HEADER MEMBRANE PROTEIN 14-MAY-08 2K3M TITLE RV1761C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RV1761C; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MT1810, RV1761C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTBSG1; SOURCE 11 OTHER_DETAILS: LIGATION INDEPENDENT CLONING VECTOR PRODUCING N- SOURCE 12 TERMINAL HIS6 TAG KEYWDS PROTEIN, INTEGRAL MEMBRANE PROTEIN, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR R.C.PAGE,J.D.MOORE,S.LEE,S.J.OPELLA,T.A.CROSS REVDAT 4 20-OCT-21 2K3M 1 REMARK SEQADV LINK REVDAT 3 19-JUN-13 2K3M 1 JRNL REVDAT 2 13-JUL-11 2K3M 1 VERSN REVDAT 1 06-JAN-09 2K3M 0 JRNL AUTH R.C.PAGE,S.LEE,J.D.MOORE,S.J.OPELLA,T.A.CROSS JRNL TITL BACKBONE STRUCTURE OF A SMALL HELICAL INTEGRAL MEMBRANE JRNL TITL 2 PROTEIN: A UNIQUE STRUCTURAL CHARACTERIZATION. JRNL REF PROTEIN SCI. V. 18 134 2009 JRNL REFN ISSN 0961-8368 JRNL PMID 19177358 JRNL DOI 10.1002/PRO.24 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR NIH 2.18 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000100633. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 323 REMARK 210 PH : 4 REMARK 210 IONIC STRENGTH : 170 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM [U-100% 15N] RV1761C, 0.4 REMARK 210 MM CYSP, 10 % D2O, 90 % H2O, 20 MM SODIUM ACETATE, 150 MM DPC, REMARK 210 90% H2O/10% D2O; 0.4 MM [U-100% 15N] RV1761C, 0.4 MM CYSP, 10 % REMARK 210 D2O, 90 % H2O, 20 MM SODIUM ACETATE, 150 MM DPC, 90% H2O/10% D2O; REMARK 210 0.4 MM [U-100% 15N] RV1761C, 0.4 MM CYSP, 10 % D2O, 90 % H2O, REMARK 210 20 MM SODIUM ACETATE, 150 MM DPC, 90% H2O/10% D2O; 1 MM [U-100% REMARK 210 13C; U-100% 15N] RV1761C, 10 % D2O, 90 % H2O, 20 MM SODIUM REMARK 210 ACETATE, 150 MM DPC, 90% H2O/10% D2O; 1 MM [U-100% 15N] RV1761C, REMARK 210 10 % D2O, 90 % H2O, 20 MM SODIUM ACETATE, 150 MM DPC, 90% H2O/10% REMARK 210 D2O; 1 MM [U-100% 15N] RV1761C, 10 % D2O, 90 % H2O, 20 MM REMARK 210 SODIUM ACETATE, 150 MM DPC, 5 % POLYACRYLAMIDE GEL, 90% H2O/10% REMARK 210 D2O; 1 MM [U-100% 15N] RV1761C, 10 % D2O, 90 % H2O, 20 MM SODIUM REMARK 210 ACETATE, 150 MM DPC, 4.4 % POLYACRYLAMIDE GEL, 1.1 % 2- REMARK 210 ACRYLAMIDO-2-METHYL-1-PROPANESULFONIC ACID, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCACB; 3D HN(CO)CA; 3D REMARK 210 CBCA(CO)NH; 3D 1H-15N NOESY; 2D REMARK 210 1H-15N HSQC-IPAP REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 720 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, X-PLOR NIH 2.18, VNMR, REMARK 210 XWINNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-30 REMARK 465 RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 92 H ALA A 96 1.22 REMARK 500 O LEU A 97 H ILE A 100 1.29 REMARK 500 O THR A 6 H SER A 10 1.37 REMARK 500 O ALA A 96 H GLN A 99 1.45 REMARK 500 O ILE A 100 H TYR A 104 1.48 REMARK 500 O ALA A 14 H VAL A 18 1.50 REMARK 500 O GLU A 61 H ASP A 65 1.52 REMARK 500 O GLY A 90 H LEU A 93 1.53 REMARK 500 O VAL A 62 H GLY A 66 1.54 REMARK 500 O ALA A 115 H LEU A 119 1.55 REMARK 500 O ILE A 112 H ILE A 116 1.56 REMARK 500 O PRO A 20 H ALA A 24 1.57 REMARK 500 O VAL A 13 H LEU A 17 1.57 REMARK 500 O ALA A 71 N MET A 73 2.05 REMARK 500 O HIS A 92 N ALA A 96 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 19 TYR A 104 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 94.37 166.07 REMARK 500 1 LEU A 33 84.08 87.43 REMARK 500 1 ILE A 37 115.35 126.97 REMARK 500 1 PRO A 40 -82.73 -72.22 REMARK 500 1 ARG A 43 18.04 -61.65 REMARK 500 1 PHE A 46 90.41 127.10 REMARK 500 1 ARG A 47 156.49 121.09 REMARK 500 1 CYS A 48 68.85 67.74 REMARK 500 1 GLN A 54 80.41 -63.41 REMARK 500 1 ALA A 70 -84.36 -74.58 REMARK 500 1 ALA A 71 16.28 -56.37 REMARK 500 1 HIS A 72 -29.32 -17.92 REMARK 500 1 ASN A 75 -18.24 -36.42 REMARK 500 1 VAL A 78 -33.12 -36.25 REMARK 500 1 GLU A 81 -72.69 -91.15 REMARK 500 1 LEU A 84 -14.74 -42.75 REMARK 500 1 GLU A 87 25.85 -63.82 REMARK 500 1 VAL A 89 36.90 -84.31 REMARK 500 1 ALA A 96 28.00 -68.49 REMARK 500 1 ALA A 106 109.37 67.20 REMARK 500 1 THR A 107 -63.69 -134.66 REMARK 500 1 VAL A 108 23.61 -67.16 REMARK 500 1 THR A 121 -44.62 161.90 REMARK 500 1 THR A 123 81.11 -56.95 REMARK 500 2 ASP A 3 114.96 163.14 REMARK 500 2 THR A 6 -152.70 -116.72 REMARK 500 2 LEU A 33 94.43 90.32 REMARK 500 2 ILE A 37 115.49 107.72 REMARK 500 2 ARG A 43 22.54 -62.13 REMARK 500 2 PHE A 46 106.67 110.40 REMARK 500 2 ARG A 47 150.61 102.67 REMARK 500 2 CYS A 48 67.49 60.84 REMARK 500 2 PRO A 50 52.59 -62.12 REMARK 500 2 GLU A 51 44.38 29.72 REMARK 500 2 ILE A 53 135.68 -37.66 REMARK 500 2 LEU A 68 -29.16 -35.45 REMARK 500 2 ALA A 70 -71.43 -76.96 REMARK 500 2 ALA A 71 0.39 -45.07 REMARK 500 2 HIS A 72 -62.67 -22.09 REMARK 500 2 ASN A 75 -19.37 -36.81 REMARK 500 2 VAL A 78 -36.86 -34.86 REMARK 500 2 ALA A 83 -70.47 3.35 REMARK 500 2 LEU A 84 -44.68 -26.78 REMARK 500 2 GLU A 87 24.84 -60.54 REMARK 500 2 PRO A 91 -13.19 -44.06 REMARK 500 2 ALA A 96 -12.14 -46.33 REMARK 500 2 LEU A 97 -53.76 1.17 REMARK 500 2 ALA A 106 66.62 66.46 REMARK 500 2 THR A 121 -17.97 -161.36 REMARK 500 2 THR A 123 95.40 -33.43 REMARK 500 REMARK 500 THIS ENTRY HAS 761 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MTN A 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MTN A 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MTN A 130 DBREF 2K3M A 1 127 UNP O06796 O06796_MYCTU 1 127 SEQADV 2K3M MET A -23 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -22 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -21 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -20 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -19 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -18 UNP O06796 EXPRESSION TAG SEQADV 2K3M HIS A -17 UNP O06796 EXPRESSION TAG SEQADV 2K3M SER A -16 UNP O06796 EXPRESSION TAG SEQADV 2K3M SER A -15 UNP O06796 EXPRESSION TAG SEQADV 2K3M GLY A -14 UNP O06796 EXPRESSION TAG SEQADV 2K3M VAL A -13 UNP O06796 EXPRESSION TAG SEQADV 2K3M ASP A -12 UNP O06796 EXPRESSION TAG SEQADV 2K3M LEU A -11 UNP O06796 EXPRESSION TAG SEQADV 2K3M GLY A -10 UNP O06796 EXPRESSION TAG SEQADV 2K3M THR A -9 UNP O06796 EXPRESSION TAG SEQADV 2K3M GLU A -8 UNP O06796 EXPRESSION TAG SEQADV 2K3M ASN A -7 UNP O06796 EXPRESSION TAG SEQADV 2K3M LEU A -6 UNP O06796 EXPRESSION TAG SEQADV 2K3M TYR A -5 UNP O06796 EXPRESSION TAG SEQADV 2K3M PHE A -4 UNP O06796 EXPRESSION TAG SEQADV 2K3M GLN A -3 UNP O06796 EXPRESSION TAG SEQADV 2K3M SER A -2 UNP O06796 EXPRESSION TAG SEQADV 2K3M ASN A -1 UNP O06796 EXPRESSION TAG SEQADV 2K3M ALA A 0 UNP O06796 EXPRESSION TAG SEQADV 2K3M CYS A 30 UNP O06796 PHE 30 ENGINEERED MUTATION SEQADV 2K3M CYS A 48 UNP O06796 SER 48 ENGINEERED MUTATION SEQADV 2K3M CYS A 102 UNP O06796 SER 102 ENGINEERED MUTATION SEQRES 1 A 151 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 151 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET SER SEQRES 3 A 151 ASP PHE ASP THR GLU ARG VAL SER ARG ALA VAL ALA ALA SEQRES 4 A 151 ALA LEU VAL GLY PRO GLY GLY VAL ALA LEU VAL VAL LYS SEQRES 5 A 151 VAL CYS ALA GLY LEU PRO GLY VAL ILE HIS THR PRO ALA SEQRES 6 A 151 ARG ARG GLY PHE PHE ARG CYS ASN PRO GLU ARG ILE GLN SEQRES 7 A 151 ILE GLY ASP TRP ARG TYR GLU VAL ALA HIS ASP GLY ARG SEQRES 8 A 151 LEU LEU ALA ALA HIS MET VAL ASN GLY ILE VAL ILE ALA SEQRES 9 A 151 GLU ASP ALA LEU ILE ALA GLU ALA VAL GLY PRO HIS LEU SEQRES 10 A 151 ALA ARG ALA LEU GLY GLN ILE VAL CYS ARG TYR GLY ALA SEQRES 11 A 151 THR VAL ILE PRO ASN ILE ASN ALA ALA ILE GLU VAL LEU SEQRES 12 A 151 GLY THR GLY THR ASP TYR ARG PHE HET MTN A 128 27 HET MTN A 129 27 HET MTN A 130 27 HETNAM MTN S-[(1-OXYL-2,2,5,5-TETRAMETHYL-2,5-DIHYDRO-1H-PYRROL-3- HETNAM 2 MTN YL)METHYL] METHANESULFONOTHIOATE HETSYN MTN MTSL FORMUL 2 MTN 3(C10 H18 N O3 S2) HELIX 1 1 THR A 6 GLY A 19 1 14 HELIX 2 2 GLY A 19 GLY A 32 1 14 HELIX 3 3 TYR A 60 GLY A 66 1 7 HELIX 4 4 ARG A 67 LEU A 69 5 3 HELIX 5 5 ASN A 75 ASP A 82 1 8 HELIX 6 6 ASP A 82 GLU A 87 1 6 HELIX 7 7 PRO A 91 ALA A 96 1 6 HELIX 8 8 ALA A 96 GLY A 105 1 10 HELIX 9 9 ILE A 109 GLY A 120 1 12 LINK SG CYS A 30 S1 MTN A 128 1555 1555 2.03 LINK SG CYS A 48 S1 MTN A 129 1555 1555 2.02 LINK SG CYS A 102 S1 MTN A 130 1555 1555 2.02 SITE 1 AC1 2 CYS A 30 GLN A 54 SITE 1 AC2 6 PRO A 34 PHE A 45 PHE A 46 CYS A 48 SITE 2 AC2 6 ASN A 49 LEU A 68 SITE 1 AC3 5 PRO A 50 ALA A 96 GLN A 99 CYS A 102 SITE 2 AC3 5 PHE A 127 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1