; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 3D HCCH-TOCSY; 2D REMARK 210 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LEU A 16 REMARK 465 ASP A 17 REMARK 465 SER A 18 REMARK 465 TYR A 19 REMARK 465 GLU A 20 REMARK 465 LYS A 21 REMARK 465 VAL A 22 REMARK 465 THR A 23 REMARK 465 GLN A 24 REMARK 465 LEU A 25 REMARK 465 PRO A 26 REMARK 465 GLY A 27 REMARK 465 PRO A 28 REMARK 465 ILE A 29 REMARK 465 ARG A 30 REMARK 465 GLU A 31 REMARK 465 PHE A 32 REMARK 465 LEU A 33 REMARK 465 ASP A 34 REMARK 465 GLN A 35 REMARK 465 TYR A 36 REMARK 465 ASP A 37 REMARK 465 ALA A 38 REMARK 465 PRO A 39 REMARK 465 LEU A 40 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS B 10 H THR B 12 0.92 REMARK 500 H LEU C 21 O PHE C 29 1.42 REMARK 500 O LYS C 20 H VAL C 60 1.45 REMARK 500 O ALA C 36 HG SER C 39 1.46 REMARK 500 H ARG B 8 O VAL B 75 1.49 REMARK 500 O MET C 17 H ARG C 33 1.52 REMARK 500 O ALA B 81 H ASP B 83 1.55 REMARK 500 O GLU B 114 H ALA B 116 1.56 REMARK 500 O LYS C 32 H ALA C 36 1.56 REMARK 500 O ALA B 87 H CYS B 89 1.57 REMARK 500 C HIS B 10 H THR B 12 1.58 REMARK 500 H VAL C 19 O VAL C 31 1.60 REMARK 500 O HIS B 10 N THR B 12 1.79 REMARK 500 O LEU B 5 O THR B 16 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 3 -163.63 -74.13 REMARK 500 1 LYS B 11 -20.88 40.35 REMARK 500 1 SER B 22 -99.59 -63.91 REMARK 500 1 THR B 23 122.27 168.51 REMARK 500 1 ASP B 40 -68.32 -146.21 REMARK 500 1 GLU B 41 41.68 -91.56 REMARK 500 1 ASP B 47 70.33 55.12 REMARK 500 1 PHE B 62 -53.90 -159.10 REMARK 500 1 THR B 63 -131.30 40.56 REMARK 500 1 ALA B 67 112.32 -173.71 REMARK 500 1 ARG B 68 -171.64 176.82 REMARK 500 1 ASP B 82 -58.50 66.45 REMARK 500 1 ASP B 83 60.30 -172.66 REMARK 500 1 GLU B 86 -78.73 -137.67 REMARK 500 1 ALA B 87 -130.95 -60.45 REMARK 500 1 LEU B 88 -49.14 69.54 REMARK 500 1 PHE B 93 -160.55 -55.82 REMARK 500 1 SER B 95 49.96 -161.03 REMARK 500 1 GLU B 98 -157.17 -137.73 REMARK 500 1 MET B 103 38.25 -86.63 REMARK 500 1 LYS B 104 104.36 -45.69 REMARK 500 1 SER B 110 -59.23 -171.22 REMARK 500 1 ASN B 113 149.16 60.11 REMARK 500 1 GLN B 115 -59.18 67.01 REMARK 500 1 ALA B 116 129.72 64.55 REMARK 500 1 SER C 47 10.42 -144.22 REMARK 500 1 ASN C 55 -158.74 -139.44 REMARK 500 1 GLU C 56 76.63 61.51 REMARK 500 1 GLU C 64 30.01 -141.06 REMARK 500 1 SER C 86 -79.19 -103.47 REMARK 500 1 SER C 87 62.75 67.10 REMARK 500 1 THR C 88 -52.85 -156.20 REMARK 500 1 ILE C 90 87.31 42.59 REMARK 500 1 PRO C 91 -159.31 -72.82 REMARK 500 1 GLU C 98 -35.43 -179.30 REMARK 500 1 ALA C 100 -32.06 128.23 REMARK 500 1 LEU C 110 44.52 -97.81 REMARK 500 1 ASP C 111 -141.26 40.11 REMARK 500 2 THR A 3 -166.85 -62.93 REMARK 500 2 LYS B 11 -23.84 43.25 REMARK 500 2 SER B 22 -97.18 -63.75 REMARK 500 2 THR B 23 120.11 172.04 REMARK 500 2 ASP B 40 -82.46 -173.29 REMARK 500 2 GLU B 41 38.00 -86.02 REMARK 500 2 ASP B 47 74.76 46.64 REMARK 500 2 THR B 63 -155.54 166.96 REMARK 500 2 SER B 64 31.52 167.03 REMARK 500 2 GLN B 65 15.94 55.62 REMARK 500 2 THR B 66 25.18 -155.21 REMARK 500 2 ALA B 67 67.18 -65.70 REMARK 500 REMARK 500 THIS ENTRY HAS 736 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15606 RELATED DB: BMRB DBREF 2JZ3 A 1 40 UNP O35718 SOCS3_MOUSE 186 225 DBREF 2JZ3 B 1 118 UNP Q15370 ELOB_HUMAN 1 118 DBREF 2JZ3 C 17 112 UNP P83940 ELOC_MOUSE 17 112 SEQRES 1 A 40 VAL ALA THR LEU GLN HIS LEU CYS ARG LYS THR VAL ASN SEQRES 2 A 40 GLY HIS LEU ASP SER TYR GLU LYS VAL THR GLN LEU PRO SEQRES 3 A 40 GLY PRO ILE ARG GLU PHE LEU ASP GLN TYR ASP ALA PRO SEQRES 4 A 40 LEU SEQRES 1 B 118 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 B 118 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 B 118 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 B 118 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 B 118 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 B 118 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 B 118 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 B 118 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 9 B 118 PRO GLN ASP SER GLY SER SER ALA ASN GLU GLN ALA VAL SEQRES 10 B 118 GLN SEQRES 1 C 96 MET TYR VAL LYS LEU ILE SER SER ASP GLY HIS GLU PHE SEQRES 2 C 96 ILE VAL LYS ARG GLU HIS ALA LEU THR SER GLY THR ILE SEQRES 3 C 96 LYS ALA MET LEU SER GLY PRO GLY GLN PHE ALA GLU ASN SEQRES 4 C 96 GLU THR ASN GLU VAL ASN PHE ARG GLU ILE PRO SER HIS SEQRES 5 C 96 VAL LEU SER LYS VAL CYS MET TYR PHE THR TYR LYS VAL SEQRES 6 C 96 ARG TYR THR ASN SER SER THR GLU ILE PRO GLU PHE PRO SEQRES 7 C 96 ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU MET ALA ALA SEQRES 8 C 96 ASN PHE LEU ASP CYS HELIX 1 1 THR A 3 HIS A 15 1 13 HELIX 2 2 THR B 23 LEU B 35 1 13 HELIX 3 3 THR B 56 GLY B 61 1 6 HELIX 4 4 ARG C 33 LEU C 37 1 5 HELIX 5 5 THR C 38 GLY C 40 5 3 HELIX 6 6 THR C 41 GLY C 48 1 8 HELIX 7 7 PRO C 66 THR C 84 1 19 HELIX 8 8 GLU C 102 LEU C 110 1 9 SHEET 1 A 7 ARG B 43 LYS B 46 0 SHEET 2 A 7 ALA B 73 ALA B 78 -1 O ALA B 78 N ARG B 43 SHEET 3 A 7 ASP B 2 ARG B 8 1 N ARG B 8 O VAL B 75 SHEET 4 A 7 THR B 12 LYS B 19 -1 O ILE B 14 N ILE B 7 SHEET 5 A 7 GLU C 28 LYS C 32 1 O ILE C 30 N PHE B 15 SHEET 6 A 7 TYR C 18 ILE C 22 -1 N LEU C 21 O PHE C 29 SHEET 7 A 7 GLU C 59 ASN C 61 1 O VAL C 60 N LYS C 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1