data_2K0B # _entry.id 2K0B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2K0B pdb_00002k0b 10.2210/pdb2k0b/pdb RCSB RCSB100514 ? ? WWPDB D_1000100514 ? ? # _pdbx_database_related.db_id 15591 _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Assigned NMR chemical shifts' _pdbx_database_related.content_type unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2K0B _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-01-31 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Long, J.E.' 1 'Ciani, B.' 2 'Gallagher, T.R.A.' 3 'Cavey, J.R.' 4 'Sheppard, P.W.' 5 'Layfield, R.' 6 'Searle, M.S.' 7 # _citation.id primary _citation.title 'Conformation and dynamics of the three-helix bundle UBA domain of p62 from experiment and simulation.' _citation.journal_abbrev Proteins _citation.journal_volume 71 _citation.page_first 227 _citation.page_last 240 _citation.year 2007 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17932931 _citation.pdbx_database_id_DOI 10.1002/prot.21692 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Evans, C.L.' 1 ? primary 'Long, J.E.' 2 ? primary 'Gallagher, T.R.' 3 ? primary 'Hirst, J.D.' 4 ? primary 'Searle, M.S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Sequestosome-1 _entity.formula_weight 5744.406 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UBA domain (UNP residues 387-436)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa, Ubiquitin-binding protein p62, EBI3-associated protein of 60 kDa, p60, EBIAP ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKH _entity_poly.pdbx_seq_one_letter_code_can GSPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKH _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 PRO n 1 5 GLU n 1 6 ALA n 1 7 ASP n 1 8 PRO n 1 9 ARG n 1 10 LEU n 1 11 ILE n 1 12 GLU n 1 13 SER n 1 14 LEU n 1 15 SER n 1 16 GLN n 1 17 MET n 1 18 LEU n 1 19 SER n 1 20 MET n 1 21 GLY n 1 22 PHE n 1 23 SER n 1 24 ASP n 1 25 GLU n 1 26 GLY n 1 27 GLY n 1 28 TRP n 1 29 LEU n 1 30 THR n 1 31 ARG n 1 32 LEU n 1 33 LEU n 1 34 GLN n 1 35 THR n 1 36 LYS n 1 37 ASN n 1 38 TYR n 1 39 ASP n 1 40 ILE n 1 41 GLY n 1 42 ALA n 1 43 ALA n 1 44 LEU n 1 45 ASP n 1 46 THR n 1 47 ILE n 1 48 GLN n 1 49 TYR n 1 50 SER n 1 51 LYS n 1 52 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'SQSTM1, ORCA, OSIL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SQSTM_HUMAN _struct_ref.pdbx_db_accession Q13501 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKH _struct_ref.pdbx_align_begin 387 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2K0B _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 52 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13501 _struct_ref_seq.db_align_beg 387 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 436 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 52 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2K0B GLY X 1 ? UNP Q13501 ? ? 'expression tag' 1 1 1 2K0B SER X 2 ? UNP Q13501 ? ? 'expression tag' 2 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-15N NOESY' 1 3 2 '2D 1H-13C HSQC' 1 4 2 '3D CBCA(CO)NH' 1 5 2 '3D HNCACB' 1 6 2 '3D HNCO' 1 7 2 '3D HN(CA)CO' 1 8 2 '3D HCCH-TOCSY' 1 9 2 '3D 1H-13C NOESY' 1 10 1 '3D 1H-15N TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 15N] Sequestosome-1, 50 mM potassium phosphate, 50 mM sodium chloride, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 13C; U-100% 15N] Sequestosome-1, 50 mM potassium phosphate, 50 mM sodium chloride, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2K0B _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 30 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2K0B _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2K0B _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' 2.14 1 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS ? 2 'Bruker Biospin' collection XwinNMR ? 3 'Bruker Biospin' processing XwinNMR ? 4 CCPN 'chemical shift assignment' CcpNMR 1.0.10 5 CCPN 'data analysis' CcpNMR 1.0.10 6 CCPN 'peak picking' CcpNMR 1.0.10 7 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 2.14 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2K0B _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2K0B _struct.title 'NMR structure of the UBA domain of p62 (SQSTM1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2K0B _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;ubiquitin binding, helical bundle, three helices, Alternative splicing, Apoptosis, Cytoplasm, Differentiation, Disease mutation, Endosome, Immune response, Metal-binding, Nucleus, Phosphoprotein, Polymorphism, Zinc, Zinc-finger, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 9 ? GLY A 21 ? ARG X 9 GLY X 21 1 ? 13 HELX_P HELX_P2 2 TRP A 28 ? LYS A 36 ? TRP X 28 LYS X 36 1 ? 9 HELX_P HELX_P3 3 ASP A 39 ? ILE A 47 ? ASP X 39 ILE X 47 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2K0B _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY X . n A 1 2 SER 2 2 2 SER SER X . n A 1 3 PRO 3 3 3 PRO PRO X . n A 1 4 PRO 4 4 4 PRO PRO X . n A 1 5 GLU 5 5 5 GLU GLU X . n A 1 6 ALA 6 6 6 ALA ALA X . n A 1 7 ASP 7 7 7 ASP ASP X . n A 1 8 PRO 8 8 8 PRO PRO X . n A 1 9 ARG 9 9 9 ARG ARG X . n A 1 10 LEU 10 10 10 LEU LEU X . n A 1 11 ILE 11 11 11 ILE ILE X . n A 1 12 GLU 12 12 12 GLU GLU X . n A 1 13 SER 13 13 13 SER SER X . n A 1 14 LEU 14 14 14 LEU LEU X . n A 1 15 SER 15 15 15 SER SER X . n A 1 16 GLN 16 16 16 GLN GLN X . n A 1 17 MET 17 17 17 MET MET X . n A 1 18 LEU 18 18 18 LEU LEU X . n A 1 19 SER 19 19 19 SER SER X . n A 1 20 MET 20 20 20 MET MET X . n A 1 21 GLY 21 21 21 GLY GLY X . n A 1 22 PHE 22 22 22 PHE PHE X . n A 1 23 SER 23 23 23 SER SER X . n A 1 24 ASP 24 24 24 ASP ASP X . n A 1 25 GLU 25 25 25 GLU GLU X . n A 1 26 GLY 26 26 26 GLY GLY X . n A 1 27 GLY 27 27 27 GLY GLY X . n A 1 28 TRP 28 28 28 TRP TRP X . n A 1 29 LEU 29 29 29 LEU LEU X . n A 1 30 THR 30 30 30 THR THR X . n A 1 31 ARG 31 31 31 ARG ARG X . n A 1 32 LEU 32 32 32 LEU LEU X . n A 1 33 LEU 33 33 33 LEU LEU X . n A 1 34 GLN 34 34 34 GLN GLN X . n A 1 35 THR 35 35 35 THR THR X . n A 1 36 LYS 36 36 36 LYS LYS X . n A 1 37 ASN 37 37 37 ASN ASN X . n A 1 38 TYR 38 38 38 TYR TYR X . n A 1 39 ASP 39 39 39 ASP ASP X . n A 1 40 ILE 40 40 40 ILE ILE X . n A 1 41 GLY 41 41 41 GLY GLY X . n A 1 42 ALA 42 42 42 ALA ALA X . n A 1 43 ALA 43 43 43 ALA ALA X . n A 1 44 LEU 44 44 44 LEU LEU X . n A 1 45 ASP 45 45 45 ASP ASP X . n A 1 46 THR 46 46 46 THR THR X . n A 1 47 ILE 47 47 47 ILE ILE X . n A 1 48 GLN 48 48 48 GLN GLN X . n A 1 49 TYR 49 49 49 TYR TYR X . n A 1 50 SER 50 50 50 SER SER X . n A 1 51 LYS 51 51 51 LYS LYS X . n A 1 52 HIS 52 52 52 HIS HIS X . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Sequestosome-1 1 mM '[U-100% 15N]' 1 'potassium phosphate' 50 mM ? 1 'sodium chloride' 50 mM ? 1 Sequestosome-1 1 mM '[U-100% 13C; U-100% 15N]' 2 'potassium phosphate' 50 mM ? 2 'sodium chloride' 50 mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2K0B _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1078 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 360 _pdbx_nmr_constraints.NOE_long_range_total_count 213 _pdbx_nmr_constraints.NOE_medium_range_total_count 246 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 259 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 36 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 36 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O X TRP 28 ? ? H X LEU 32 ? ? 1.59 2 6 HB2 X MET 17 ? ? HB2 X PHE 22 ? ? 1.31 3 10 HB2 X MET 17 ? ? HB2 X PHE 22 ? ? 1.20 4 13 HB3 X ASP 24 ? ? HB3 X LEU 29 ? ? 1.34 5 19 HB2 X PRO 4 ? ? HB2 X ASP 7 ? ? 1.30 6 23 HB2 X MET 17 ? ? HB2 X PHE 22 ? ? 1.28 7 26 HB3 X GLU 25 ? ? HE1 X TRP 28 ? ? 1.31 8 26 O X TRP 28 ? ? H X LEU 32 ? ? 1.58 9 29 HG3 X GLU 25 ? ? HE1 X TRP 28 ? ? 1.11 10 29 O X TRP 28 ? ? H X LEU 32 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO X 4 ? ? -75.08 41.18 2 1 GLU X 5 ? ? -158.12 12.59 3 1 ALA X 6 ? ? -173.19 26.64 4 1 SER X 23 ? ? -151.31 -148.71 5 1 GLU X 25 ? ? -82.90 43.26 6 1 TYR X 38 ? ? 63.18 76.62 7 1 ILE X 47 ? ? -81.94 45.44 8 1 GLN X 48 ? ? 88.33 15.63 9 1 SER X 50 ? ? -76.29 20.96 10 1 LYS X 51 ? ? -167.91 118.54 11 2 PRO X 4 ? ? -72.87 33.87 12 2 ALA X 6 ? ? -173.58 26.80 13 2 SER X 23 ? ? -156.96 -134.86 14 2 GLU X 25 ? ? -97.61 55.11 15 2 ARG X 31 ? ? -94.99 -61.98 16 2 LEU X 32 ? ? -47.16 -72.37 17 2 GLN X 48 ? ? -159.80 -35.92 18 2 TYR X 49 ? ? -80.90 34.96 19 3 ALA X 6 ? ? 81.73 48.93 20 3 GLN X 48 ? ? -166.42 -41.56 21 3 TYR X 49 ? ? -75.70 -158.48 22 3 SER X 50 ? ? -160.88 21.83 23 4 PRO X 4 ? ? -75.25 25.91 24 4 GLU X 25 ? ? -100.96 65.17 25 4 GLN X 34 ? ? -37.98 -71.27 26 4 LYS X 36 ? ? -88.01 37.07 27 4 TYR X 38 ? ? 68.57 73.90 28 4 ILE X 47 ? ? -101.95 44.33 29 4 SER X 50 ? ? -82.15 47.65 30 4 LYS X 51 ? ? -165.38 78.71 31 5 PRO X 4 ? ? -69.88 37.50 32 5 GLU X 5 ? ? -146.93 13.11 33 5 ALA X 6 ? ? -179.17 41.62 34 5 ILE X 47 ? ? -88.05 43.30 35 5 GLN X 48 ? ? 85.88 38.13 36 6 PRO X 4 ? ? -72.19 40.77 37 6 GLU X 5 ? ? -151.73 13.06 38 6 ALA X 6 ? ? -157.09 21.38 39 6 GLU X 12 ? ? -94.77 -60.74 40 6 LYS X 36 ? ? -78.30 37.92 41 6 TYR X 38 ? ? 59.78 77.86 42 6 GLN X 48 ? ? -166.89 -34.95 43 6 SER X 50 ? ? -153.06 16.77 44 7 PRO X 4 ? ? -73.02 37.77 45 7 ALA X 6 ? ? -177.09 35.85 46 7 SER X 23 ? ? -152.47 -149.28 47 7 GLU X 25 ? ? -115.69 68.05 48 7 LYS X 36 ? ? -81.74 37.14 49 7 TYR X 38 ? ? 61.72 67.93 50 7 GLN X 48 ? ? -157.49 -48.84 51 8 PRO X 8 ? ? -39.07 -25.41 52 8 ILE X 47 ? ? -100.72 42.93 53 8 GLN X 48 ? ? 89.49 -6.93 54 8 TYR X 49 ? ? -112.26 73.33 55 9 PRO X 4 ? ? -74.70 34.23 56 9 GLU X 5 ? ? -146.39 15.20 57 9 ALA X 6 ? ? -169.55 51.05 58 9 GLU X 12 ? ? -93.73 -64.19 59 9 SER X 23 ? ? -158.59 -91.57 60 9 LEU X 32 ? ? -52.07 -70.34 61 9 TYR X 38 ? ? 60.05 78.01 62 9 GLN X 48 ? ? -164.04 -35.90 63 9 SER X 50 ? ? -155.28 35.54 64 10 PRO X 4 ? ? -77.18 42.64 65 10 GLU X 5 ? ? -142.56 10.99 66 10 ALA X 6 ? ? -174.29 44.00 67 10 SER X 23 ? ? -151.51 -116.89 68 10 GLN X 48 ? ? -161.22 -42.58 69 10 SER X 50 ? ? -169.29 86.43 70 10 LYS X 51 ? ? 83.82 62.57 71 11 PRO X 4 ? ? -74.42 35.65 72 11 GLU X 5 ? ? -162.32 23.45 73 11 ALA X 6 ? ? 179.11 28.63 74 11 GLU X 12 ? ? -93.65 -62.61 75 11 SER X 23 ? ? -139.78 -143.25 76 11 TYR X 38 ? ? 65.96 66.22 77 11 ILE X 47 ? ? -84.09 42.55 78 11 GLN X 48 ? ? 84.67 7.55 79 11 SER X 50 ? ? -81.13 43.63 80 12 PRO X 4 ? ? -75.63 38.12 81 12 GLU X 5 ? ? -153.48 15.24 82 12 ALA X 6 ? ? -162.78 24.72 83 12 LEU X 32 ? ? -64.85 -77.54 84 12 LYS X 36 ? ? -87.81 38.71 85 12 TYR X 38 ? ? 58.74 71.35 86 12 GLN X 48 ? ? -173.94 -45.37 87 13 ALA X 6 ? ? -162.64 46.55 88 13 GLU X 12 ? ? -95.05 -64.95 89 13 SER X 23 ? ? -140.04 -159.43 90 13 TYR X 38 ? ? 66.94 77.76 91 13 ILE X 47 ? ? -82.78 44.66 92 13 GLN X 48 ? ? 82.68 25.50 93 14 PRO X 4 ? ? -71.64 22.94 94 14 ALA X 6 ? ? -172.98 37.95 95 14 LYS X 36 ? ? -95.57 37.40 96 14 ASN X 37 ? ? 61.98 61.01 97 14 ILE X 47 ? ? -83.97 42.78 98 15 GLU X 12 ? ? -96.56 -66.49 99 15 LYS X 36 ? ? -93.38 40.28 100 15 TYR X 38 ? ? 64.37 73.39 101 15 ILE X 47 ? ? -106.24 43.30 102 15 GLN X 48 ? ? 85.05 22.86 103 16 PRO X 4 ? ? -51.92 91.18 104 16 GLU X 5 ? ? 156.93 -23.82 105 16 ARG X 31 ? ? -96.33 -60.24 106 16 LEU X 32 ? ? -49.31 -72.63 107 16 TYR X 38 ? ? 63.83 70.15 108 16 GLN X 48 ? ? -167.74 -39.09 109 16 TYR X 49 ? ? -78.87 -159.22 110 16 SER X 50 ? ? -178.73 41.76 111 17 PRO X 4 ? ? -78.29 44.13 112 17 GLU X 5 ? ? -162.33 26.32 113 17 ALA X 6 ? ? -174.32 42.42 114 17 SER X 23 ? ? -134.83 -128.15 115 17 ARG X 31 ? ? -97.33 -66.07 116 17 LEU X 32 ? ? -46.92 -73.47 117 17 TYR X 38 ? ? 72.34 73.25 118 17 GLN X 48 ? ? -155.59 -44.75 119 17 TYR X 49 ? ? -84.01 49.86 120 18 PRO X 4 ? ? -74.25 21.66 121 18 ALA X 6 ? ? -166.81 50.72 122 18 GLU X 25 ? ? -119.24 78.98 123 18 LYS X 36 ? ? -95.33 33.67 124 18 TYR X 38 ? ? 66.94 69.90 125 18 GLN X 48 ? ? -157.31 -53.36 126 18 SER X 50 ? ? 174.75 71.98 127 19 PRO X 8 ? ? -48.28 -13.37 128 19 SER X 23 ? ? -161.38 -163.35 129 19 TYR X 38 ? ? 71.27 71.46 130 19 GLN X 48 ? ? -165.79 -48.01 131 20 PRO X 4 ? ? -69.18 29.85 132 20 ALA X 6 ? ? -150.96 25.00 133 20 GLU X 25 ? ? -102.64 58.25 134 20 ILE X 47 ? ? -79.93 43.91 135 20 TYR X 49 ? ? -105.30 55.34 136 20 LYS X 51 ? ? -125.74 -129.22 137 21 PRO X 4 ? ? -75.42 37.18 138 21 ALA X 6 ? ? -168.60 37.50 139 21 GLU X 25 ? ? -116.35 65.85 140 21 LYS X 36 ? ? -97.45 37.55 141 21 ILE X 47 ? ? -96.75 42.28 142 21 GLN X 48 ? ? 80.94 30.82 143 22 ALA X 6 ? ? 80.01 50.43 144 22 SER X 13 ? ? -98.56 -61.03 145 22 SER X 23 ? ? -154.65 -138.01 146 22 TYR X 38 ? ? 64.69 69.39 147 22 GLN X 48 ? ? -163.28 -43.65 148 22 TYR X 49 ? ? -78.03 34.58 149 22 SER X 50 ? ? -98.19 36.47 150 23 PRO X 4 ? ? -71.70 24.08 151 23 GLU X 5 ? ? -143.35 18.03 152 23 ALA X 6 ? ? -170.17 15.19 153 23 PRO X 8 ? ? -38.78 -28.48 154 23 ARG X 31 ? ? -96.36 -62.26 155 23 LYS X 36 ? ? -94.63 39.30 156 23 ASN X 37 ? ? 31.82 53.12 157 23 GLN X 48 ? ? -153.64 -26.68 158 23 TYR X 49 ? ? -101.33 54.70 159 24 ALA X 6 ? ? -154.95 36.37 160 24 SER X 23 ? ? -140.90 -136.71 161 24 TYR X 38 ? ? 64.04 67.89 162 24 GLN X 48 ? ? -161.19 -59.35 163 24 TYR X 49 ? ? -69.96 -179.15 164 24 SER X 50 ? ? -153.33 26.42 165 25 SER X 23 ? ? -159.28 -135.28 166 25 GLU X 25 ? ? -87.37 48.47 167 25 LYS X 36 ? ? -96.56 39.38 168 25 TYR X 38 ? ? 59.89 74.12 169 25 GLN X 48 ? ? -158.74 -58.32 170 25 SER X 50 ? ? -82.06 49.89 171 26 PRO X 4 ? ? -70.92 38.48 172 26 ALA X 6 ? ? 173.25 66.20 173 26 TYR X 38 ? ? 60.80 68.25 174 26 ILE X 47 ? ? -83.78 43.67 175 26 GLN X 48 ? ? 82.14 34.07 176 26 TYR X 49 ? ? -146.16 55.36 177 26 SER X 50 ? ? -91.84 54.05 178 27 PRO X 4 ? ? -69.95 24.00 179 27 GLU X 5 ? ? -143.58 15.45 180 27 ALA X 6 ? ? -167.74 31.32 181 27 LYS X 36 ? ? -90.98 37.30 182 27 GLN X 48 ? ? 153.95 -5.66 183 27 LYS X 51 ? ? 72.46 68.54 184 28 PRO X 4 ? ? -82.14 32.90 185 28 ALA X 6 ? ? -179.42 31.91 186 28 GLU X 25 ? ? -107.50 57.30 187 28 ILE X 47 ? ? -83.34 42.64 188 28 LYS X 51 ? ? -140.86 21.25 189 29 PRO X 4 ? ? -71.31 30.65 190 29 ALA X 6 ? ? -165.99 28.35 191 29 PRO X 8 ? ? -47.19 -14.60 192 29 SER X 23 ? ? -158.72 -123.51 193 29 LEU X 32 ? ? -50.12 -71.99 194 29 GLN X 48 ? ? -165.61 -32.07 195 29 TYR X 49 ? ? -77.88 42.31 196 30 PRO X 4 ? ? -73.80 24.39 197 30 GLU X 5 ? ? -141.05 13.49 198 30 ALA X 6 ? ? -162.57 21.75 199 30 GLU X 12 ? ? -95.91 -62.29 200 30 ARG X 31 ? ? -95.92 -65.47 201 30 ASN X 37 ? ? 136.87 15.86 202 30 TYR X 38 ? ? 72.42 56.25 203 30 ILE X 47 ? ? -102.63 43.91 204 30 GLN X 48 ? ? 82.00 33.45 205 30 TYR X 49 ? ? -141.58 58.16 #