HEADER VIRAL PROTEIN 30-MAY-08 2K48 TITLE NMR STRUCTURE OF THE N-TERMINAL COILED COIL DOMAIN OF THE ANDES TITLE 2 HANTAVIRUS NUCLEOCAPSID PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN (RESIDUES 1-74); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANDES VIRUS; SOURCE 3 ORGANISM_TAXID: 46607; SOURCE 4 STRAIN: 23; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET151 KEYWDS VIRAL NUCLEOPROTEIN, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.WANG,D.M.BOUDREAUX,D.F.ESTRADA,C.W.EGAN,S.C.ST JEOR,R.N.DE GUZMAN REVDAT 4 16-MAR-22 2K48 1 REMARK SEQADV REVDAT 3 24-FEB-09 2K48 1 VERSN REVDAT 2 28-OCT-08 2K48 1 JRNL REVDAT 1 05-AUG-08 2K48 0 JRNL AUTH Y.WANG,D.M.BOUDREAUX,D.F.ESTRADA,C.W.EGAN,S.C.ST JEOR, JRNL AUTH 2 R.N.DE GUZMAN JRNL TITL NMR STRUCTURE OF THE N-TERMINAL COILED COIL DOMAIN OF THE JRNL TITL 2 ANDES HANTAVIRUS NUCLEOCAPSID PROTEIN. JRNL REF J.BIOL.CHEM. V. 283 28297 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18687679 JRNL DOI 10.1074/JBC.M804869200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CYANA 1.0, AMBER 7 REMARK 3 AUTHORS : DELAGLIO, F. ET AL. (NMRPIPE), GUNTERT, P. ET AL. REMARK 3 (CYANA), CASE, D. ET AL. (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K48 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000100655. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : 28 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 10 MM SODIUM PHOSPHATE, REMARK 210 10 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O; 1.0 MM [U-100% 13C; U- REMARK 210 100% 15N] PROTEIN, 10 MM SODIUM REMARK 210 PHOSPHATE, 10 MM SODIUM CHLORIDE, REMARK 210 100% D2O; 1.0 MM [U-100% 15N] REMARK 210 PROTEIN, 10 MM SODIUM PHOSPHATE, REMARK 210 10 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HNCACB; 3D HNCO; 3D CBCA(CO)NH; REMARK 210 3D 1H-15N NOESY; 3D HBHA(CO)NH; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.0.4, CYANA 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 LEU A 58 CB - CA - C ANGL. DEV. = 11.5 DEGREES REMARK 500 5 THR A 76 CA - CB - CG2 ANGL. DEV. = 8.5 DEGREES REMARK 500 13 ARG A 55 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 16 LEU A 58 CB - CA - C ANGL. DEV. = 11.9 DEGREES REMARK 500 16 THR A 76 CA - CB - CG2 ANGL. DEV. = 8.9 DEGREES REMARK 500 17 ARG A 55 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 19 ARG A 55 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 19 THR A 76 CA - CB - CG2 ANGL. DEV. = 8.4 DEGREES REMARK 500 20 LEU A 58 CB - CA - C ANGL. DEV. = 11.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 68 76.47 -151.78 REMARK 500 1 PRO A 69 54.66 -62.09 REMARK 500 1 ALA A 103 2.74 -65.97 REMARK 500 2 LEU A 24 46.32 -142.63 REMARK 500 2 PRO A 31 -130.10 -81.22 REMARK 500 2 ASP A 68 78.02 -152.22 REMARK 500 2 PRO A 69 53.84 -61.39 REMARK 500 2 ALA A 103 6.14 -65.66 REMARK 500 3 HIS A 2 -18.77 -142.92 REMARK 500 3 LEU A 15 -47.69 -142.99 REMARK 500 3 SER A 20 20.38 -140.82 REMARK 500 3 PHE A 32 6.69 -66.85 REMARK 500 3 ASP A 68 71.63 -150.75 REMARK 500 3 PRO A 69 53.09 -59.83 REMARK 500 3 ALA A 103 5.63 -65.44 REMARK 500 4 ASP A 19 15.25 -141.78 REMARK 500 4 ASP A 68 78.34 -152.34 REMARK 500 4 PRO A 69 55.17 -61.13 REMARK 500 4 ALA A 103 8.31 -69.15 REMARK 500 5 HIS A 7 -154.47 49.20 REMARK 500 5 SER A 20 -14.78 -151.15 REMARK 500 5 ASP A 68 78.51 -152.19 REMARK 500 5 PRO A 69 54.75 -60.58 REMARK 500 5 ALA A 103 6.31 -65.63 REMARK 500 6 ASP A 19 22.86 -142.16 REMARK 500 6 ILE A 29 -40.80 -142.53 REMARK 500 6 ASP A 68 72.56 -151.29 REMARK 500 6 PRO A 69 49.85 -58.72 REMARK 500 6 ALA A 103 3.07 -64.38 REMARK 500 7 HIS A 3 -166.37 54.73 REMARK 500 7 ASP A 68 72.96 -151.29 REMARK 500 7 PRO A 69 50.03 -59.64 REMARK 500 7 ALA A 103 8.02 -66.68 REMARK 500 8 HIS A 7 -169.55 51.88 REMARK 500 8 PHE A 32 -7.35 61.81 REMARK 500 8 ASP A 68 76.51 -152.01 REMARK 500 8 PRO A 69 54.78 -61.66 REMARK 500 8 ALA A 103 5.43 -65.89 REMARK 500 9 HIS A 7 -35.22 -145.46 REMARK 500 9 LEU A 15 -168.30 53.98 REMARK 500 9 LEU A 16 -53.56 -144.51 REMARK 500 9 ASN A 23 -39.88 -158.47 REMARK 500 9 PHE A 32 18.73 57.19 REMARK 500 9 ASP A 68 71.71 -150.87 REMARK 500 9 PRO A 69 51.47 -59.37 REMARK 500 9 ALA A 103 7.95 -66.25 REMARK 500 10 TYR A 25 17.14 -147.97 REMARK 500 10 ASP A 68 76.54 -151.93 REMARK 500 10 PRO A 69 51.71 -61.57 REMARK 500 10 ALA A 103 0.47 -64.02 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2K48 A 34 107 UNP Q80DP9 Q80DP9_9VIRU 1 74 SEQADV 2K48 MET A 1 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 2 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 3 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 4 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 5 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 6 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 HIS A 7 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 GLY A 8 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 LYS A 9 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PRO A 10 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ILE A 11 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PRO A 12 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ASN A 13 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PRO A 14 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 LEU A 15 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 LEU A 16 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 GLY A 17 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 LEU A 18 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ASP A 19 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 SER A 20 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 THR A 21 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 GLU A 22 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ASN A 23 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 LEU A 24 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 TYR A 25 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PHE A 26 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 GLN A 27 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 GLY A 28 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ILE A 29 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 ASP A 30 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PRO A 31 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 PHE A 32 UNP Q80DP9 EXPRESSION TAG SEQADV 2K48 THR A 33 UNP Q80DP9 EXPRESSION TAG SEQRES 1 A 107 MET HIS HIS HIS HIS HIS HIS GLY LYS PRO ILE PRO ASN SEQRES 2 A 107 PRO LEU LEU GLY LEU ASP SER THR GLU ASN LEU TYR PHE SEQRES 3 A 107 GLN GLY ILE ASP PRO PHE THR MET SER THR LEU GLN GLU SEQRES 4 A 107 LEU GLN GLU ASN ILE THR ALA HIS GLU GLN GLN LEU VAL SEQRES 5 A 107 THR ALA ARG GLN LYS LEU LYS ASP ALA GLU LYS ALA VAL SEQRES 6 A 107 GLU VAL ASP PRO ASP ASP VAL ASN LYS SER THR LEU GLN SEQRES 7 A 107 ASN ARG ARG ALA ALA VAL SER THR LEU GLU THR LYS LEU SEQRES 8 A 107 GLY GLU LEU LYS ARG GLN LEU ALA ASP LEU VAL ALA ALA SEQRES 9 A 107 GLN LYS LEU HELIX 1 1 PRO A 31 ASP A 68 1 38 HELIX 2 2 ASP A 70 LYS A 106 1 37 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1