HEADER PROTEIN BINDING 15-MAY-08 2K3S TITLE HADDOCK-DERIVED STRUCTURE OF THE CH-DOMAIN OF THE SMOOTHELIN-LIKE 1 TITLE 2 COMPLEXED WITH THE C-DOMAIN OF APOCALMODULIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMOOTHELIN-LIKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CALMODULIN; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: CAM; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 GENE: SMTNL1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 10 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 11 GENE: CALM1; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PTNCO12 KEYWDS APOCALMODULIN COMPLEX, CALPONIN HOMOLOGY DOMAIN, SMOOTHELIN-LIKE 1, KEYWDS 2 HADDOCK MODEL, CH-DOMAIN, COILED COIL, ACETYLATION, CALCIUM, KEYWDS 3 METHYLATION, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR H.ISHIDA,M.A.BORMAN,J.OSTRANDER,H.J.VOGEL,J.A.MACDONALD REVDAT 5 29-MAY-24 2K3S 1 REMARK REVDAT 4 16-MAR-22 2K3S 1 REMARK SEQADV REVDAT 3 24-FEB-09 2K3S 1 VERSN REVDAT 2 29-JUL-08 2K3S 1 JRNL REVDAT 1 27-MAY-08 2K3S 0 JRNL AUTH H.ISHIDA,M.A.BORMAN,J.OSTRANDER,H.J.VOGEL,J.A.MACDONALD JRNL TITL SOLUTION STRUCTURE OF THE CALPONIN HOMOLOGY (CH) DOMAIN FROM JRNL TITL 2 THE SMOOTHELIN-LIKE 1 PROTEIN: A UNIQUE JRNL TITL 3 APOCALMODULIN-BINDING MODE AND THE POSSIBLE ROLE OF THE JRNL TITL 4 C-TERMINAL TYPE-2 CH-DOMAIN IN SMOOTH MUSCLE RELAXATION. JRNL REF J.BIOL.CHEM. V. 283 20569 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18477568 JRNL DOI 10.1074/JBC.M800627200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : HADDOCK 2.0, HADDOCK 2.0 REMARK 3 AUTHORS : DOMINGUEZ, C. ET AL. (HADDOCK), DOMINGUEZ, C. ET REMARK 3 AL. (HADDOCK) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K3S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000100639. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 15N] ENTITY_1, REMARK 210 0.6 MM CALMODULIN (FULL LENGTH), REMARK 210 20 MM BIS-TRIS, 0.5 MM DSS, 10 REMARK 210 MM [U-2H] DTT, 0.03 % SODIUM REMARK 210 AZIDE, 1 MM EDTA, 90% H2O/10% REMARK 210 D2O; 0.6 MM ENTITY_1, 0.5 MM [U- REMARK 210 100% 15N] CALMODULIN (FULL REMARK 210 LENGTH), 20 MM BIS-TRIS, 0.5 MM REMARK 210 DSS, 10 MM [U-2H] DTT, 0.03 % REMARK 210 SODIUM AZIDE, 1 MM EDTA, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : HADDOCK DOCKING CALCULATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H2 GLU B 82 OE1 GLU B 84 1.59 REMARK 500 OD2 ASP A 56 HZ3 LYS A 59 1.60 REMARK 500 HZ3 LYS A 6 OD2 ASP B 95 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 29 -86.79 -163.58 REMARK 500 1 ALA A 90 -51.83 73.67 REMARK 500 1 LYS B 115 30.48 -94.08 REMARK 500 1 ILE B 130 -70.54 -125.70 REMARK 500 2 LEU A 3 58.22 -104.64 REMARK 500 2 HIS A 22 -6.23 76.82 REMARK 500 2 VAL A 23 78.73 -117.57 REMARK 500 2 SER A 29 -87.72 -161.95 REMARK 500 2 LYS A 59 46.23 -105.71 REMARK 500 2 ALA A 90 -64.70 72.07 REMARK 500 2 ASP B 95 -44.68 -148.32 REMARK 500 2 ILE B 130 -79.68 -105.83 REMARK 500 2 ASP B 133 -89.90 -113.60 REMARK 500 3 SER A 29 -80.20 -158.06 REMARK 500 3 LYS A 59 40.93 -109.95 REMARK 500 3 GLU A 72 25.76 -78.97 REMARK 500 3 LYS A 73 -53.28 -127.05 REMARK 500 3 ASP A 76 75.42 69.98 REMARK 500 3 ALA A 90 -54.63 73.06 REMARK 500 3 LYS A 115 50.92 -98.10 REMARK 500 3 ILE B 130 -62.84 -121.67 REMARK 500 3 ASP B 133 -79.65 -114.87 REMARK 500 4 PRO A 2 -74.60 -60.64 REMARK 500 4 HIS A 22 -15.62 79.45 REMARK 500 4 SER A 29 -76.42 -149.70 REMARK 500 4 ALA A 49 -72.49 -82.63 REMARK 500 4 ASP A 76 74.69 52.39 REMARK 500 4 ALA A 90 -41.08 74.53 REMARK 500 4 LYS B 115 48.16 -77.67 REMARK 500 4 ASP B 129 78.53 -104.72 REMARK 500 4 ILE B 130 -64.08 -105.96 REMARK 500 4 ASP B 133 -68.94 -135.31 REMARK 500 5 SER A 29 -70.77 -133.72 REMARK 500 5 ALA A 90 -58.74 72.38 REMARK 500 5 LYS A 115 54.38 -90.74 REMARK 500 5 ASP B 95 -51.59 -151.66 REMARK 500 5 ASP B 133 -73.25 -126.68 REMARK 500 6 PRO A 2 88.22 -68.13 REMARK 500 6 PHE A 28 34.00 -77.98 REMARK 500 6 SER A 29 -67.29 -153.38 REMARK 500 6 LYS A 59 32.99 -86.92 REMARK 500 6 ALA A 75 -30.21 -160.28 REMARK 500 6 ASP A 76 88.00 66.24 REMARK 500 6 CYS A 77 -159.42 -106.57 REMARK 500 6 ALA A 90 -53.17 73.59 REMARK 500 6 LYS A 115 45.07 -87.26 REMARK 500 6 ASP B 95 -17.22 -143.82 REMARK 500 6 ASP B 133 -65.23 -104.98 REMARK 500 7 PRO A 2 21.03 -79.67 REMARK 500 7 PHE A 28 57.10 -90.21 REMARK 500 REMARK 500 THIS ENTRY HAS 103 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JV9 RELATED DB: PDB REMARK 900 RELATED ID: 1F71 RELATED DB: PDB DBREF 2K3S A 6 119 UNP Q99LM3 SMTL1_MOUSE 346 459 DBREF 2K3S B 82 148 UNP P62155 CALM_XENLA 83 149 SEQADV 2K3S GLY A 1 UNP Q99LM3 EXPRESSION TAG SEQADV 2K3S PRO A 2 UNP Q99LM3 EXPRESSION TAG SEQADV 2K3S LEU A 3 UNP Q99LM3 EXPRESSION TAG SEQADV 2K3S GLY A 4 UNP Q99LM3 EXPRESSION TAG SEQADV 2K3S SER A 5 UNP Q99LM3 EXPRESSION TAG SEQRES 1 A 119 GLY PRO LEU GLY SER LYS ASN MET LEU LEU GLU TRP CYS SEQRES 2 A 119 ARG ALA MET THR ARG ASN TYR GLU HIS VAL ASP ILE GLN SEQRES 3 A 119 ASN PHE SER SER SER TRP SER SER GLY MET ALA PHE CYS SEQRES 4 A 119 ALA LEU ILE HIS LYS PHE PHE PRO GLU ALA PHE ASP TYR SEQRES 5 A 119 ALA GLU LEU ASP PRO ALA LYS ARG ARG HIS ASN PHE THR SEQRES 6 A 119 LEU ALA PHE SER THR ALA GLU LYS LEU ALA ASP CYS ALA SEQRES 7 A 119 GLN LEU LEU GLU VAL ASP ASP MET VAL ARG LEU ALA VAL SEQRES 8 A 119 PRO ASP SER LYS CYS VAL TYR THR TYR ILE GLN GLU LEU SEQRES 9 A 119 TYR ARG SER LEU VAL GLN LYS GLY LEU VAL LYS THR LYS SEQRES 10 A 119 LYS LYS SEQRES 1 B 67 GLU GLU GLU ILE ARG GLU ALA PHE ARG VAL PHE ASP LYS SEQRES 2 B 67 ASP GLY ASN GLY TYR ILE SER ALA ALA GLU LEU ARG HIS SEQRES 3 B 67 VAL MET THR ASN LEU GLY GLU LYS LEU THR ASP GLU GLU SEQRES 4 B 67 VAL ASP GLU MET ILE ARG GLU ALA ASP ILE ASP GLY ASP SEQRES 5 B 67 GLY GLN VAL ASN TYR GLU GLU PHE VAL GLN MET MET THR SEQRES 6 B 67 ALA LYS HELIX 1 1 GLY A 4 ARG A 18 1 15 HELIX 2 2 SER A 29 SER A 33 5 5 HELIX 3 3 GLY A 35 PHE A 46 1 12 HELIX 4 4 ASP A 51 LEU A 55 5 5 HELIX 5 5 ASP A 56 ALA A 58 5 3 HELIX 6 6 LYS A 59 ASP A 76 1 18 HELIX 7 7 GLU A 82 ALA A 90 1 9 HELIX 8 8 ASP A 93 LYS A 111 1 19 HELIX 9 9 GLU B 82 ASP B 93 1 12 HELIX 10 10 SER B 101 LEU B 112 1 12 HELIX 11 11 THR B 117 GLU B 127 1 11 HELIX 12 12 TYR B 138 LYS B 148 1 11 SHEET 1 A 2 TYR B 99 ILE B 100 0 SHEET 2 A 2 VAL B 136 ASN B 137 -1 O VAL B 136 N ILE B 100 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1