HEADER DNA BINDING PROTEIN 02-SEP-08 2K86 TITLE SOLUTION STRUCTURE OF FOXO3A FORKHEAD DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORKHEAD BOX PROTEIN O3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FORKHEEAD (FH) DOMAIN; COMPND 5 SYNONYM: FORKHEAD IN RHABDOMYOSARCOMA-LIKE 1, AF6Q21 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FOXO3, FKHRL1, FOXO3A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1 KEYWDS FORKHEAD, WINGED-HELIX, DNA BINDING DOMAIN, ACTIVATOR, APOPTOSIS, KEYWDS 2 CHROMOSOMAL REARRANGEMENT, CYTOPLASM, DNA-BINDING, NUCLEUS, KEYWDS 3 PHOSPHOPROTEIN, PROTO-ONCOGENE, TRANSCRIPTION, TRANSCRIPTION KEYWDS 4 REGULATION, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.WANG,C.B.MARSHALL,G.LI,M.J.PLEVIN,M.IKURA REVDAT 5 01-MAY-24 2K86 1 REMARK REVDAT 4 19-FEB-20 2K86 1 REMARK SEQADV REVDAT 3 24-FEB-09 2K86 1 VERSN REVDAT 2 25-NOV-08 2K86 1 JRNL REVDAT 1 14-OCT-08 2K86 0 JRNL AUTH F.WANG,C.B.MARSHALL,K.YAMAMOTO,G.Y.LI,M.J.PLEVIN,H.YOU, JRNL AUTH 2 T.W.MAK,M.IKURA JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF AN JRNL TITL 2 INTRAMOLECULAR INTERACTION IN FOXO3A AND ITS BINDING WITH JRNL TITL 3 P53. JRNL REF J.MOL.BIOL. V. 384 590 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18824006 JRNL DOI 10.1016/J.JMB.2008.09.025 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, A.T. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATER REFINEMENT 'AART J. NEDERVEEN, REMARK 3 JURGEN F. DORELEIJERS, WIM VRANKEN, ZACHARY MILLER, CHRIS A.E.M. REMARK 3 SPRONK, SANDER B. NABUURS, PETER GUENTERT, MIRON LIVNY, JOHN L. REMARK 3 MARKLEY, MICHAEL NILGES, ELDON L. ULRICH, ROBERT KAPTEIN AND REMARK 3 ALEXANDRE M.J.J. BONVIN (2005). RECOORD: A RECALCULATED REMARK 3 COORDINATES DATABASE OF 500+ PROTEINS FROM THE PDB USING REMARK 3 RESTRAINTS FROM THE BIOMAGRESBANK. PROTEINS 59, 662-672.' REMARK 4 REMARK 4 2K86 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100797. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.08 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 50 MM REMARK 210 POTASSIUM CHLORIDE, 2 MM DTT, REMARK 210 0.5 MM SODIUM AZIDE, 90% H2O/10% REMARK 210 D2O; 20 MM SODIUM PHOSPHATE, 50 REMARK 210 MM POTASSIUM CHLORIDE, 2 MM DTT, REMARK 210 0.5 MM SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D C(CO)NH; REMARK 210 3D H(CCO)NH; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 2D 1H-13C HSQC; 3D REMARK 210 HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRPIPE, XEASY, TALOS, REMARK 210 PROCHECKNMR, NMRVIEW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 205 HD21 ASN A 208 1.56 REMARK 500 O ILE A 170 HG SER A 173 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 156 27.06 -78.16 REMARK 500 1 TRP A 157 -50.51 -127.90 REMARK 500 1 HIS A 217 -107.18 55.63 REMARK 500 1 SER A 218 35.67 -155.11 REMARK 500 1 ASP A 239 -35.97 176.95 REMARK 500 2 SER A 151 -65.46 69.82 REMARK 500 2 SER A 152 -74.08 -176.97 REMARK 500 2 ALA A 156 27.73 -76.78 REMARK 500 2 SER A 200 -166.60 66.92 REMARK 500 2 SER A 203 -71.51 -57.31 REMARK 500 2 ALA A 204 35.77 -82.93 REMARK 500 2 HIS A 217 -0.18 68.51 REMARK 500 2 ASP A 239 -47.62 175.17 REMARK 500 2 SER A 243 36.02 -75.24 REMARK 500 2 ALA A 246 87.28 53.16 REMARK 500 3 SER A 151 -170.65 59.26 REMARK 500 3 ASN A 159 32.98 -80.56 REMARK 500 3 PRO A 174 -75.96 -80.04 REMARK 500 3 SER A 200 -159.32 -110.91 REMARK 500 3 LEU A 214 0.81 -68.73 REMARK 500 3 ASP A 239 -40.99 -178.85 REMARK 500 3 ARG A 249 66.56 64.78 REMARK 500 4 SER A 0 79.69 57.82 REMARK 500 4 SER A 151 -71.48 71.10 REMARK 500 4 SER A 152 -79.77 62.09 REMARK 500 4 ARG A 154 164.00 61.29 REMARK 500 4 ALA A 156 37.19 -80.06 REMARK 500 4 TRP A 157 -55.27 -150.19 REMARK 500 4 ALA A 204 48.03 -82.20 REMARK 500 4 HIS A 217 -158.48 64.60 REMARK 500 4 ASP A 239 -56.04 170.29 REMARK 500 5 SER A 151 109.22 -55.07 REMARK 500 5 ARG A 153 100.68 72.02 REMARK 500 5 TRP A 157 -44.16 -134.03 REMARK 500 5 ALA A 204 36.42 -83.44 REMARK 500 5 SER A 218 38.53 -76.18 REMARK 500 5 ASP A 239 -45.41 78.69 REMARK 500 5 LYS A 242 -73.90 -162.42 REMARK 500 5 SER A 243 35.13 -153.85 REMARK 500 5 ALA A 246 96.72 68.17 REMARK 500 5 ARG A 249 101.54 67.20 REMARK 500 6 ASN A 159 35.45 -83.88 REMARK 500 6 SER A 200 -172.93 72.78 REMARK 500 6 ALA A 204 43.37 -78.26 REMARK 500 6 SER A 218 23.39 -74.51 REMARK 500 6 ASP A 239 -35.77 160.01 REMARK 500 7 SER A 0 96.95 -69.22 REMARK 500 7 SER A 152 -71.74 -86.40 REMARK 500 7 ALA A 156 20.58 -76.56 REMARK 500 7 ALA A 204 41.83 -80.06 REMARK 500 REMARK 500 THIS ENTRY HAS 156 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 5 ARG A 219 0.09 SIDE CHAIN REMARK 500 6 ARG A 219 0.08 SIDE CHAIN REMARK 500 8 ARG A 168 0.07 SIDE CHAIN REMARK 500 9 ARG A 154 0.08 SIDE CHAIN REMARK 500 10 ARG A 154 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15939 RELATED DB: BMRB DBREF 2K86 A 151 251 UNP O43524 FOXO3_HUMAN 151 251 SEQADV 2K86 GLY A -1 UNP O43524 EXPRESSION TAG SEQADV 2K86 SER A 0 UNP O43524 EXPRESSION TAG SEQRES 1 A 103 GLY SER SER SER ARG ARG ASN ALA TRP GLY ASN LEU SER SEQRES 2 A 103 TYR ALA ASP LEU ILE THR ARG ALA ILE GLU SER SER PRO SEQRES 3 A 103 ASP LYS ARG LEU THR LEU SER GLN ILE TYR GLU TRP MET SEQRES 4 A 103 VAL ARG CYS VAL PRO TYR PHE LYS ASP LYS GLY ASP SER SEQRES 5 A 103 ASN SER SER ALA GLY TRP LYS ASN SER ILE ARG HIS ASN SEQRES 6 A 103 LEU SER LEU HIS SER ARG PHE MET ARG VAL GLN ASN GLU SEQRES 7 A 103 GLY THR GLY LYS SER SER TRP TRP ILE ILE ASN PRO ASP SEQRES 8 A 103 GLY GLY LYS SER GLY LYS ALA PRO ARG ARG ARG ALA HELIX 1 1 SER A 161 SER A 172 1 12 HELIX 2 2 THR A 179 VAL A 191 1 13 HELIX 3 3 PRO A 192 SER A 200 1 9 HELIX 4 4 SER A 202 LEU A 214 1 13 SHEET 1 A 2 PHE A 220 GLN A 224 0 SHEET 2 A 2 SER A 232 ILE A 236 -1 O TRP A 233 N VAL A 223 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1