HEADER TRANSCRIPTION REGULATOR 10-JAN-09 2KDK TITLE STRUCTURE OF HUMAN CIRCADIAN CLOCK PROTEIN BMAL2 C-TERMINAL PAS DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR-LIKE PROTEIN COMPND 3 2; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: BRAIN AND MUSCLE ARNT-LIKE 2, MEMBER OF PAS PROTEIN 9, COMPND 6 BASIC-HELIX-LOOP-HELIX-PAS PROTEIN MOP9, CYCLE-LIKE FACTOR, CLIF; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARNTL2, BMAL2, CLIF, MOP9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PTEV KEYWDS CIRCADIAN CLOCK, PAS DOMAIN, TRANSCRIPTION, ACTIVATOR, BIOLOGICAL KEYWDS 2 RHYTHMS, DNA-BINDING, NUCLEUS, TRANSCRIPTION REGULATION, KEYWDS 3 TRANSCRIPTION REGULATOR EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR E.WASIELEWSKI,C.CORREIA,F.G.PRENDERGAST,G.MER REVDAT 3 20-OCT-21 2KDK 1 REMARK SEQADV REVDAT 2 26-OCT-11 2KDK 1 VERSN REVDAT 1 13-APR-11 2KDK 0 JRNL AUTH C.CORREIA,E.WASIELEWSKI,F.G.PRENDERGAST,G.MER JRNL TITL STRUCTURE OF HUMAN CIRCADIAN CLOCK PROTEIN BMAL2 C-TERMINAL JRNL TITL 2 PAS DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, AMBER 8.0 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), CASE, DARDEN, CHEATHAM, REMARK 3 III, SIMMERLING, WANG, DUKE, LUO, ... AND KOLLM REMARK 3 (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AMBER 8.0 REMARK 4 REMARK 4 2KDK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000100987. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-100% 15N] BMAL2 PAS-B REMARK 210 -1, 50 MM SODIUM PHOSPHATE-2, 50 REMARK 210 MM SODIUM CHLORIDE-3, 2 MM DTT-4, REMARK 210 0.5 MM DSS-5, 93% H2O/7% D2O; REMARK 210 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 BMAL2 PAS-B-6, 50 MM SODIUM REMARK 210 PHOSPHATE-7, 50 MM SODIUM REMARK 210 CHLORIDE-8, 2 MM DTT-9, 0.5 MM REMARK 210 DSS-10, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N TOCSY; REMARK 210 3D 1H-15N NOESY; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HBHA(CO)NH; 3D CCH-TOCSY; REMARK 210 3D CCH-COSY; 3D 1H-13C NOESY; 3D REMARK 210 1H-13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW, SANE, CYANA, REMARK 210 PROCHECKNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A 306 REMARK 465 HIS A 307 REMARK 465 MET A 308 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 PRO A 317 CA - N - CD ANGL. DEV. = -9.6 DEGREES REMARK 500 1 TYR A 343 CB - CG - CD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 1 TYR A 343 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 2 TYR A 343 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 2 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 2 VAL A 372 CB - CA - C ANGL. DEV. = 11.4 DEGREES REMARK 500 2 PRO A 406 C - N - CD ANGL. DEV. = -17.8 DEGREES REMARK 500 3 THR A 322 CA - CB - CG2 ANGL. DEV. = 8.4 DEGREES REMARK 500 3 TYR A 343 CA - CB - CG ANGL. DEV. = 13.2 DEGREES REMARK 500 3 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 3 HIS A 369 CB - CG - CD2 ANGL. DEV. = -10.4 DEGREES REMARK 500 3 ARG A 387 CB - CA - C ANGL. DEV. = 15.5 DEGREES REMARK 500 3 PRO A 406 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 4 TYR A 343 CA - CB - CG ANGL. DEV. = 13.0 DEGREES REMARK 500 4 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 4 TYR A 356 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 4 ARG A 387 CB - CA - C ANGL. DEV. = 12.9 DEGREES REMARK 500 5 TYR A 343 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 5 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 5 TYR A 356 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 5 ARG A 387 CB - CA - C ANGL. DEV. = 17.4 DEGREES REMARK 500 6 PRO A 317 CA - N - CD ANGL. DEV. = -9.3 DEGREES REMARK 500 6 TYR A 343 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 6 TYR A 343 CB - CG - CD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 6 TYR A 343 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 6 TYR A 356 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 6 PRO A 406 C - N - CD ANGL. DEV. = -16.8 DEGREES REMARK 500 7 PRO A 317 CA - N - CD ANGL. DEV. = -9.4 DEGREES REMARK 500 7 TYR A 343 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 7 TYR A 343 CB - CG - CD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 7 TYR A 343 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 7 TYR A 354 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 7 TYR A 356 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 7 PRO A 406 C - N - CD ANGL. DEV. = -16.9 DEGREES REMARK 500 8 PRO A 317 CA - N - CD ANGL. DEV. = -9.0 DEGREES REMARK 500 8 TYR A 343 CA - CB - CG ANGL. DEV. = 12.2 DEGREES REMARK 500 8 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 8 ALA A 388 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 9 TYR A 343 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 9 TYR A 343 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 9 PRO A 406 C - N - CD ANGL. DEV. = -13.7 DEGREES REMARK 500 10 PRO A 317 CA - N - CD ANGL. DEV. = -9.5 DEGREES REMARK 500 10 TYR A 343 CA - CB - CG ANGL. DEV. = 12.2 DEGREES REMARK 500 10 TYR A 343 CB - CG - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 10 PRO A 406 C - N - CD ANGL. DEV. = -14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 317 -112.96 -140.59 REMARK 500 1 THR A 318 41.38 -140.62 REMARK 500 1 VAL A 326 79.03 -65.65 REMARK 500 1 ASN A 327 -13.96 -155.90 REMARK 500 1 PRO A 345 50.13 -56.09 REMARK 500 1 GLN A 346 -24.48 -168.37 REMARK 500 1 SER A 352 99.53 -66.11 REMARK 500 1 ASP A 361 -12.02 84.72 REMARK 500 1 GLU A 377 29.93 -152.39 REMARK 500 1 PRO A 406 81.73 -63.17 REMARK 500 2 ILE A 313 50.12 -147.05 REMARK 500 2 LYS A 316 143.98 127.20 REMARK 500 2 ASN A 327 -3.64 -145.10 REMARK 500 2 PRO A 345 54.43 -60.60 REMARK 500 2 GLN A 346 -31.40 -163.53 REMARK 500 2 SER A 352 104.94 -56.90 REMARK 500 2 TYR A 354 24.51 -79.32 REMARK 500 2 ASP A 361 -22.25 122.42 REMARK 500 2 GLU A 377 36.03 -163.59 REMARK 500 2 ALA A 388 168.04 -49.38 REMARK 500 2 LYS A 389 -81.60 -5.28 REMARK 500 2 ASP A 390 17.26 -145.94 REMARK 500 2 ASN A 405 -179.53 -62.05 REMARK 500 3 ASN A 314 -22.32 -141.26 REMARK 500 3 VAL A 315 -79.56 65.92 REMARK 500 3 LYS A 316 161.18 60.62 REMARK 500 3 PRO A 317 -157.55 -74.58 REMARK 500 3 ILE A 340 -91.82 -74.51 REMARK 500 3 PRO A 345 55.13 -62.52 REMARK 500 3 GLN A 346 -30.17 -160.47 REMARK 500 3 CYS A 353 -6.18 -57.59 REMARK 500 3 GLU A 355 -41.07 -132.59 REMARK 500 3 ASP A 361 -23.74 169.37 REMARK 500 3 GLU A 377 18.83 -169.30 REMARK 500 3 ARG A 387 -139.00 -119.03 REMARK 500 3 LYS A 397 109.40 -163.01 REMARK 500 4 ASN A 314 48.83 -150.28 REMARK 500 4 LYS A 316 -11.79 -149.98 REMARK 500 4 PRO A 317 -116.47 -60.62 REMARK 500 4 THR A 318 52.21 -162.28 REMARK 500 4 ILE A 340 -85.71 -72.30 REMARK 500 4 PRO A 345 53.53 -62.66 REMARK 500 4 GLN A 346 -33.10 -160.31 REMARK 500 4 SER A 352 98.86 -62.03 REMARK 500 4 TYR A 354 42.07 -86.06 REMARK 500 4 GLU A 355 -39.54 -143.75 REMARK 500 4 PHE A 357 -140.19 -77.74 REMARK 500 4 ASP A 361 -24.29 125.06 REMARK 500 4 GLU A 377 17.34 -155.00 REMARK 500 4 ARG A 387 -139.36 -105.04 REMARK 500 REMARK 500 THIS ENTRY HAS 136 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 316 PRO A 317 1 72.97 REMARK 500 LEU A 344 PRO A 345 1 130.81 REMARK 500 ASN A 405 PRO A 406 1 -74.10 REMARK 500 PRO A 406 ASP A 407 1 147.79 REMARK 500 PRO A 317 THR A 318 2 -145.51 REMARK 500 LEU A 344 PRO A 345 2 134.55 REMARK 500 ASN A 405 PRO A 406 2 144.73 REMARK 500 PRO A 406 ASP A 407 2 147.55 REMARK 500 PRO A 317 THR A 318 3 -145.59 REMARK 500 LEU A 344 PRO A 345 3 136.24 REMARK 500 PRO A 406 ASP A 407 3 135.44 REMARK 500 LYS A 316 PRO A 317 4 -73.34 REMARK 500 LEU A 344 PRO A 345 4 136.79 REMARK 500 ASN A 405 PRO A 406 4 -75.71 REMARK 500 PRO A 406 ASP A 407 4 147.54 REMARK 500 LYS A 316 PRO A 317 5 -61.52 REMARK 500 LEU A 344 PRO A 345 5 139.19 REMARK 500 ASN A 405 PRO A 406 5 -73.21 REMARK 500 PRO A 406 ASP A 407 5 147.43 REMARK 500 LYS A 316 PRO A 317 6 80.10 REMARK 500 LEU A 344 PRO A 345 6 140.34 REMARK 500 ASN A 405 PRO A 406 6 146.32 REMARK 500 PRO A 406 ASP A 407 6 135.46 REMARK 500 LYS A 316 PRO A 317 7 78.97 REMARK 500 LEU A 344 PRO A 345 7 138.45 REMARK 500 ASN A 405 PRO A 406 7 129.10 REMARK 500 PRO A 406 ASP A 407 7 134.16 REMARK 500 LYS A 316 PRO A 317 8 68.82 REMARK 500 LEU A 344 PRO A 345 8 130.68 REMARK 500 ASN A 405 PRO A 406 8 -75.76 REMARK 500 LYS A 316 PRO A 317 9 34.17 REMARK 500 LEU A 344 PRO A 345 9 134.03 REMARK 500 PRO A 406 ASP A 407 9 143.84 REMARK 500 LYS A 316 PRO A 317 10 71.46 REMARK 500 LEU A 344 PRO A 345 10 135.87 REMARK 500 PRO A 406 ASP A 407 10 135.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 HIS A 369 0.17 SIDE CHAIN REMARK 500 2 TYR A 343 0.09 SIDE CHAIN REMARK 500 2 HIS A 369 0.17 SIDE CHAIN REMARK 500 2 TYR A 384 0.08 SIDE CHAIN REMARK 500 2 ARG A 387 0.09 SIDE CHAIN REMARK 500 3 TYR A 343 0.07 SIDE CHAIN REMARK 500 3 HIS A 369 0.26 SIDE CHAIN REMARK 500 4 TYR A 343 0.10 SIDE CHAIN REMARK 500 4 HIS A 369 0.15 SIDE CHAIN REMARK 500 5 TYR A 332 0.06 SIDE CHAIN REMARK 500 5 TYR A 343 0.10 SIDE CHAIN REMARK 500 5 HIS A 369 0.13 SIDE CHAIN REMARK 500 5 TYR A 384 0.11 SIDE CHAIN REMARK 500 6 PHE A 320 0.08 SIDE CHAIN REMARK 500 6 TYR A 332 0.11 SIDE CHAIN REMARK 500 6 HIS A 369 0.15 SIDE CHAIN REMARK 500 7 HIS A 369 0.14 SIDE CHAIN REMARK 500 8 HIS A 369 0.13 SIDE CHAIN REMARK 500 8 TYR A 384 0.10 SIDE CHAIN REMARK 500 9 TYR A 343 0.07 SIDE CHAIN REMARK 500 9 HIS A 369 0.15 SIDE CHAIN REMARK 500 9 TYR A 384 0.08 SIDE CHAIN REMARK 500 10 PHE A 320 0.08 SIDE CHAIN REMARK 500 10 TYR A 332 0.07 SIDE CHAIN REMARK 500 10 TYR A 356 0.09 SIDE CHAIN REMARK 500 10 HIS A 369 0.14 SIDE CHAIN REMARK 500 10 TYR A 384 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 1 LEU A 344 -12.51 REMARK 500 2 LEU A 344 -11.29 REMARK 500 3 LEU A 344 -11.45 REMARK 500 4 LEU A 344 -11.51 REMARK 500 5 LEU A 344 -10.10 REMARK 500 6 LEU A 344 -10.12 REMARK 500 7 LEU A 344 -10.55 REMARK 500 8 LEU A 344 -10.49 REMARK 500 9 LEU A 344 -11.62 REMARK 500 10 LEU A 344 -11.77 REMARK 500 REMARK 500 REMARK: NULL DBREF 2KDK A 309 426 UNP Q8WYA1 BMAL2_HUMAN 360 477 SEQADV 2KDK GLY A 306 UNP Q8WYA1 EXPRESSION TAG SEQADV 2KDK HIS A 307 UNP Q8WYA1 EXPRESSION TAG SEQADV 2KDK MET A 308 UNP Q8WYA1 EXPRESSION TAG SEQADV 2KDK ASP A 407 UNP Q8WYA1 TRP 458 ENGINEERED MUTATION SEQRES 1 A 121 GLY HIS MET ASN SER GLY GLU ILE ASN VAL LYS PRO THR SEQRES 2 A 121 GLU PHE ILE THR ARG PHE ALA VAL ASN GLY LYS PHE VAL SEQRES 3 A 121 TYR VAL ASP GLN ARG ALA THR ALA ILE LEU GLY TYR LEU SEQRES 4 A 121 PRO GLN GLU LEU LEU GLY THR SER CYS TYR GLU TYR PHE SEQRES 5 A 121 HIS GLN ASP ASP HIS ASN ASN LEU THR ASP LYS HIS LYS SEQRES 6 A 121 ALA VAL LEU GLN SER LYS GLU LYS ILE LEU THR ASP SER SEQRES 7 A 121 TYR LYS PHE ARG ALA LYS ASP GLY SER PHE VAL THR LEU SEQRES 8 A 121 LYS SER GLN TRP PHE SER PHE THR ASN PRO ASP THR LYS SEQRES 9 A 121 GLU LEU GLU TYR ILE VAL SER VAL ASN THR LEU VAL LEU SEQRES 10 A 121 GLY HIS SER GLU HELIX 1 1 GLN A 335 LEU A 341 1 7 HELIX 2 2 ASP A 361 GLN A 374 1 14 SHEET 1 A 5 PHE A 330 VAL A 333 0 SHEET 2 A 5 GLU A 319 PHE A 324 -1 N ARG A 323 O TYR A 332 SHEET 3 A 5 LEU A 411 THR A 419 -1 O ILE A 414 N PHE A 324 SHEET 4 A 5 PHE A 393 THR A 404 -1 N PHE A 403 O TYR A 413 SHEET 5 A 5 ILE A 379 ARG A 387 -1 N TYR A 384 O LEU A 396 CISPEP 1 LYS A 316 PRO A 317 2 -13.28 CISPEP 2 LYS A 316 PRO A 317 3 -15.65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1