HEADER METAL TRANSPORT 27-JUN-08 2K5I TITLE SOLUTION STRUCTURE OF IRON(II) TRANSPORT PROTEIN A FROM CLOSTRIDIUM TITLE 2 THERMOCELLUM , NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET TITLE 3 VR131 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON TRANSPORT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1515; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET 21-23C KEYWDS IRON(II) TRANSPORT PROTEIN A, FEOA, STRUCTURAL GENOMIC, STRUCTURAL KEYWDS 2 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM, NESG, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,H.WANG,E.L.FOOTE,M.JIANG,R.XIAO,G.SWAPNA,R.NAIR,J.K.EVERETT, AUTHOR 2 T.B.ACTON,B.ROST,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 4 01-MAY-24 2K5I 1 REMARK REVDAT 3 13-NOV-19 2K5I 1 KEYWDS REMARK REVDAT 2 24-FEB-09 2K5I 1 VERSN REVDAT 1 26-AUG-08 2K5I 0 JRNL AUTH G.LIU,R.XIAO,G.T.MONTELIONE JRNL TITL NMR CHEMICAL SHIFT ASSIGNMENTS OF IRON(II) TRANSPORT PROTEIN JRNL TITL 2 A FROM CLOSTRIDIUM THERMOCELLUM , NORTHEAST STRUCTURAL JRNL TITL 3 GENOMICS CONSORTIUM (NESG) TARGET VR131 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K5I COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000100701. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NA REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.92 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O; 0.65 REMARK 210 MM [U-10% 13C; U-100% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY; REMARK 210 3D SIMULTANEOUS CN-NOESY; 4,3D REMARK 210 GFT CABCACONHN; 4,3D GFT REMARK 210 HNNCABCA; 4,3D GFT HABCABCONHN; REMARK 210 3D CCH-COSY; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, AUTOSTRUCTURE 2.2.1, REMARK 210 AUTOASSIGN 2.3.0, XEASY 1.3.1, REMARK 210 NMRPIPE 2.3, TOPSPIN, VNMRJ REMARK 210 METHOD USED : SIMULATED ANNEALING, DISTANCE REMARK 210 GEOMETRY, TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 18 46.47 -80.89 REMARK 500 1 GLU A 22 -71.35 65.09 REMARK 500 1 PHE A 32 94.01 -64.78 REMARK 500 1 ASN A 56 -28.84 76.21 REMARK 500 1 ASP A 84 -83.88 -72.68 REMARK 500 1 GLU A 109 -74.08 -88.52 REMARK 500 1 TYR A 132 -73.05 -159.26 REMARK 500 1 SER A 144 79.86 62.72 REMARK 500 1 HIS A 160 -42.12 73.79 REMARK 500 2 PRO A 34 102.27 -53.84 REMARK 500 2 ASP A 84 -76.14 -88.37 REMARK 500 2 GLU A 109 -53.56 -154.76 REMARK 500 2 SER A 110 137.72 -176.46 REMARK 500 2 ARG A 119 16.55 56.98 REMARK 500 2 SER A 144 -61.26 71.59 REMARK 500 2 ASP A 145 -68.58 69.68 REMARK 500 3 LYS A 15 -62.00 -101.62 REMARK 500 3 PRO A 34 108.24 -50.98 REMARK 500 3 ALA A 83 94.17 -60.19 REMARK 500 3 ASP A 85 115.81 -36.51 REMARK 500 3 GLU A 109 -45.27 -174.35 REMARK 500 3 SER A 110 140.37 176.31 REMARK 500 3 ARG A 119 17.18 -145.87 REMARK 500 3 TYR A 132 -67.04 -162.74 REMARK 500 3 GLU A 149 -169.57 -77.69 REMARK 500 3 PRO A 152 95.63 -43.63 REMARK 500 4 GLU A 22 -65.98 66.63 REMARK 500 4 ASN A 56 -37.33 77.73 REMARK 500 4 ILE A 108 75.15 -69.48 REMARK 500 4 SER A 110 140.91 -179.78 REMARK 500 4 GLU A 124 40.43 38.69 REMARK 500 4 TYR A 132 -65.07 -127.28 REMARK 500 4 SER A 144 -71.09 66.30 REMARK 500 4 ASP A 145 -77.57 50.79 REMARK 500 4 SER A 150 -161.83 -113.47 REMARK 500 4 PRO A 152 -149.51 -64.02 REMARK 500 4 GLN A 153 -93.11 66.76 REMARK 500 4 LYS A 154 149.92 57.11 REMARK 500 4 HIS A 160 -143.29 -92.07 REMARK 500 4 HIS A 161 -173.69 -67.39 REMARK 500 5 PRO A 34 108.21 -50.18 REMARK 500 5 GLU A 109 -76.63 -94.82 REMARK 500 5 ARG A 119 -36.00 73.16 REMARK 500 5 GLU A 124 22.03 46.03 REMARK 500 5 TYR A 132 -65.03 -141.43 REMARK 500 5 ALA A 146 25.13 -73.36 REMARK 500 5 PRO A 152 87.79 -55.01 REMARK 500 5 GLU A 156 -42.82 71.76 REMARK 500 5 HIS A 157 -73.64 68.28 REMARK 500 5 HIS A 158 117.65 -166.77 REMARK 500 REMARK 500 THIS ENTRY HAS 190 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: VR131 RELATED DB: TARGETDB REMARK 900 RELATED ID: 15837 RELATED DB: BMRB DBREF 2K5I A 1 162 PDB 2K5I 2K5I 1 162 SEQRES 1 A 162 MET LYS LEU SER ARG LEU VAL PRO GLY VAL PRO ALA ARG SEQRES 2 A 162 ILE LYS ARG LEU GLU VAL SER GLY GLU LEU HIS GLU LYS SEQRES 3 A 162 LEU VAL GLY MET GLY PHE VAL PRO GLY GLU GLU ILE GLU SEQRES 4 A 162 ILE VAL GLN VAL ALA PRO LEU GLY ASP PRO ILE VAL CYS SEQRES 5 A 162 LYS ILE GLY ASN ARG ASN ILE THR LEU ARG LYS ARG GLU SEQRES 6 A 162 ALA ASP LEU ILE GLU VAL GLU VAL VAL GLY GLY GLU LEU SEQRES 7 A 162 PRO LEU ILE LEU ALA ASP ASP GLY THR TYR GLU ILE THR SEQRES 8 A 162 LYS LEU ASN GLY GLY ARG ARG PHE LEU PHE ARG MET LYS SEQRES 9 A 162 ASN LEU GLY ILE GLU SER GLY LYS LYS ILE GLN VAL SER SEQRES 10 A 162 GLY ARG ARG TYR TYR ILE GLU GLY ARG GLU ILE ASP LEU SEQRES 11 A 162 GLY TYR GLY GLU ALA THR LYS ILE TRP VAL ARG ARG VAL SEQRES 12 A 162 SER ASP ALA GLY GLU GLU SER HIS PRO GLN LYS LEU GLU SEQRES 13 A 162 HIS HIS HIS HIS HIS HIS HELIX 1 1 LYS A 2 LEU A 6 5 5 HELIX 2 2 GLU A 22 GLY A 31 1 10 HELIX 3 3 ARG A 62 ASP A 67 1 6 HELIX 4 4 ILE A 81 ALA A 83 5 3 HELIX 5 5 GLY A 96 GLY A 107 1 12 HELIX 6 6 GLU A 134 THR A 136 5 3 SHEET 1 A 5 ARG A 57 LEU A 61 0 SHEET 2 A 5 ILE A 50 ILE A 54 -1 N ILE A 54 O ARG A 57 SHEET 3 A 5 GLU A 37 VAL A 43 -1 N VAL A 41 O VAL A 51 SHEET 4 A 5 PRO A 11 LEU A 17 -1 N ALA A 12 O ILE A 38 SHEET 5 A 5 ILE A 69 VAL A 73 -1 O GLU A 72 N ARG A 13 SHEET 1 B 6 LEU A 78 PRO A 79 0 SHEET 2 B 6 ILE A 138 ARG A 142 -1 O VAL A 140 N LEU A 78 SHEET 3 B 6 THR A 87 LEU A 93 -1 N LYS A 92 O TRP A 139 SHEET 4 B 6 LYS A 113 SER A 117 -1 O ILE A 114 N TYR A 88 SHEET 5 B 6 ARG A 120 ILE A 123 -1 O TYR A 122 N GLN A 115 SHEET 6 B 6 ARG A 126 ILE A 128 -1 O ARG A 126 N ILE A 123 CISPEP 1 ASP A 48 PRO A 49 1 5.55 CISPEP 2 ASP A 48 PRO A 49 2 4.77 CISPEP 3 ASP A 48 PRO A 49 3 3.83 CISPEP 4 ASP A 48 PRO A 49 4 2.71 CISPEP 5 ASP A 48 PRO A 49 5 -1.67 CISPEP 6 ASP A 48 PRO A 49 6 4.21 CISPEP 7 ASP A 48 PRO A 49 7 3.99 CISPEP 8 ASP A 48 PRO A 49 8 3.24 CISPEP 9 ASP A 48 PRO A 49 9 1.25 CISPEP 10 ASP A 48 PRO A 49 10 -4.63 CISPEP 11 ASP A 48 PRO A 49 11 3.00 CISPEP 12 ASP A 48 PRO A 49 12 -1.85 CISPEP 13 ASP A 48 PRO A 49 13 -3.00 CISPEP 14 ASP A 48 PRO A 49 14 1.42 CISPEP 15 ASP A 48 PRO A 49 15 -0.57 CISPEP 16 ASP A 48 PRO A 49 16 4.94 CISPEP 17 ASP A 48 PRO A 49 17 5.56 CISPEP 18 ASP A 48 PRO A 49 18 3.26 CISPEP 19 ASP A 48 PRO A 49 19 -2.82 CISPEP 20 ASP A 48 PRO A 49 20 -1.36 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1