HEADER MEMBRANE PROTEIN 15-OCT-08 2K9J TITLE INTEGRIN ALPHAIIB-BETA3 TRANSMEMBRANE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN ALPHA-IIB LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TRANSMEMBRANE DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTEGRIN BETA-3; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: TRANSMEMBRANE DOMAIN; COMPND 10 SYNONYM: PLATELET MEMBRANE GLYCOPROTEIN IIIA, GPIIIA, CD61 ANTIGEN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITGA2B, GP2B, ITGAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET44-GB3-AIIB,TM; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ITGB3, GP3A; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PET44-KSI-B3TM KEYWDS INTEGRIN, TRANSMEMBRANE COMPLEX, CELL ADHESION, CLEAVAGE ON PAIR OF KEYWDS 2 BASIC RESIDUES, DISEASE MUTATION, GLYCOPROTEIN, PYRROLIDONE KEYWDS 3 CARBOXYLIC ACID, RECEPTOR, HOST-VIRUS INTERACTION, PHOSPHOPROTEIN, KEYWDS 4 MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 21 MDLTYP MINIMIZED AVERAGE AUTHOR T.LAU,C.KIM,M.H.GINSBERG,T.S.ULMER REVDAT 5 22-MAY-24 2K9J 1 REMARK REVDAT 4 20-OCT-21 2K9J 1 REMARK SEQADV REVDAT 3 06-APR-11 2K9J 1 REMARK REVDAT 2 26-MAY-09 2K9J 1 JRNL REVDAT 1 24-MAR-09 2K9J 0 JRNL AUTH T.L.LAU,C.KIM,M.H.GINSBERG,T.S.ULMER JRNL TITL THE STRUCTURE OF THE INTEGRIN ALPHAIIBBETA3 TRANSMEMBRANE JRNL TITL 2 COMPLEX EXPLAINS INTEGRIN TRANSMEMBRANE SIGNALLING JRNL REF EMBO J. V. 28 1351 2009 JRNL REFN ISSN 0261-4189 JRNL PMID 19279667 JRNL DOI 10.1038/EMBOJ.2009.63 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000100846. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 301.2 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0.025 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-100% 13C; U-100% 15N; REMARK 210 80% 2H] INTEGRIN ALPHA-IIB LIGHT REMARK 210 CHAIN, 1.2 MM [U-100% 13C; U-100% REMARK 210 15N; 80% 2H] INTEGRIN BETA-3, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TRIPLE RESONANCE; NOESY, 13C/15N REMARK 210 -EDITED REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 21 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 692 H VAL B 696 1.35 REMARK 500 O VAL B 696 H VAL B 700 1.54 REMARK 500 O GLY B 690 H ASP B 692 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 959 -113.57 36.50 REMARK 500 1 GLU A 960 91.32 -33.35 REMARK 500 1 GLU A 961 174.85 177.48 REMARK 500 1 ARG A 962 -175.46 38.30 REMARK 500 1 PRO A 965 -0.40 -51.45 REMARK 500 1 GLU B 686 82.91 -50.66 REMARK 500 1 SER B 687 57.94 126.68 REMARK 500 1 PRO B 691 64.44 -56.35 REMARK 500 1 LYS B 725 9.32 -63.35 REMARK 500 2 ILE A 964 72.05 48.53 REMARK 500 2 SER B 687 72.50 51.87 REMARK 500 3 ILE A 964 68.40 31.36 REMARK 500 4 GLU A 961 -77.39 -90.59 REMARK 500 4 ILE A 964 64.46 -170.16 REMARK 500 4 SER B 687 51.91 -170.40 REMARK 500 5 SER B 687 74.05 54.60 REMARK 500 6 ILE A 964 75.14 -117.41 REMARK 500 7 SER B 687 -46.94 176.96 REMARK 500 8 ILE A 964 39.91 -145.29 REMARK 500 9 GLU A 960 109.76 56.50 REMARK 500 9 ALA A 963 155.53 57.95 REMARK 500 9 ILE A 964 68.53 60.57 REMARK 500 9 SER B 687 73.79 50.99 REMARK 500 10 ALA A 958 95.82 37.91 REMARK 500 10 SER B 687 70.56 54.49 REMARK 500 11 GLU A 960 123.16 57.06 REMARK 500 11 SER B 687 73.79 50.08 REMARK 500 12 SER B 687 73.43 -176.16 REMARK 500 13 ALA A 958 124.42 58.47 REMARK 500 13 GLU A 960 70.20 35.94 REMARK 500 13 ILE A 964 77.65 63.29 REMARK 500 14 SER B 687 73.23 47.31 REMARK 500 15 GLU B 726 -88.13 49.12 REMARK 500 16 ARG A 962 81.00 38.49 REMARK 500 16 ILE A 964 59.59 35.14 REMARK 500 16 SER B 687 70.63 53.11 REMARK 500 17 SER B 687 72.50 49.52 REMARK 500 17 LYS B 725 81.68 79.20 REMARK 500 19 SER B 687 73.20 40.82 REMARK 500 21 SER B 687 72.65 -177.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2K1A RELATED DB: PDB REMARK 900 RELATED ID: 2RMZ RELATED DB: PDB DBREF 2K9J A 958 998 UNP P08514 ITA2B_HUMAN 989 1029 DBREF 2K9J B 685 727 UNP P05106 ITB3_HUMAN 711 753 SEQADV 2K9J GLY A 957 UNP P08514 INSERTION SEQADV 2K9J SER B 687 UNP P05106 CYS 713 ENGINEERED MUTATION SEQRES 1 A 42 GLY ALA LEU GLU GLU ARG ALA ILE PRO ILE TRP TRP VAL SEQRES 2 A 42 LEU VAL GLY VAL LEU GLY GLY LEU LEU LEU LEU THR ILE SEQRES 3 A 42 LEU VAL LEU ALA MET TRP LYS VAL GLY PHE PHE LYS ARG SEQRES 4 A 42 ASN ARG PRO SEQRES 1 B 43 PRO GLU SER PRO LYS GLY PRO ASP ILE LEU VAL VAL LEU SEQRES 2 B 43 LEU SER VAL MET GLY ALA ILE LEU LEU ILE GLY LEU ALA SEQRES 3 B 43 ALA LEU LEU ILE TRP LYS LEU LEU ILE THR ILE HIS ASP SEQRES 4 B 43 ARG LYS GLU PHE HELIX 1 A1 ILE A 966 LYS A 989 1 24 HELIX 2 A2 ILE B 693 ASP B 723 1 31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1