data_2K9L # _entry.id 2K9L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2K9L pdb_00002k9l 10.2210/pdb2k9l/pdb RCSB RCSB100848 ? ? WWPDB D_1000100848 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2K9M _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2K9L _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-10-19 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hong, E.' 1 'Wemmer, D.' 2 # _citation.id primary _citation.title 'Structure of the RNA polymerase core-binding domain of sigma(54) reveals a likely conformational fracture point' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 390 _citation.page_first 70 _citation.page_last 82 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19426742 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.04.070 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hong, E.' 1 ? primary 'Doucleff, M.' 2 ? primary 'Wemmer, D.E.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA polymerase sigma factor RpoN' _entity.formula_weight 8930.142 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 60-135' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code KETVPYQIPYTPSELEELQQNIKLELEGKEQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLRLE _entity_poly.pdbx_seq_one_letter_code_can KETVPYQIPYTPSELEELQQNIKLELEGKEQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLRLE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLU n 1 3 THR n 1 4 VAL n 1 5 PRO n 1 6 TYR n 1 7 GLN n 1 8 ILE n 1 9 PRO n 1 10 TYR n 1 11 THR n 1 12 PRO n 1 13 SER n 1 14 GLU n 1 15 LEU n 1 16 GLU n 1 17 GLU n 1 18 LEU n 1 19 GLN n 1 20 GLN n 1 21 ASN n 1 22 ILE n 1 23 LYS n 1 24 LEU n 1 25 GLU n 1 26 LEU n 1 27 GLU n 1 28 GLY n 1 29 LYS n 1 30 GLU n 1 31 GLN n 1 32 GLU n 1 33 LEU n 1 34 ALA n 1 35 LEU n 1 36 GLU n 1 37 LEU n 1 38 LEU n 1 39 ASN n 1 40 TYR n 1 41 LEU n 1 42 ASN n 1 43 GLU n 1 44 LYS n 1 45 GLY n 1 46 PHE n 1 47 LEU n 1 48 SER n 1 49 LYS n 1 50 SER n 1 51 VAL n 1 52 GLU n 1 53 GLU n 1 54 ILE n 1 55 SER n 1 56 ASP n 1 57 VAL n 1 58 LEU n 1 59 ARG n 1 60 CYS n 1 61 SER n 1 62 VAL n 1 63 GLU n 1 64 GLU n 1 65 LEU n 1 66 GLU n 1 67 LYS n 1 68 VAL n 1 69 ARG n 1 70 GLN n 1 71 LYS n 1 72 VAL n 1 73 LEU n 1 74 ARG n 1 75 LEU n 1 76 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene rpoN _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 63363 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET21b3-2 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O66858_AQUAE _struct_ref.pdbx_db_accession O66858 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KETVPYQIPYTPSELEELQQNIKLELEGKEQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLRLE _struct_ref.pdbx_align_begin 60 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2K9L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O66858 _struct_ref_seq.db_align_beg 60 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 135 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 60 _struct_ref_seq.pdbx_auth_seq_align_end 135 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D HNCACB' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HNCA' 1 6 1 '3D H(CCO)NH' 1 7 1 '3D C(CO)NH' 1 8 1 '3D HBHA(CO)NH' 1 9 1 '3D 1H-15N NOESY' 1 10 1 '3D HCCH-TOCSY' 1 11 1 '3D 1H-13C NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 13C; U-100% 15N] RNAP, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 15N] RNAP, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker DRX 1 'Bruker DRX' 900 Bruker DRX 2 'Bruker DRX' 600 Bruker DRX 3 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2K9L _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2K9L _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2K9L _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 1 'Guntert, Mumenthaler and Wuthrich' refinement CYANA ? 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.4 3 Goddard 'chemical shift assignment' Sparky 3.114 4 Goddard 'data analysis' Sparky 3.114 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2K9L _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2K9L _struct.title 'Structure of the Core Binding Domain of sigma54' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2K9L _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'protein, TRANSCRIPTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? LEU A 26 ? THR A 70 LEU A 85 1 ? 16 HELX_P HELX_P2 2 GLU A 30 ? LEU A 41 ? GLU A 89 LEU A 100 1 ? 12 HELX_P HELX_P3 3 SER A 50 ? ARG A 59 ? SER A 109 ARG A 118 1 ? 10 HELX_P HELX_P4 4 SER A 61 ? ARG A 74 ? SER A 120 ARG A 133 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 1 -0.17 2 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 2 -0.19 3 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 3 -0.14 4 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 4 -0.15 5 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 5 -0.10 6 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 6 -0.13 7 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 7 -0.10 8 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 8 -0.08 9 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 9 -0.14 10 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 10 -0.10 11 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 11 -0.17 12 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 12 -0.14 13 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 13 -0.12 14 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 14 -0.19 15 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 15 -0.11 16 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 16 -0.05 17 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 17 -0.06 18 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 18 -0.09 19 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 19 -0.08 20 ILE 8 A . ? ILE 67 A PRO 9 A ? PRO 68 A 20 -0.10 # _atom_sites.entry_id 2K9L _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 60 60 LYS LYS A . n A 1 2 GLU 2 61 61 GLU GLU A . n A 1 3 THR 3 62 62 THR THR A . n A 1 4 VAL 4 63 63 VAL VAL A . n A 1 5 PRO 5 64 64 PRO PRO A . n A 1 6 TYR 6 65 65 TYR TYR A . n A 1 7 GLN 7 66 66 GLN GLN A . n A 1 8 ILE 8 67 67 ILE ILE A . n A 1 9 PRO 9 68 68 PRO PRO A . n A 1 10 TYR 10 69 69 TYR TYR A . n A 1 11 THR 11 70 70 THR THR A . n A 1 12 PRO 12 71 71 PRO PRO A . n A 1 13 SER 13 72 72 SER SER A . n A 1 14 GLU 14 73 73 GLU GLU A . n A 1 15 LEU 15 74 74 LEU LEU A . n A 1 16 GLU 16 75 75 GLU GLU A . n A 1 17 GLU 17 76 76 GLU GLU A . n A 1 18 LEU 18 77 77 LEU LEU A . n A 1 19 GLN 19 78 78 GLN GLN A . n A 1 20 GLN 20 79 79 GLN GLN A . n A 1 21 ASN 21 80 80 ASN ASN A . n A 1 22 ILE 22 81 81 ILE ILE A . n A 1 23 LYS 23 82 82 LYS LYS A . n A 1 24 LEU 24 83 83 LEU LEU A . n A 1 25 GLU 25 84 84 GLU GLU A . n A 1 26 LEU 26 85 85 LEU LEU A . n A 1 27 GLU 27 86 86 GLU GLU A . n A 1 28 GLY 28 87 87 GLY GLY A . n A 1 29 LYS 29 88 88 LYS LYS A . n A 1 30 GLU 30 89 89 GLU GLU A . n A 1 31 GLN 31 90 90 GLN GLN A . n A 1 32 GLU 32 91 91 GLU GLU A . n A 1 33 LEU 33 92 92 LEU LEU A . n A 1 34 ALA 34 93 93 ALA ALA A . n A 1 35 LEU 35 94 94 LEU LEU A . n A 1 36 GLU 36 95 95 GLU GLU A . n A 1 37 LEU 37 96 96 LEU LEU A . n A 1 38 LEU 38 97 97 LEU LEU A . n A 1 39 ASN 39 98 98 ASN ASN A . n A 1 40 TYR 40 99 99 TYR TYR A . n A 1 41 LEU 41 100 100 LEU LEU A . n A 1 42 ASN 42 101 101 ASN ASN A . n A 1 43 GLU 43 102 102 GLU GLU A . n A 1 44 LYS 44 103 103 LYS LYS A . n A 1 45 GLY 45 104 104 GLY GLY A . n A 1 46 PHE 46 105 105 PHE PHE A . n A 1 47 LEU 47 106 106 LEU LEU A . n A 1 48 SER 48 107 107 SER SER A . n A 1 49 LYS 49 108 108 LYS LYS A . n A 1 50 SER 50 109 109 SER SER A . n A 1 51 VAL 51 110 110 VAL VAL A . n A 1 52 GLU 52 111 111 GLU GLU A . n A 1 53 GLU 53 112 112 GLU GLU A . n A 1 54 ILE 54 113 113 ILE ILE A . n A 1 55 SER 55 114 114 SER SER A . n A 1 56 ASP 56 115 115 ASP ASP A . n A 1 57 VAL 57 116 116 VAL VAL A . n A 1 58 LEU 58 117 117 LEU LEU A . n A 1 59 ARG 59 118 118 ARG ARG A . n A 1 60 CYS 60 119 119 CYS CYS A . n A 1 61 SER 61 120 120 SER SER A . n A 1 62 VAL 62 121 121 VAL VAL A . n A 1 63 GLU 63 122 122 GLU GLU A . n A 1 64 GLU 64 123 123 GLU GLU A . n A 1 65 LEU 65 124 124 LEU LEU A . n A 1 66 GLU 66 125 125 GLU GLU A . n A 1 67 LYS 67 126 126 LYS LYS A . n A 1 68 VAL 68 127 127 VAL VAL A . n A 1 69 ARG 69 128 128 ARG ARG A . n A 1 70 GLN 70 129 129 GLN GLN A . n A 1 71 LYS 71 130 130 LYS LYS A . n A 1 72 VAL 72 131 131 VAL VAL A . n A 1 73 LEU 73 132 132 LEU LEU A . n A 1 74 ARG 74 133 133 ARG ARG A . n A 1 75 LEU 75 134 134 LEU LEU A . n A 1 76 GLU 76 135 135 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id RNAP 1 mM '[U-100% 13C; U-100% 15N]' 1 RNAP 1 mM '[U-100% 15N]' 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 61 ? ? -87.07 -74.72 2 1 PRO A 64 ? ? -69.78 -169.98 3 1 GLU A 84 ? ? -104.39 -74.63 4 1 LEU A 85 ? ? -54.35 175.77 5 1 GLU A 86 ? ? -175.13 -179.41 6 1 LYS A 88 ? ? -109.88 42.94 7 1 LYS A 108 ? ? -64.99 -169.77 8 2 GLU A 61 ? ? -70.71 -74.40 9 2 PRO A 64 ? ? -69.81 -170.13 10 2 GLU A 84 ? ? -105.29 -74.31 11 2 LEU A 85 ? ? -53.85 175.41 12 2 GLU A 86 ? ? -176.12 -179.45 13 2 LYS A 88 ? ? -106.03 48.54 14 2 GLU A 89 ? ? -138.30 -56.02 15 2 LEU A 100 ? ? -160.33 100.70 16 2 SER A 107 ? ? -52.09 171.53 17 2 LYS A 108 ? ? -70.44 -163.04 18 2 ARG A 118 ? ? 59.78 18.89 19 3 PRO A 64 ? ? -69.73 -170.03 20 3 GLN A 66 ? ? -145.58 41.54 21 3 GLU A 84 ? ? -84.28 -75.11 22 3 LEU A 85 ? ? -51.92 171.76 23 3 LYS A 88 ? ? -107.28 48.20 24 3 GLU A 89 ? ? -139.64 -52.09 25 3 PHE A 105 ? ? -51.39 107.60 26 3 SER A 107 ? ? -53.99 176.83 27 3 LYS A 108 ? ? -62.44 -162.66 28 4 GLU A 61 ? ? -94.27 43.58 29 4 PRO A 64 ? ? -69.77 -170.20 30 4 GLU A 84 ? ? -107.27 -74.84 31 4 LEU A 85 ? ? -52.93 172.99 32 4 GLU A 86 ? ? -173.29 -177.07 33 4 LYS A 88 ? ? -98.38 41.39 34 4 GLU A 89 ? ? -128.81 -59.89 35 4 LEU A 100 ? ? -174.34 112.65 36 4 SER A 107 ? ? -55.28 178.45 37 4 LYS A 108 ? ? -72.43 -161.02 38 5 THR A 62 ? ? -53.99 174.03 39 5 PRO A 64 ? ? -69.75 -170.17 40 5 GLN A 66 ? ? -95.14 35.27 41 5 GLU A 84 ? ? -106.43 -73.75 42 5 LYS A 88 ? ? -95.74 45.38 43 5 GLU A 89 ? ? -133.47 -47.33 44 5 SER A 107 ? ? -52.02 171.79 45 5 LYS A 108 ? ? -60.32 -169.63 46 6 PRO A 64 ? ? -69.78 -169.70 47 6 GLU A 84 ? ? -103.13 -76.56 48 6 LEU A 85 ? ? -53.48 173.23 49 6 LYS A 88 ? ? -98.69 43.97 50 6 GLU A 89 ? ? -134.41 -62.00 51 6 SER A 107 ? ? -56.36 -178.93 52 6 LYS A 108 ? ? -75.97 -159.53 53 7 GLU A 61 ? ? -174.61 -179.34 54 7 PRO A 64 ? ? -69.72 -170.32 55 7 GLU A 84 ? ? -106.70 -75.13 56 7 LEU A 85 ? ? -52.09 171.72 57 7 LYS A 88 ? ? -94.15 49.09 58 7 GLU A 89 ? ? -140.64 -49.69 59 7 LYS A 108 ? ? -72.35 -162.63 60 8 GLU A 61 ? ? -74.80 -72.51 61 8 PRO A 64 ? ? -69.72 -168.02 62 8 GLU A 84 ? ? -106.78 -74.10 63 8 LYS A 88 ? ? -98.00 49.05 64 8 GLU A 89 ? ? -135.93 -46.77 65 8 SER A 107 ? ? -51.41 170.43 66 8 LYS A 108 ? ? -74.02 -156.81 67 9 PRO A 64 ? ? -69.84 -170.58 68 9 GLU A 84 ? ? -105.98 -75.62 69 9 LEU A 85 ? ? -52.29 171.60 70 9 LYS A 88 ? ? -99.72 49.25 71 9 GLU A 89 ? ? -140.20 -55.99 72 9 LYS A 103 ? ? -59.03 97.94 73 9 PHE A 105 ? ? -50.84 105.74 74 9 SER A 107 ? ? -55.09 -179.63 75 9 LYS A 108 ? ? -61.93 -163.76 76 10 PRO A 64 ? ? -69.73 -169.43 77 10 GLU A 84 ? ? -102.97 -74.15 78 10 GLU A 86 ? ? 178.28 129.86 79 10 GLU A 89 ? ? -136.09 -57.84 80 10 SER A 107 ? ? -52.09 172.06 81 10 LYS A 108 ? ? -64.86 -162.28 82 11 THR A 62 ? ? -60.42 -74.59 83 11 PRO A 64 ? ? -69.75 -169.17 84 11 GLU A 84 ? ? -106.74 -74.15 85 11 GLU A 86 ? ? 179.10 119.59 86 11 GLU A 89 ? ? -134.75 -52.29 87 11 LYS A 108 ? ? -67.01 -168.13 88 12 PRO A 64 ? ? -69.80 -169.28 89 12 GLU A 84 ? ? -104.78 -74.49 90 12 LEU A 85 ? ? -54.09 175.77 91 12 GLU A 86 ? ? -177.49 -179.62 92 12 GLU A 89 ? ? -126.77 -59.39 93 12 LYS A 108 ? ? -62.86 -162.26 94 13 PRO A 64 ? ? -69.73 -169.52 95 13 GLU A 84 ? ? -76.39 -75.97 96 13 GLU A 89 ? ? -139.61 -44.88 97 13 LEU A 100 ? ? -165.64 109.80 98 13 PHE A 105 ? ? -50.78 109.48 99 13 SER A 107 ? ? -51.28 171.15 100 13 LYS A 108 ? ? -63.96 -160.56 101 14 GLU A 61 ? ? -88.69 -74.63 102 14 PRO A 64 ? ? -69.72 -169.86 103 14 GLU A 84 ? ? -107.71 -74.45 104 14 LEU A 85 ? ? -52.52 172.46 105 14 LYS A 88 ? ? -94.80 46.72 106 14 GLU A 89 ? ? -138.64 -58.04 107 14 LEU A 100 ? ? -161.04 118.89 108 14 SER A 107 ? ? -52.49 173.63 109 14 LYS A 108 ? ? -62.28 -163.79 110 15 PRO A 64 ? ? -69.79 -170.47 111 15 PRO A 68 ? ? -69.77 -169.13 112 15 GLU A 84 ? ? -77.15 -76.45 113 15 LYS A 88 ? ? -105.46 48.41 114 15 GLU A 89 ? ? -137.21 -50.27 115 15 LEU A 100 ? ? -165.35 96.40 116 15 SER A 107 ? ? -51.80 170.99 117 15 LYS A 108 ? ? -86.18 -159.65 118 16 GLU A 61 ? ? -59.07 -73.01 119 16 PRO A 64 ? ? -69.75 -170.01 120 16 GLU A 84 ? ? -104.80 -72.67 121 16 LEU A 85 ? ? -55.58 178.34 122 16 GLU A 86 ? ? -178.40 -178.20 123 16 LYS A 88 ? ? -107.10 42.30 124 16 GLU A 89 ? ? -129.56 -54.15 125 16 LEU A 100 ? ? -161.45 104.49 126 16 SER A 107 ? ? -51.94 171.42 127 16 LYS A 108 ? ? -74.55 -159.93 128 17 GLU A 61 ? ? -100.50 -73.41 129 17 PRO A 64 ? ? -69.74 -168.83 130 17 GLU A 84 ? ? -86.09 -76.19 131 17 LEU A 85 ? ? -52.43 171.02 132 17 GLU A 86 ? ? -170.06 -177.08 133 17 LYS A 88 ? ? -103.14 42.51 134 17 GLU A 89 ? ? -128.07 -56.43 135 17 LEU A 100 ? ? -162.97 89.13 136 17 SER A 107 ? ? -53.31 173.99 137 17 LYS A 108 ? ? -67.84 -163.07 138 17 ARG A 118 ? ? 57.41 19.56 139 18 PRO A 64 ? ? -69.81 -168.75 140 18 GLU A 84 ? ? -104.90 -73.00 141 18 LEU A 85 ? ? -54.53 174.82 142 18 LYS A 88 ? ? -99.16 49.36 143 18 GLU A 89 ? ? -139.17 -51.18 144 18 SER A 107 ? ? -56.26 -179.49 145 18 LYS A 108 ? ? -66.31 -162.90 146 19 PRO A 64 ? ? -69.76 -165.15 147 19 TYR A 65 ? ? -46.43 -74.43 148 19 PRO A 68 ? ? -69.76 -168.75 149 19 GLU A 84 ? ? -100.78 -74.90 150 19 LEU A 85 ? ? -53.98 175.16 151 19 LYS A 88 ? ? -100.21 48.17 152 19 GLU A 89 ? ? -138.98 -51.56 153 19 GLU A 102 ? ? 74.18 -1.32 154 19 SER A 107 ? ? -52.15 171.60 155 20 PRO A 64 ? ? -69.75 -170.33 156 20 GLN A 66 ? ? -95.38 30.75 157 20 GLU A 84 ? ? -106.31 -75.57 158 20 GLU A 86 ? ? -177.71 142.17 159 20 GLU A 89 ? ? -137.88 -53.76 160 20 SER A 107 ? ? -53.08 173.69 161 20 LYS A 108 ? ? -77.39 -162.45 #