HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-NOV-08 2KAN TITLE SOLUTION NMR STRUCTURE OF UBIQUITIN-LIKE DOMAIN OF ARABIDOPSIS TITLE 2 THALIANA PROTEIN AT2G32350. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TITLE 3 TARGET AR3433A COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN AR3433A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT2G32350; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 14-15C KEYWDS UBIQUITIN FOLD, ALPHA+BETA, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.ELETSKY,J.L.MILLS,D.SUKUMARAN,J.HUA,R.SHASTRY,M.JIANG,C.CICCOSANTI, AUTHOR 2 R.XIAO,J.LIU,J.K.EVERRET,G.V.T.SWAPNA,T.B.ACTON,B.ROST, AUTHOR 3 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (NESG) REVDAT 6 22-MAY-24 2KAN 1 REMARK REVDAT 5 16-MAR-22 2KAN 1 REMARK REVDAT 4 09-JUN-09 2KAN 1 REVDAT REVDAT 3 24-FEB-09 2KAN 1 VERSN REVDAT 2 09-DEC-08 2KAN 1 AUTHOR REVDAT 1 25-NOV-08 2KAN 0 JRNL AUTH A.ELETSKY,J.L.MILLS,D.SUKUMARAN,J.HUA,R.SHASTRY,M.JIANG, JRNL AUTH 2 C.CICCOSANTI,R.XIAO,J.LIU,J.K.EVERRET,G.V.T.SWAPNA, JRNL AUTH 3 T.B.ACTON,B.ROST,G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF UBIQUITIN-LIKE DOMAIN OF JRNL TITL 2 ARABIDOPSIS THALIANA PROTEIN AT2G32350. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMRJ 2.1B, CNS 1.2 REMARK 3 AUTHORS : VARIAN (VNMRJ), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KAN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000100885. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 215 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.09 MM [U-100% 13C; U-100% 15N] REMARK 210 AR3433A PROTEIN, 50 UM DSS, 200 REMARK 210 MM SODIUM CHLORIDE, 20 MM MES, 5 REMARK 210 MM CALCIUM CLORIDE, 10 MM DTT, REMARK 210 0.02 % SODIUM AZIDE, 1 X REMARK 210 PROTEASE INHIBITORS, 90% H2O/10% REMARK 210 D2O; 1.15 MM [U-5% 13C; U-100% REMARK 210 15N] AR3433A PROTEIN, 50 UM DSS, REMARK 210 200 MM SODIUM CHLORIDE, 20 MM REMARK 210 MES, 5 MM CALCIUM CLORIDE, 10 MM REMARK 210 DTT, 0.02 % SODIUM AZIDE, 1 X REMARK 210 PROTEASE INHIBITORS, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 (ALI); 2D 1H-13C CT-HSQC (ALI); REMARK 210 2D 1H-13C HSQC (ARO); 3D HNCO; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-COSY (ALI); REMARK 210 3D HCCH-TOCSY; (4,3)D GFT HCCH- REMARK 210 COSY (ARO); 3D HCCH-COSY (ARO); REMARK 210 3D 1H-15N,13CALI,13CARO NOESY; REMARK 210 2D 1H-15N LR-HSQC (HIS) REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : PROSA 6.0.2, CARA 1.8.4, REMARK 210 AUTOASSIGN 1.15.1, TALOS REMARK 210 2003.027.13.05, CYANA 2.1, REMARK 210 AUTOSTRUCTURE 2.2.1, PSVS 1.3 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 3 -4.25 71.63 REMARK 500 1 SER A 24 -55.29 -150.63 REMARK 500 2 THR A 77 -168.85 -114.55 REMARK 500 2 LYS A 93 -96.47 -87.47 REMARK 500 3 PRO A 23 33.86 -71.92 REMARK 500 3 SER A 24 -53.52 -156.32 REMARK 500 3 SER A 60 -79.63 64.53 REMARK 500 3 GLU A 78 144.78 -172.57 REMARK 500 3 ALA A 92 83.96 -161.16 REMARK 500 4 SER A 9 46.85 -83.71 REMARK 500 4 ALA A 11 105.52 -54.25 REMARK 500 4 SER A 60 -88.67 65.79 REMARK 500 4 THR A 77 -168.43 -103.38 REMARK 500 4 ALA A 92 -158.30 -145.14 REMARK 500 4 LYS A 93 -71.72 -84.61 REMARK 500 5 ASN A 49 40.48 -81.89 REMARK 500 6 HIS A 6 80.99 -152.16 REMARK 500 6 HIS A 7 28.58 177.30 REMARK 500 6 SER A 60 -92.91 65.23 REMARK 500 8 HIS A 5 -76.32 -85.96 REMARK 500 8 HIS A 6 77.30 52.44 REMARK 500 8 ARG A 91 -84.57 -119.07 REMARK 500 9 SER A 60 -95.85 55.59 REMARK 500 10 PHE A 79 25.29 -141.25 REMARK 500 10 SER A 88 43.09 -82.95 REMARK 500 11 THR A 77 -168.54 -109.74 REMARK 500 12 HIS A 5 -78.23 66.54 REMARK 500 12 PRO A 23 34.00 -68.95 REMARK 500 12 SER A 24 -31.12 -162.37 REMARK 500 12 ASN A 49 22.24 -70.47 REMARK 500 12 SER A 60 -80.91 66.65 REMARK 500 13 HIS A 4 91.39 -68.88 REMARK 500 13 HIS A 5 62.24 -117.92 REMARK 500 14 HIS A 3 100.00 -65.03 REMARK 500 14 HIS A 4 73.69 44.40 REMARK 500 14 PRO A 23 45.16 -70.70 REMARK 500 14 SER A 24 -67.45 -165.79 REMARK 500 14 THR A 77 -36.65 -147.41 REMARK 500 14 GLU A 78 135.91 -178.14 REMARK 500 14 LYS A 93 -77.74 -132.36 REMARK 500 15 HIS A 10 -78.05 -80.55 REMARK 500 15 ALA A 11 -178.53 -171.78 REMARK 500 15 ALA A 92 93.86 62.30 REMARK 500 16 HIS A 7 67.37 63.23 REMARK 500 17 SER A 9 95.33 62.07 REMARK 500 17 HIS A 10 -55.88 -154.01 REMARK 500 17 SER A 60 -74.22 66.77 REMARK 500 18 GLU A 78 149.07 178.82 REMARK 500 19 HIS A 10 87.61 -151.63 REMARK 500 19 SER A 24 -60.44 -93.14 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AR3433A RELATED DB: TARGETDB DBREF 2KAN A 10 94 UNP Q9ZV63 Q9ZV63_ARATH 69 153 SEQADV 2KAN MET A 1 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN GLY A 2 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 3 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 4 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 5 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 6 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 7 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN HIS A 8 UNP Q9ZV63 EXPRESSION TAG SEQADV 2KAN SER A 9 UNP Q9ZV63 EXPRESSION TAG SEQRES 1 A 94 MET GLY HIS HIS HIS HIS HIS HIS SER HIS ALA ALA VAL SEQRES 2 A 94 ARG LYS ILE HIS VAL THR VAL LYS PHE PRO SER LYS GLN SEQRES 3 A 94 PHE THR VAL GLU VAL ASP ARG THR GLU THR VAL SER SER SEQRES 4 A 94 LEU LYS ASP LYS ILE HIS ILE VAL GLU ASN THR PRO ILE SEQRES 5 A 94 LYS ARG MET GLN LEU TYR TYR SER GLY ILE GLU LEU ALA SEQRES 6 A 94 ASP ASP TYR ARG ASN LEU ASN GLU TYR GLY ILE THR GLU SEQRES 7 A 94 PHE SER GLU ILE VAL VAL PHE LEU LYS SER ILE ASN ARG SEQRES 8 A 94 ALA LYS ASP HELIX 1 1 THR A 36 GLU A 48 1 13 HELIX 2 2 ASN A 70 GLY A 75 1 6 SHEET 1 A 5 GLN A 26 VAL A 31 0 SHEET 2 A 5 ILE A 16 LYS A 21 -1 N VAL A 20 O PHE A 27 SHEET 3 A 5 SER A 80 LEU A 86 1 O VAL A 84 N LYS A 21 SHEET 4 A 5 MET A 55 TYR A 59 -1 N TYR A 58 O VAL A 83 SHEET 5 A 5 ILE A 62 LEU A 64 -1 O LEU A 64 N LEU A 57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1