HEADER RNA BINDING PROTEIN 01-APR-09 2KHC TITLE BRUNO RRM3+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: TESTIS-SPECIFIC RNP-TYPE RNA BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 684-801; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: ARET, BRUNO, CG31762; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS RRM, RNA RECOGNITION MOTIF, BRUNO, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR A.M.LYON,B.S.REVEAL,P.M.MACDONALD,D.W.HOFFMAN REVDAT 3 16-MAR-22 2KHC 1 REMARK REVDAT 2 26-JAN-10 2KHC 1 JRNL REVDAT 1 22-DEC-09 2KHC 0 JRNL AUTH A.M.LYON,B.S.REVEAL,P.M.MACDONALD,D.W.HOFFMAN JRNL TITL BRUNO PROTEIN CONTAINS AN EXPANDED RNA RECOGNITION MOTIF. JRNL REF BIOCHEMISTRY V. 48 12202 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19919093 JRNL DOI 10.1021/BI900624J REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1. REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KHC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000101121. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 260 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 1,0 MM BRUNO RRM3+, 1 MM REMARK 210 POTASSIUM PHOSPHATE, 300-400 MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY; 3D 1H-15N REMARK 210 NOESY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-10 REMARK 470 RES CSSEQI ATOMS REMARK 470 LYS A 597 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB2 HIS A 526 HA LEU A 591 1.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 498 174.08 58.10 REMARK 500 1 SER A 499 85.93 58.94 REMARK 500 1 GLN A 513 164.45 -42.14 REMARK 500 1 PRO A 528 174.64 -45.46 REMARK 500 1 LEU A 541 -32.99 -35.83 REMARK 500 1 PRO A 542 -30.96 -37.96 REMARK 500 1 PHE A 543 58.59 -52.05 REMARK 500 1 ASN A 545 108.36 -41.17 REMARK 500 1 LYS A 555 -70.87 -51.67 REMARK 500 1 GLN A 556 -75.12 -106.06 REMARK 500 2 GLN A 513 165.60 -41.75 REMARK 500 2 PRO A 542 -38.64 -38.69 REMARK 500 2 PHE A 543 59.91 -52.97 REMARK 500 2 ASP A 554 87.08 -156.22 REMARK 500 2 LYS A 555 -71.57 -102.67 REMARK 500 2 GLN A 556 -67.23 -104.73 REMARK 500 2 LEU A 559 -152.86 -60.90 REMARK 500 2 SER A 560 83.49 -49.10 REMARK 500 2 CYS A 562 -167.98 -170.08 REMARK 500 2 PRO A 571 176.75 -43.83 REMARK 500 2 LYS A 589 115.11 -167.14 REMARK 500 3 LEU A 497 -173.58 -179.96 REMARK 500 3 ALA A 507 98.97 -65.99 REMARK 500 3 GLN A 513 -174.50 -42.74 REMARK 500 3 CYS A 520 33.81 -92.02 REMARK 500 3 HIS A 526 -39.15 -134.30 REMARK 500 3 LEU A 541 -35.32 -39.55 REMARK 500 3 SER A 558 -65.88 -94.80 REMARK 500 3 LYS A 589 115.67 -166.89 REMARK 500 4 ALA A 481 40.55 -97.72 REMARK 500 4 PRO A 496 179.14 -53.78 REMARK 500 4 SER A 499 103.26 60.33 REMARK 500 4 SER A 503 -50.07 -142.64 REMARK 500 4 ALA A 506 94.80 -58.91 REMARK 500 4 ALA A 510 -178.60 -49.03 REMARK 500 4 LYS A 512 -162.48 -57.74 REMARK 500 4 GLN A 513 156.46 -39.06 REMARK 500 4 ILE A 514 -174.76 -49.05 REMARK 500 4 HIS A 526 -36.91 -131.31 REMARK 500 4 GLN A 556 -74.71 -101.26 REMARK 500 4 THR A 557 -41.83 -136.88 REMARK 500 4 LEU A 559 -150.07 -92.92 REMARK 500 4 SER A 560 161.46 -25.82 REMARK 500 4 LYS A 561 -169.83 -55.86 REMARK 500 4 CYS A 562 -169.36 -160.98 REMARK 500 4 LYS A 589 111.26 -167.15 REMARK 500 5 GLN A 513 162.36 -41.29 REMARK 500 5 HIS A 526 -37.76 -130.04 REMARK 500 5 PRO A 528 173.79 -57.56 REMARK 500 5 LEU A 541 -31.89 -36.41 REMARK 500 REMARK 500 THIS ENTRY HAS 103 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2KHC A 480 597 UNP O18409 O18409_DROME 684 801 SEQRES 1 A 118 ALA ALA GLY LEU PRO GLN PHE GLY SER ALA SER ALA LEU SEQRES 2 A 118 SER THR SER PRO LEU ALA SER VAL ALA LEU SER ALA ALA SEQRES 3 A 118 ALA ALA ALA ALA ALA GLY LYS GLN ILE GLU GLY PRO GLU SEQRES 4 A 118 GLY CYS ASN LEU PHE ILE TYR HIS LEU PRO GLN GLU PHE SEQRES 5 A 118 THR ASP THR ASP LEU ALA SER THR PHE LEU PRO PHE GLY SEQRES 6 A 118 ASN VAL ILE SER ALA LYS VAL PHE ILE ASP LYS GLN THR SEQRES 7 A 118 SER LEU SER LYS CYS PHE GLY PHE VAL SER PHE ASP ASN SEQRES 8 A 118 PRO ASP SER ALA GLN VAL ALA ILE LYS ALA MET ASN GLY SEQRES 9 A 118 PHE GLN VAL GLY THR LYS ARG LEU LYS VAL GLN LEU LYS SEQRES 10 A 118 LYS HELIX 1 1 THR A 532 PHE A 540 1 9 HELIX 2 2 PRO A 571 MET A 581 1 11 SHEET 1 A 4 ASN A 545 VAL A 551 0 SHEET 2 A 4 PHE A 563 ASP A 569 -1 O ASP A 569 N ASN A 545 SHEET 3 A 4 CYS A 520 TYR A 525 -1 N LEU A 522 O VAL A 566 SHEET 4 A 4 VAL A 593 LYS A 596 -1 O GLN A 594 N PHE A 523 SHEET 1 B 2 GLN A 585 VAL A 586 0 SHEET 2 B 2 LYS A 589 ARG A 590 -1 O LYS A 589 N VAL A 586 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1