HEADER MEMBRANE PROTEIN 22-JAN-09 2KE4 TITLE THE NMR STRUCTURE OF THE TC10 AND CDC42 INTERACTING DOMAIN OF CIP4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDC42-INTERACTING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 328-425; COMPND 5 SYNONYM: THYROID RECEPTOR-INTERACTING PROTEIN 10, TRIP-10, PROTEIN COMPND 6 FELIC, SALT TOLERANT PROTEIN, HSTP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIP10, CIP4, STOT, STP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGB1HPS KEYWDS CIP4, CDC42, TC10, COILED-COIL, ALTERNATIVE SPLICING, CELL MEMBRANE, KEYWDS 2 COILED COIL, CYTOPLASM, CYTOSKELETON, ENDOCYTOSIS, GOLGI APPARATUS, KEYWDS 3 LIPID-BINDING, LYSOSOME, MEMBRANE, PHOSPHOPROTEIN, SH3 DOMAIN, KEYWDS 4 MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.KUMETA,D.KANOH,Y.KOBASHIGAWA,F.INAGAKI REVDAT 4 14-JUN-23 2KE4 1 REMARK REVDAT 3 26-FEB-20 2KE4 1 REMARK SEQADV REVDAT 2 06-OCT-09 2KE4 1 JRNL REVDAT 1 03-MAR-09 2KE4 0 JRNL AUTH Y.KOBASHIGAWA,H.KUMETA,D.KANOH,F.INAGAKI JRNL TITL THE NMR STRUCTURE OF THE TC10- AND CDC42-INTERACTING DOMAIN JRNL TITL 2 OF CIP4. JRNL REF J.BIOMOL.NMR V. 44 113 2009 JRNL REFN ISSN 0925-2738 JRNL PMID 19387844 JRNL DOI 10.1007/S10858-009-9317-Z REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, SPARKY 3.110 REMARK 3 AUTHORS : VARIAN (VNMR), GODDARD (SPARKY) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KE4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000101007. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM MES-1, 150 MM SODIUM REMARK 210 CHLORIDE-2, 1 MM DTT-3, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HN(CO)CA; 3D HNCA; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HN(CA)HA; 3D HBHA(CO)NH; 3D C(CO) REMARK 210 NH; 3D H(CCO)NH; 3D HCCH-TOCSY; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 2D (HB)CB(CGCD)HD; 2D (HB) REMARK 210 CB(CGCDCE)HE; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D HCCH-TOCSY REMARK 210 (AROMATIC); 2D 1H-13C HSQC REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.4, SPARKY 3.110, CYANA REMARK 210 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 333 -73.83 -109.25 REMARK 500 1 GLN A 348 -75.64 -38.67 REMARK 500 2 PHE A 335 30.78 37.50 REMARK 500 2 LEU A 401 -72.07 -65.15 REMARK 500 2 ALA A 415 -68.99 -104.93 REMARK 500 2 SER A 421 34.65 -92.12 REMARK 500 3 THR A 332 -168.16 -66.57 REMARK 500 3 GLU A 333 -76.35 -130.73 REMARK 500 3 LEU A 347 -72.23 -36.07 REMARK 500 3 LEU A 401 -69.73 -96.74 REMARK 500 3 ALA A 415 -65.36 -104.60 REMARK 500 3 VAL A 419 -73.68 -55.20 REMARK 500 3 SER A 421 -74.77 -39.51 REMARK 500 3 ASN A 422 98.35 -45.67 REMARK 500 4 PRO A 329 -86.90 -75.00 REMARK 500 4 HIS A 330 -77.16 -94.25 REMARK 500 4 MET A 331 146.51 -179.78 REMARK 500 4 PHE A 335 30.16 -93.46 REMARK 500 4 GLN A 349 -71.48 -41.81 REMARK 500 4 ILE A 391 -71.10 -66.08 REMARK 500 4 LEU A 401 -75.13 -96.77 REMARK 500 4 ALA A 415 -68.39 -105.14 REMARK 500 4 SER A 421 97.97 -167.70 REMARK 500 5 PRO A 329 -76.24 -75.03 REMARK 500 5 GLU A 333 -61.40 -100.65 REMARK 500 5 ALA A 415 -61.97 -104.77 REMARK 500 5 ARG A 423 40.15 37.47 REMARK 500 6 THR A 332 -174.44 -62.54 REMARK 500 6 GLU A 333 -151.12 -126.43 REMARK 500 6 ASP A 334 102.54 -53.88 REMARK 500 6 LEU A 347 -71.30 -52.13 REMARK 500 6 GLN A 349 -75.03 -57.36 REMARK 500 6 LEU A 401 -61.42 -96.65 REMARK 500 6 ALA A 415 -65.17 -104.88 REMARK 500 7 ASP A 334 65.84 75.58 REMARK 500 7 LEU A 401 -63.68 -96.80 REMARK 500 7 ALA A 415 -61.45 -104.87 REMARK 500 8 ASP A 334 118.41 -169.07 REMARK 500 8 PHE A 335 43.94 -86.26 REMARK 500 8 GLN A 359 -32.34 -38.79 REMARK 500 8 LEU A 401 -65.66 -96.80 REMARK 500 9 GLU A 333 -50.23 -121.19 REMARK 500 9 PHE A 335 47.51 38.77 REMARK 500 9 GLN A 349 -76.94 -61.70 REMARK 500 9 LEU A 401 -75.95 -96.78 REMARK 500 9 ALA A 415 -63.78 -104.84 REMARK 500 10 PRO A 329 -77.61 -75.02 REMARK 500 10 THR A 332 -148.64 -60.09 REMARK 500 10 ASP A 334 120.91 -36.31 REMARK 500 10 LEU A 347 -75.39 -58.61 REMARK 500 REMARK 500 THIS ENTRY HAS 113 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16129 RELATED DB: BMRB DBREF 2KE4 A 332 425 UNP Q15642 CIP4_HUMAN 388 481 SEQADV 2KE4 GLY A 328 UNP Q15642 EXPRESSION TAG SEQADV 2KE4 PRO A 329 UNP Q15642 EXPRESSION TAG SEQADV 2KE4 HIS A 330 UNP Q15642 EXPRESSION TAG SEQADV 2KE4 MET A 331 UNP Q15642 EXPRESSION TAG SEQRES 1 A 98 GLY PRO HIS MET THR GLU ASP PHE SER HIS LEU PRO PRO SEQRES 2 A 98 GLU GLN GLN ARG LYS ARG LEU GLN GLN GLN LEU GLU GLU SEQRES 3 A 98 ARG SER ARG GLU LEU GLN LYS GLU VAL ASP GLN ARG GLU SEQRES 4 A 98 ALA LEU LYS LYS MET LYS ASP VAL TYR GLU LYS THR PRO SEQRES 5 A 98 GLN MET GLY ASP PRO ALA SER LEU GLU PRO GLN ILE ALA SEQRES 6 A 98 GLU THR LEU SER ASN ILE GLU ARG LEU LYS LEU GLU VAL SEQRES 7 A 98 GLN LYS TYR GLU ALA TRP LEU ALA GLU ALA GLU SER ARG SEQRES 8 A 98 VAL LEU SER ASN ARG GLY ASP HELIX 1 1 PRO A 339 GLU A 366 1 28 HELIX 2 2 GLU A 366 THR A 378 1 13 HELIX 3 3 PRO A 379 GLY A 382 5 4 HELIX 4 4 ASP A 383 SER A 386 5 4 HELIX 5 5 LEU A 387 ASN A 422 1 36 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1