HEADER CELL ADHESION 10-DEC-08 2KBX TITLE SOLUTION STRUCTURE OF ILK-PINCH COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN-LINKED PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: ILK-1, ILK-2, 59 KDA SERINE/THREONINE-PROTEIN KINASE, COMPND 6 P59ILK; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: LIM AND SENESCENT CELL ANTIGEN-LIKE-CONTAINING DOMAIN COMPND 11 PROTEIN 1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: LIM ZINC-BINDING 1 DOMAIN; COMPND 14 SYNONYM: PARTICULARLY INTERESTING NEW CYS-HIS PROTEIN 1, PINCH-1, COMPND 15 RENAL CARCINOMA ANTIGEN NY-REN-48; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ILK, ILK1, ILK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PGEX; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: LIMS1, PINCH, PINCH1; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PGEX KEYWDS CYTOSKELETAL REGULATORS, ANK REPEAT, ATP-BINDING, CELL JUNCTION, CELL KEYWDS 2 MEMBRANE, KINASE, MEMBRANE, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, KEYWDS 3 SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE, ACETYLATION, LIM KEYWDS 4 DOMAIN, METAL-BINDING, ZINC, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.QIN REVDAT 2 16-MAR-22 2KBX 1 REMARK REVDAT 1 30-DEC-08 2KBX 0 JRNL AUTH J.QIN JRNL TITL CYTOSKETAL PROTEINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: C-N BOND DISTANCE BETWEEN PHE 42 AND REMARK 3 GLN 43 CHAIN B IS IN THE RANGE OF 1.16-1.21A IN ALL MODELS. REMARK 4 REMARK 4 2KBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000100929. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 30 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.1-0.5 MM [U-100% 15N] INTEGRIN REMARK 210 -LINKED PROTEIN KINASE, 0.1-0.5 REMARK 210 MM [U-100% 13C; U-100% 15N] LIM REMARK 210 AND SENESCENT CELL ANTIGEN-LIKE- REMARK 210 CONTAINING DOMAIN PROTEIN 1, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS B 41 H GLN B 43 1.12 REMARK 500 O HIS B 32 H CYS B 35 1.40 REMARK 500 O CYS B 38 H PHE B 42 1.45 REMARK 500 O PRO A 70 H ALA A 74 1.46 REMARK 500 O GLN B 64 H ALA B 68 1.48 REMARK 500 H ASP A 2 OG1 THR A 6 1.51 REMARK 500 O ASN A 12 H ALA A 15 1.53 REMARK 500 C CYS B 41 H GLN B 43 1.56 REMARK 500 O ARG A 149 H GLU A 153 1.56 REMARK 500 H GLU B 11 O LEU B 30 1.57 REMARK 500 O VAL B 24 H TYR B 31 1.59 REMARK 500 O CYS B 38 N PHE B 42 1.79 REMARK 500 O CYS B 41 N GLN B 43 2.07 REMARK 500 O CYS B 38 CA PHE B 42 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 PRO B 19 CD PRO B 19 N -0.121 REMARK 500 2 PRO B 19 CD PRO B 19 N -0.120 REMARK 500 2 PHE B 42 C GLN B 43 N -0.153 REMARK 500 3 PRO B 19 CD PRO B 19 N -0.122 REMARK 500 3 PHE B 42 C GLN B 43 N -0.154 REMARK 500 4 PRO B 19 CD PRO B 19 N -0.121 REMARK 500 4 PHE B 42 C GLN B 43 N -0.153 REMARK 500 5 PRO B 19 CD PRO B 19 N -0.120 REMARK 500 5 PHE B 42 C GLN B 43 N -0.155 REMARK 500 6 PRO B 19 CD PRO B 19 N -0.120 REMARK 500 6 PHE B 42 C GLN B 43 N -0.163 REMARK 500 7 PRO B 19 CD PRO B 19 N -0.120 REMARK 500 7 PHE B 42 C GLN B 43 N -0.157 REMARK 500 8 PRO B 19 CD PRO B 19 N -0.124 REMARK 500 8 PHE B 42 C GLN B 43 N -0.154 REMARK 500 9 PRO B 19 CD PRO B 19 N -0.094 REMARK 500 9 PHE B 42 C GLN B 43 N -0.160 REMARK 500 10 PRO B 19 CD PRO B 19 N -0.094 REMARK 500 10 PHE B 42 C GLN B 43 N -0.141 REMARK 500 11 PRO B 19 CD PRO B 19 N -0.122 REMARK 500 11 PHE B 42 C GLN B 43 N -0.160 REMARK 500 12 PRO B 19 CD PRO B 19 N -0.123 REMARK 500 12 PHE B 42 C GLN B 43 N -0.145 REMARK 500 13 PRO B 19 CD PRO B 19 N -0.121 REMARK 500 13 PHE B 42 C GLN B 43 N -0.150 REMARK 500 14 PRO B 19 CD PRO B 19 N -0.103 REMARK 500 14 PHE B 42 C GLN B 43 N -0.162 REMARK 500 15 PRO B 19 CD PRO B 19 N -0.096 REMARK 500 16 PRO B 19 CD PRO B 19 N -0.120 REMARK 500 16 PHE B 42 C GLN B 43 N -0.177 REMARK 500 17 PRO B 19 CD PRO B 19 N -0.119 REMARK 500 17 PHE B 42 C GLN B 43 N -0.159 REMARK 500 18 PRO B 19 CD PRO B 19 N -0.121 REMARK 500 18 PHE B 42 C GLN B 43 N -0.156 REMARK 500 19 PRO B 19 CD PRO B 19 N -0.123 REMARK 500 20 PRO B 19 CD PRO B 19 N -0.122 REMARK 500 20 PHE B 42 C GLN B 43 N -0.178 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 PRO B 19 CA - N - CD ANGL. DEV. = 11.9 DEGREES REMARK 500 1 PRO B 19 N - CA - CB ANGL. DEV. = -9.9 DEGREES REMARK 500 1 PRO B 19 N - CA - C ANGL. DEV. = 26.8 DEGREES REMARK 500 1 GLN B 43 N - CA - C ANGL. DEV. = -17.0 DEGREES REMARK 500 2 PRO B 19 CA - N - CD ANGL. DEV. = 11.3 DEGREES REMARK 500 2 PRO B 19 N - CA - CB ANGL. DEV. = -10.3 DEGREES REMARK 500 2 PRO B 19 N - CA - C ANGL. DEV. = 26.9 DEGREES REMARK 500 2 PRO B 19 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 3 PRO B 19 CA - N - CD ANGL. DEV. = 11.9 DEGREES REMARK 500 3 PRO B 19 N - CA - CB ANGL. DEV. = -9.9 DEGREES REMARK 500 3 PRO B 19 N - CA - C ANGL. DEV. = 26.8 DEGREES REMARK 500 4 PRO B 19 CA - N - CD ANGL. DEV. = 11.9 DEGREES REMARK 500 4 PRO B 19 N - CA - CB ANGL. DEV. = -9.9 DEGREES REMARK 500 4 PRO B 19 N - CA - C ANGL. DEV. = 26.7 DEGREES REMARK 500 5 PRO B 19 CA - N - CD ANGL. DEV. = 11.6 DEGREES REMARK 500 5 PRO B 19 N - CA - CB ANGL. DEV. = -10.2 DEGREES REMARK 500 5 PRO B 19 N - CA - C ANGL. DEV. = 26.6 DEGREES REMARK 500 6 PRO B 19 CA - N - CD ANGL. DEV. = 11.5 DEGREES REMARK 500 6 PRO B 19 N - CA - CB ANGL. DEV. = -10.3 DEGREES REMARK 500 6 PRO B 19 N - CA - C ANGL. DEV. = 26.7 DEGREES REMARK 500 6 PRO B 19 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 6 GLN B 43 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 6 TYR B 58 CB - CG - CD1 ANGL. DEV. = -4.3 DEGREES REMARK 500 7 PRO B 19 CA - N - CD ANGL. DEV. = 11.4 DEGREES REMARK 500 7 PRO B 19 N - CA - CB ANGL. DEV. = -10.2 DEGREES REMARK 500 7 PRO B 19 N - CA - C ANGL. DEV. = 26.8 DEGREES REMARK 500 7 PRO B 19 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 8 PRO B 19 CA - N - CD ANGL. DEV. = 12.4 DEGREES REMARK 500 8 PRO B 19 N - CA - CB ANGL. DEV. = -8.5 DEGREES REMARK 500 8 PRO B 19 N - CA - C ANGL. DEV. = 26.3 DEGREES REMARK 500 8 PHE B 50 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 9 PRO B 19 CA - N - CD ANGL. DEV. = 9.0 DEGREES REMARK 500 9 PRO B 19 N - CA - CB ANGL. DEV. = -10.2 DEGREES REMARK 500 9 PRO B 19 N - CA - C ANGL. DEV. = 31.4 DEGREES REMARK 500 9 PRO B 19 CA - C - N ANGL. DEV. = -14.9 DEGREES REMARK 500 9 GLN B 43 N - CA - C ANGL. DEV. = -17.2 DEGREES REMARK 500 10 ALA B 18 N - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 10 PRO B 19 CA - N - CD ANGL. DEV. = 8.8 DEGREES REMARK 500 10 PRO B 19 N - CA - CB ANGL. DEV. = -10.4 DEGREES REMARK 500 10 PRO B 19 N - CA - C ANGL. DEV. = 31.2 DEGREES REMARK 500 10 PRO B 19 CA - C - N ANGL. DEV. = -14.5 DEGREES REMARK 500 11 PRO B 19 CA - N - CD ANGL. DEV. = 12.5 DEGREES REMARK 500 11 PRO B 19 N - CA - CB ANGL. DEV. = -8.6 DEGREES REMARK 500 11 PRO B 19 N - CA - C ANGL. DEV. = 26.5 DEGREES REMARK 500 11 PHE B 50 CB - CG - CD1 ANGL. DEV. = -4.6 DEGREES REMARK 500 11 TYR B 58 CB - CG - CD1 ANGL. DEV. = -4.0 DEGREES REMARK 500 12 PRO B 19 CA - N - CD ANGL. DEV. = 12.6 DEGREES REMARK 500 12 PRO B 19 N - CA - CB ANGL. DEV. = -8.6 DEGREES REMARK 500 12 PRO B 19 N - CA - C ANGL. DEV. = 26.1 DEGREES REMARK 500 12 GLN B 43 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 78 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 38.55 -82.44 REMARK 500 1 ASP A 3 -125.33 52.76 REMARK 500 1 ALA A 13 -17.37 -41.87 REMARK 500 1 ASP A 21 47.83 -84.20 REMARK 500 1 ASN A 25 76.80 54.06 REMARK 500 1 ASP A 26 -47.71 -152.91 REMARK 500 1 LEU A 27 -8.36 -50.34 REMARK 500 1 ASN A 28 33.11 -75.41 REMARK 500 1 ALA A 48 -85.14 -52.82 REMARK 500 1 ASN A 64 170.98 -58.96 REMARK 500 1 ASP A 67 84.98 81.19 REMARK 500 1 HIS A 77 -60.36 -92.14 REMARK 500 1 ASP A 92 36.46 -84.40 REMARK 500 1 ASN A 94 25.14 -78.92 REMARK 500 1 ASN A 97 -132.71 -88.70 REMARK 500 1 ALA A 124 -18.59 -46.75 REMARK 500 1 LEU A 125 119.42 62.24 REMARK 500 1 SER A 127 35.56 -94.35 REMARK 500 1 CYS A 129 101.14 90.14 REMARK 500 1 ASN A 130 -136.04 -59.54 REMARK 500 1 GLU A 134 77.90 -63.20 REMARK 500 1 LEU A 144 39.35 87.34 REMARK 500 1 GLU A 146 -18.08 79.07 REMARK 500 1 GLN A 157 -55.49 -163.21 REMARK 500 1 TYR A 164 -143.38 -148.43 REMARK 500 1 ASP A 166 37.78 -171.43 REMARK 500 1 THR A 167 -51.12 -162.71 REMARK 500 1 TRP A 169 -27.10 -161.54 REMARK 500 1 LYS A 170 -103.95 -139.20 REMARK 500 1 ALA B 2 173.98 54.81 REMARK 500 1 ASN B 3 -103.90 -175.38 REMARK 500 1 LEU B 5 46.25 -82.86 REMARK 500 1 ALA B 8 128.27 62.95 REMARK 500 1 ARG B 12 -39.49 -131.94 REMARK 500 1 PRO B 19 50.05 -91.46 REMARK 500 1 GLU B 21 -85.41 -98.60 REMARK 500 1 ASN B 27 -33.96 90.35 REMARK 500 1 GLU B 33 -3.13 -58.01 REMARK 500 1 PHE B 42 28.37 -46.73 REMARK 500 1 PRO B 69 -162.46 -57.19 REMARK 500 2 ASP A 2 -100.01 -78.34 REMARK 500 2 ASP A 3 -131.64 52.19 REMARK 500 2 GLN A 7 -8.10 -58.74 REMARK 500 2 GLU A 10 -0.09 -59.40 REMARK 500 2 ALA A 13 -19.91 -41.27 REMARK 500 2 ASP A 21 41.72 -98.33 REMARK 500 2 ASN A 25 71.86 53.31 REMARK 500 2 ASP A 26 -36.11 -149.29 REMARK 500 2 ASN A 28 26.12 -73.58 REMARK 500 2 ARG A 46 58.45 -68.19 REMARK 500 REMARK 500 THIS ENTRY HAS 763 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 19 TYR B 51 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 1 ALA B 18 10.42 REMARK 500 2 ALA B 18 10.86 REMARK 500 3 ALA B 18 10.53 REMARK 500 4 ALA B 18 10.51 REMARK 500 5 ALA B 18 10.94 REMARK 500 6 ALA B 18 10.73 REMARK 500 7 ALA B 18 10.90 REMARK 500 8 ALA B 18 10.02 REMARK 500 11 ALA B 18 10.09 REMARK 500 12 ALA B 18 10.03 REMARK 500 13 ALA B 18 10.32 REMARK 500 16 ALA B 18 11.15 REMARK 500 17 ALA B 18 11.24 REMARK 500 18 ALA B 18 10.11 REMARK 500 19 ALA B 18 10.28 REMARK 500 20 ALA B 18 10.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 298 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 10 SG REMARK 620 2 CYS B 13 SG 119.7 REMARK 620 3 HIS B 32 ND1 116.6 100.0 REMARK 620 4 CYS B 35 SG 64.7 124.5 128.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 299 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 38 SG REMARK 620 2 CYS B 41 SG 104.2 REMARK 620 3 CYS B 59 SG 109.0 127.6 REMARK 620 4 ASP B 62 OD2 119.9 100.6 96.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 299 DBREF 2KBX A 1 171 UNP Q13418 ILK_HUMAN 1 171 DBREF 2KBX B 1 70 UNP P48059 LIMS1_HUMAN 1 70 SEQRES 1 A 171 MET ASP ASP ILE PHE THR GLN CYS ARG GLU GLY ASN ALA SEQRES 2 A 171 VAL ALA VAL ARG LEU TRP LEU ASP ASN THR GLU ASN ASP SEQRES 3 A 171 LEU ASN GLN GLY ASP ASP HIS GLY PHE SER PRO LEU HIS SEQRES 4 A 171 TRP ALA CYS ARG GLU GLY ARG SER ALA VAL VAL GLU MET SEQRES 5 A 171 LEU ILE MET ARG GLY ALA ARG ILE ASN VAL MET ASN ARG SEQRES 6 A 171 GLY ASP ASP THR PRO LEU HIS LEU ALA ALA SER HIS GLY SEQRES 7 A 171 HIS ARG ASP ILE VAL GLN LYS LEU LEU GLN TYR LYS ALA SEQRES 8 A 171 ASP ILE ASN ALA VAL ASN GLU HIS GLY ASN VAL PRO LEU SEQRES 9 A 171 HIS TYR ALA CYS PHE TRP GLY GLN ASP GLN VAL ALA GLU SEQRES 10 A 171 ASP LEU VAL ALA ASN GLY ALA LEU VAL SER ILE CYS ASN SEQRES 11 A 171 LYS TYR GLY GLU MET PRO VAL ASP LYS ALA LYS ALA PRO SEQRES 12 A 171 LEU ARG GLU LEU LEU ARG GLU ARG ALA GLU LYS MET GLY SEQRES 13 A 171 GLN ASN LEU ASN ARG ILE PRO TYR LYS ASP THR PHE TRP SEQRES 14 A 171 LYS GLY SEQRES 1 B 70 MET ALA ASN ALA LEU ALA SER ALA THR CYS GLU ARG CYS SEQRES 2 B 70 LYS GLY GLY PHE ALA PRO ALA GLU LYS ILE VAL ASN SER SEQRES 3 B 70 ASN GLY GLU LEU TYR HIS GLU GLN CYS PHE VAL CYS ALA SEQRES 4 B 70 GLN CYS PHE GLN GLN PHE PRO GLU GLY LEU PHE TYR GLU SEQRES 5 B 70 PHE GLU GLY ARG LYS TYR CYS GLU HIS ASP PHE GLN MET SEQRES 6 B 70 LEU PHE ALA PRO CYS HET ZN B 298 1 HET ZN B 299 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) HELIX 1 1 ASP A 2 ARG A 9 1 8 HELIX 2 2 ASN A 12 ASP A 21 1 10 HELIX 3 3 SER A 36 GLY A 45 1 10 HELIX 4 4 ARG A 46 GLY A 57 1 12 HELIX 5 5 THR A 69 GLY A 78 1 10 HELIX 6 6 HIS A 79 GLN A 88 1 10 HELIX 7 7 ALA A 91 ALA A 95 5 5 HELIX 8 8 VAL A 102 GLY A 111 1 10 HELIX 9 9 GLN A 112 ALA A 121 1 10 HELIX 10 10 MET A 135 ALA A 142 1 8 HELIX 11 11 GLU A 146 LYS A 154 1 9 HELIX 12 12 PHE B 45 LEU B 49 5 5 HELIX 13 13 CYS B 59 ALA B 68 1 10 SHEET 1 A 2 VAL B 24 SER B 26 0 SHEET 2 A 2 GLU B 29 TYR B 31 -1 O TYR B 31 N VAL B 24 SHEET 1 B 2 TYR B 51 PHE B 53 0 SHEET 2 B 2 ARG B 56 TYR B 58 -1 O ARG B 56 N PHE B 53 SSBOND 1 CYS B 10 CYS B 35 1555 1555 2.46 LINK SG CYS B 10 ZN ZN B 298 1555 1555 2.29 LINK SG CYS B 13 ZN ZN B 298 1555 1555 2.30 LINK ND1 HIS B 32 ZN ZN B 298 1555 1555 2.00 LINK SG CYS B 35 ZN ZN B 298 1555 1555 2.30 LINK SG CYS B 38 ZN ZN B 299 1555 1555 2.30 LINK SG CYS B 41 ZN ZN B 299 1555 1555 2.30 LINK SG CYS B 59 ZN ZN B 299 1555 1555 2.29 LINK OD2 ASP B 62 ZN ZN B 299 1555 1555 1.99 SITE 1 AC1 4 CYS B 10 GLU B 11 ARG B 12 CYS B 13 SITE 1 AC2 5 HIS A 99 CYS B 38 GLN B 40 CYS B 41 SITE 2 AC2 5 GLN B 43 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1