HEADER SIGNALING PROTEIN 18-MAR-08 2K20 TITLE SOLUTION STRUCTURE OF PAR-3 PDZ3 IN COMPLEX WITH PTEN PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PARTITIONING-DEFECTIVE 3 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ 3 DOMAIN; COMPND 5 SYNONYM: PARD-3, PAR-3, ATYPICAL PKC ISOTYPE-SPECIFIC-INTERACTING COMPND 6 PROTEIN, ASIP, ATYPICAL PKC-SPECIFIC-BINDING PROTEIN, ASBP; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN TYROSINE PHOSPHATASE AND TENSIN HOMOLOG; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 393-403; COMPND 12 SYNONYM: PROTEIN TYROSINE PHOSPHATASE AND TENSIN-LIKE PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 GENE: PARD3, PAR3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET32A; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 10 ORGANISM_COMMON: RAT; SOURCE 11 GENE: PTEN, PTEN/MMAC1; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS PAR-3, PTEN, PDZ DOMAIN, SCAFFOLD PROTEIN, CELL POLARITY, ALTERNATIVE KEYWDS 2 SPLICING, CELL CYCLE, CELL DIVISION, CELL JUNCTION, COILED COIL, KEYWDS 3 MEMBRANE, PHOSPHOPROTEIN, TIGHT JUNCTION, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 MDLTYP MINIMIZED AVERAGE AUTHOR W.FENG,H.WU,L.CHAN,M.ZHANG REVDAT 4 29-MAY-24 2K20 1 REMARK REVDAT 3 16-MAR-22 2K20 1 REMARK REVDAT 2 24-FEB-09 2K20 1 VERSN REVDAT 1 10-JUN-08 2K20 0 JRNL AUTH W.FENG,H.WU,L.CHAN,M.ZHANG JRNL TITL SOLUTION STRUCTURE OF PAR-3 PDZ3 IN COMPLEX WITH PTEN JRNL TITL 2 PEPTIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K20 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000100575. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 1 MM PAR-3 PDZ3/PTEN PEPTIDE, REMARK 210 100% D2O; 1 MM [U-100% 15N] PAR- REMARK 210 3 PDZ3/PTEN PEPTIDE, 90% H2O/10% REMARK 210 D2O; 1 MM [U-100% 13C; U-100% REMARK 210 15N] PAR-3 PDZ3/PTEN PEPTIDE, 90% REMARK 210 H2O/10% D2O; 1 MM [U-100% 13C; REMARK 210 U-100% 15N] PAR-3 PDZ3/PTEN REMARK 210 PEPTIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 3D 1H-15N NOESY; REMARK 210 3D HNCACB; 3D CBCA(CO)NH; 3D REMARK 210 HNCO; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, PIPP, CNS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 19 -32.15 -39.02 REMARK 500 1 LEU A 26 -32.86 -179.72 REMARK 500 1 VAL A 46 104.46 -54.94 REMARK 500 1 SER A 48 119.16 -168.95 REMARK 500 1 ILE A 50 107.17 -59.52 REMARK 500 1 ASN A 51 78.63 -61.17 REMARK 500 1 ASN A 64 13.56 87.27 REMARK 500 1 THR A 93 -33.04 -156.06 REMARK 500 1 SER B 8 -165.77 -65.31 REMARK 500 1 GLN B 9 147.14 178.75 REMARK 500 2 THR A 8 24.16 -143.03 REMARK 500 2 LEU A 26 -27.85 -178.80 REMARK 500 2 GLU A 37 -78.68 -81.58 REMARK 500 2 VAL A 46 106.36 -54.54 REMARK 500 2 ASN A 51 69.86 -68.23 REMARK 500 2 ASN A 64 -10.46 88.11 REMARK 500 2 THR A 93 -37.99 -153.28 REMARK 500 2 GLN B 6 114.80 74.34 REMARK 500 2 HIS B 7 80.58 63.02 REMARK 500 2 SER B 8 -93.58 -81.46 REMARK 500 2 GLN B 9 154.79 167.15 REMARK 500 3 LEU A 26 -33.04 178.79 REMARK 500 3 SER A 48 119.64 -166.48 REMARK 500 3 ILE A 50 106.60 -55.72 REMARK 500 3 ASN A 51 74.20 -64.64 REMARK 500 3 ASN A 64 17.41 89.91 REMARK 500 3 THR A 93 -31.23 -162.19 REMARK 500 3 GLU A 94 -72.49 -111.62 REMARK 500 3 ASP B 5 31.75 -98.90 REMARK 500 3 GLN B 6 81.53 60.94 REMARK 500 3 HIS B 7 102.63 58.89 REMARK 500 3 SER B 8 -87.96 -101.72 REMARK 500 3 GLN B 9 151.71 170.21 REMARK 500 4 ASN A 19 -31.06 -39.86 REMARK 500 4 LEU A 26 -29.10 178.47 REMARK 500 4 VAL A 46 107.20 -54.70 REMARK 500 4 ASN A 51 70.98 -66.13 REMARK 500 4 ASN A 64 -10.47 89.76 REMARK 500 4 LEU A 76 93.13 -52.20 REMARK 500 4 THR A 93 -22.22 -171.71 REMARK 500 4 GLU A 94 -59.00 -127.90 REMARK 500 4 GLN B 6 169.33 60.83 REMARK 500 4 SER B 8 -175.00 -68.00 REMARK 500 5 ASN A 19 -31.72 -38.60 REMARK 500 5 LEU A 26 -36.89 -175.12 REMARK 500 5 GLU A 37 -72.18 -85.46 REMARK 500 5 ASN A 38 -162.45 -106.23 REMARK 500 5 HIS A 39 33.11 -93.76 REMARK 500 5 ASP A 41 106.46 -54.60 REMARK 500 5 ASN A 51 76.64 -64.28 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2K1Z RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PAR-3 PDZ3 DBREF 2K20 A 7 110 UNP Q9Z340 PARD3_RAT 582 685 DBREF 2K20 B 3 13 UNP O54857 O54857_RAT 393 403 SEQRES 1 A 104 GLY THR ARG GLU PHE LEU THR PHE GLU VAL PRO LEU ASN SEQRES 2 A 104 ASP SER GLY SER ALA GLY LEU GLY VAL SER VAL LYS GLY SEQRES 3 A 104 ASN ARG SER LYS GLU ASN HIS ALA ASP LEU GLY ILE PHE SEQRES 4 A 104 VAL LYS SER ILE ILE ASN GLY GLY ALA ALA SER LYS ASP SEQRES 5 A 104 GLY ARG LEU ARG VAL ASN ASP GLN LEU ILE ALA VAL ASN SEQRES 6 A 104 GLY GLU SER LEU LEU GLY LYS ALA ASN GLN GLU ALA MET SEQRES 7 A 104 GLU THR LEU ARG ARG SER MET SER THR GLU GLY ASN LYS SEQRES 8 A 104 ARG GLY MET ILE GLN LEU ILE VAL ALA ARG ARG ILE SER SEQRES 1 B 11 ASP GLU ASP GLN HIS SER GLN ILE THR LYS VAL HELIX 1 1 GLY A 53 GLY A 59 1 7 HELIX 2 2 ALA A 79 SER A 92 1 14 SHEET 1 A 4 ARG A 9 PRO A 17 0 SHEET 2 A 4 MET A 100 ARG A 108 -1 O VAL A 105 N LEU A 12 SHEET 3 A 4 GLN A 66 VAL A 70 -1 N ILE A 68 O ILE A 104 SHEET 4 A 4 GLU A 73 SER A 74 -1 O GLU A 73 N VAL A 70 SHEET 1 B 3 ASP A 41 ILE A 49 0 SHEET 2 B 3 VAL A 28 ARG A 34 -1 N SER A 29 O LYS A 47 SHEET 3 B 3 THR B 11 VAL B 13 -1 O VAL B 13 N VAL A 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1