data_2KJ8 # _entry.id 2KJ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KJ8 pdb_00002kj8 10.2210/pdb2kj8/pdb RCSB RCSB101187 ? ? WWPDB D_1000101187 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ER652A _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KJ8 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-25 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cort, J.R.' 1 'Ramelot, T.A.' 2 'Wang, D.' 3 'Ciccosanti, C.' 4 'Janjua, H.' 5 'Nair, R.' 6 'Rost, B.' 7 'Swapna, G.' 8 'Xiao, R.' 9 'Everett, J.K.' 10 'Montelione, G.T.' 11 'Kennedy, M.A.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title 'NMR structure of fragment 87-196 from the putative phage integrase IntS of E. coli' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cort, J.R.' 1 ? primary 'Montelione, G.T.' 2 ? primary 'Kennedy, M.A.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Putative prophage CPS-53 integrase' _entity.formula_weight 13853.734 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 87-196' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGE VFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGE VFRYAIVTGRAKYNPAPDLADAMKGYRKKNLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ER652A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 ASN n 1 4 ASN n 1 5 ASN n 1 6 SER n 1 7 PHE n 1 8 SER n 1 9 ALA n 1 10 ILE n 1 11 TYR n 1 12 LYS n 1 13 GLU n 1 14 TRP n 1 15 TYR n 1 16 GLU n 1 17 HIS n 1 18 LYS n 1 19 LYS n 1 20 GLN n 1 21 VAL n 1 22 TRP n 1 23 SER n 1 24 VAL n 1 25 GLY n 1 26 TYR n 1 27 ALA n 1 28 THR n 1 29 GLU n 1 30 LEU n 1 31 ALA n 1 32 LYS n 1 33 MET n 1 34 PHE n 1 35 ASP n 1 36 ASP n 1 37 ASP n 1 38 ILE n 1 39 LEU n 1 40 PRO n 1 41 ILE n 1 42 ILE n 1 43 GLY n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 ILE n 1 48 GLN n 1 49 ASP n 1 50 ILE n 1 51 GLU n 1 52 PRO n 1 53 MET n 1 54 GLN n 1 55 LEU n 1 56 LEU n 1 57 GLU n 1 58 VAL n 1 59 ILE n 1 60 ARG n 1 61 ARG n 1 62 PHE n 1 63 GLU n 1 64 ASP n 1 65 ARG n 1 66 GLY n 1 67 ALA n 1 68 MET n 1 69 GLU n 1 70 ARG n 1 71 ALA n 1 72 ASN n 1 73 LYS n 1 74 ALA n 1 75 ARG n 1 76 ARG n 1 77 ARG n 1 78 CYS n 1 79 GLY n 1 80 GLU n 1 81 VAL n 1 82 PHE n 1 83 ARG n 1 84 TYR n 1 85 ALA n 1 86 ILE n 1 87 VAL n 1 88 THR n 1 89 GLY n 1 90 ARG n 1 91 ALA n 1 92 LYS n 1 93 TYR n 1 94 ASN n 1 95 PRO n 1 96 ALA n 1 97 PRO n 1 98 ASP n 1 99 LEU n 1 100 ALA n 1 101 ASP n 1 102 ALA n 1 103 MET n 1 104 LYS n 1 105 GLY n 1 106 TYR n 1 107 ARG n 1 108 LYS n 1 109 LYS n 1 110 ASN n 1 111 LEU n 1 112 GLU n 1 113 HIS n 1 114 HIS n 1 115 HIS n 1 116 HIS n 1 117 HIS n 1 118 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b2349, intC, intS, JW2345, yfdB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET21-23C _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code INTS_ECOLI _struct_ref.pdbx_db_accession P37326 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGE VFRYAIVTGRAKYNPAPDLADAMKGYRKKN ; _struct_ref.pdbx_align_begin 87 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KJ8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37326 _struct_ref_seq.db_align_beg 87 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KJ8 LEU A 111 ? UNP P37326 ? ? 'expression tag' 111 1 1 2KJ8 GLU A 112 ? UNP P37326 ? ? 'expression tag' 112 2 1 2KJ8 HIS A 113 ? UNP P37326 ? ? 'expression tag' 113 3 1 2KJ8 HIS A 114 ? UNP P37326 ? ? 'expression tag' 114 4 1 2KJ8 HIS A 115 ? UNP P37326 ? ? 'expression tag' 115 5 1 2KJ8 HIS A 116 ? UNP P37326 ? ? 'expression tag' 116 6 1 2KJ8 HIS A 117 ? UNP P37326 ? ? 'expression tag' 117 7 1 2KJ8 HIS A 118 ? UNP P37326 ? ? 'expression tag' 118 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D 1H-15N NOESY' 1 2 1 '3D 1H-13C NOESY' 1 3 1 '3D HCCH-COSY' 1 4 1 '3D HNCO' 1 5 1 '3D HNCA' 1 6 1 '3D HNCACB' 1 7 1 '3D HBHA(CO)NH' 1 8 1 '3D CBCA(CO)NH' 1 9 1 '3D C(CO)NH' 1 10 1 '3D HNHA' 1 11 1 '2D 1H-15N HSQC' 1 12 1 '2D 1H-13C HSQC' 1 13 2 '4D 1H-13C-13C-1H HMQC-NOESY-HMQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 215 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;95 % H2O, 5 % [U-2H] D2O, 20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 w/v sodium azide, 0.95 mM [biosynthetically directed 5%C; U-99% 15N] protein, 95% H2O/5% D2O ; 1 '95% H2O/5% D2O' ;100 % [U-2H] D2O, 20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 w/v sodium azide, 1.2 mM [U-99% 13C; U-99% 15N] protein, 100% D2O ; 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 750 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2KJ8 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'final refinement with LJ and electrostatic potential conducted in explicit water' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'low restraint violations and energies' _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KJ8 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KJ8 _pdbx_nmr_representative.selection_criteria 'no criteria' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Goddard 'chemical shift assignment' Sparky ? 1 Goddard 'data analysis' Sparky ? 2 'Huang, Tejero, Powers and Montelione' 'structure solution' AutoStructure ? 3 'Accelrys Software Inc.' processing Felix ? 4 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 5 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'The construct comprises resiudes 87-196 of the 385-residue full length protein' _exptl.entry_id 2KJ8 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KJ8 _struct.title ;NMR structure of fragment 87-196 from the putative phage integrase IntS of E. coli: Northeast Structural Genomics Consortium target ER652A, PSI-2 ; _struct.pdbx_model_details 'no criteria, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KJ8 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text ;integrase, intS, intC, yfdB, CPS-53, DNA integration, DNA recombination, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Unknown Function, DNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 19 ? SER A 6 LYS A 19 1 ? 14 HELX_P HELX_P2 2 SER A 23 ? GLY A 43 ? SER A 23 GLY A 43 1 ? 21 HELX_P HELX_P3 3 GLU A 51 ? ASP A 64 ? GLU A 51 ASP A 64 1 ? 14 HELX_P HELX_P4 4 ALA A 67 ? THR A 88 ? ALA A 67 THR A 88 1 ? 22 HELX_P HELX_P5 5 PRO A 95 ? TYR A 106 ? PRO A 95 TYR A 106 1 ? 12 HELX_P HELX_P6 6 ARG A 107 ? LYS A 109 ? ARG A 107 LYS A 109 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2KJ8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 TRP 14 14 14 TRP TRP A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 MET 103 103 103 MET MET A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 HIS 113 113 113 HIS HIS A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 HIS 118 118 118 HIS HIS A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id H2O-1 95 ? % ? 1 D2O-2 5 ? % '[U-2H]' 1 MES-3 20 ? mM ? 1 'sodium chloride-4' 200 ? mM ? 1 'calcium chloride-5' 5 ? mM ? 1 DTT-6 10 ? mM ? 1 'sodium azide-7' 0.02 ? w/v ? 1 protein-8 0.95 ? mM '[biosynthetically directed 5%C; U-99% 15N]' 1 D2O-9 100 ? % '[U-2H]' 2 MES-10 20 ? mM ? 2 'sodium chloride-11' 200 ? mM ? 2 'calcium chloride-12' 5 ? mM ? 2 DTT-13 10 ? mM ? 2 'sodium azide-14' 0.02 ? w/v ? 2 protein-15 1.2 ? mM '[U-99% 13C; U-99% 15N]' 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD2 A PHE 34 ? ? HH21 A ARG 77 ? ? 1.26 2 4 OE1 A GLU 16 ? ? HZ3 A LYS 19 ? ? 1.56 3 6 H2 A SER 1 ? ? OE1 A GLU 13 ? ? 1.56 4 7 HE1 A PHE 7 ? ? HZ A PHE 34 ? ? 1.31 5 8 HZ3 A LYS 32 ? ? OD1 A ASP 36 ? ? 1.58 6 8 HZ1 A LYS 18 ? ? OE2 A GLU 80 ? ? 1.58 7 8 OE1 A GLU 57 ? ? HE2 A HIS 117 ? ? 1.59 8 9 HH21 A ARG 77 ? ? OE2 A GLU 80 ? ? 1.59 9 10 HD12 A LEU 111 ? ? HD1 A HIS 117 ? ? 1.28 10 11 OE2 A GLU 13 ? ? HH22 A ARG 90 ? ? 1.59 11 12 OD1 A ASP 37 ? ? HH22 A ARG 65 ? ? 1.57 12 12 OE2 A GLU 69 ? ? HZ2 A LYS 73 ? ? 1.58 13 13 OD1 A ASP 37 ? ? HH22 A ARG 65 ? ? 1.55 14 14 OD1 A ASP 37 ? ? HH21 A ARG 65 ? ? 1.60 15 15 HE1 A PHE 7 ? ? HZ A PHE 34 ? ? 1.30 16 15 HZ1 A LYS 18 ? ? OE2 A GLU 80 ? ? 1.56 17 16 OD1 A ASP 37 ? ? HH12 A ARG 65 ? ? 1.57 18 16 OE1 A GLU 63 ? ? HH21 A ARG 107 ? ? 1.60 19 17 HB2 A GLU 51 ? ? HB2 A GLN 54 ? ? 1.29 20 17 OE1 A GLU 13 ? ? HH12 A ARG 90 ? ? 1.57 21 17 HZ1 A LYS 12 ? ? OE1 A GLU 16 ? ? 1.58 22 18 OD1 A ASP 64 ? ? HD1 A HIS 116 ? ? 1.57 23 19 HH21 A ARG 77 ? ? OE2 A GLU 80 ? ? 1.54 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 41 ? ? -98.75 -60.49 2 1 PRO A 95 ? ? -75.60 32.73 3 2 PRO A 95 ? ? -76.52 34.09 4 2 HIS A 116 ? ? -165.35 0.54 5 3 ILE A 41 ? ? -98.99 -67.75 6 3 LYS A 92 ? ? -136.23 -64.84 7 3 PRO A 95 ? ? -77.78 28.53 8 3 LYS A 109 ? ? 58.80 82.18 9 4 ILE A 41 ? ? -100.25 -60.75 10 4 LYS A 92 ? ? -136.17 -45.62 11 4 PRO A 95 ? ? -74.92 36.63 12 4 LYS A 109 ? ? 54.97 70.49 13 4 LEU A 111 ? ? 69.79 -68.91 14 4 HIS A 115 ? ? -106.98 70.20 15 5 LYS A 92 ? ? -109.54 -64.80 16 5 PRO A 95 ? ? -73.89 29.08 17 6 ILE A 41 ? ? -91.07 -61.33 18 6 PRO A 95 ? ? -75.88 32.99 19 6 LYS A 109 ? ? 64.86 77.99 20 7 HIS A 114 ? ? 64.38 66.22 21 8 ASN A 3 ? ? 63.73 89.84 22 8 ILE A 41 ? ? -97.36 -66.49 23 8 PRO A 95 ? ? -76.62 33.47 24 8 TYR A 106 ? ? -50.07 -72.21 25 8 GLU A 112 ? ? 64.57 -91.05 26 9 ASP A 35 ? ? -58.22 -72.56 27 9 ILE A 41 ? ? -95.07 -65.14 28 9 PRO A 95 ? ? -75.94 26.36 29 9 HIS A 115 ? ? -103.85 -74.11 30 9 HIS A 116 ? ? -174.40 -57.00 31 10 LYS A 109 ? ? 73.52 -48.77 32 10 HIS A 116 ? ? 62.58 83.47 33 11 ASN A 3 ? ? 61.12 85.70 34 11 PRO A 40 ? ? -68.44 4.36 35 12 ASN A 4 ? ? 70.17 92.13 36 12 ILE A 41 ? ? -90.71 -67.25 37 12 ARG A 90 ? ? -91.70 -64.45 38 12 PRO A 95 ? ? -76.08 29.36 39 12 LYS A 108 ? ? 58.05 84.54 40 13 SER A 2 ? ? -96.67 -149.04 41 13 ASN A 3 ? ? -69.52 90.98 42 15 ASN A 3 ? ? 65.92 84.57 43 15 PRO A 95 ? ? -75.00 39.62 44 15 HIS A 116 ? ? 69.91 -73.41 45 15 HIS A 117 ? ? -125.92 -162.09 46 16 PRO A 95 ? ? -70.80 43.80 47 17 PRO A 95 ? ? -69.11 26.59 48 18 ILE A 41 ? ? -97.13 -64.67 49 18 PRO A 95 ? ? -76.70 34.28 50 18 HIS A 117 ? ? -103.91 -74.75 51 19 PRO A 95 ? ? -76.99 36.90 52 19 HIS A 116 ? ? -98.55 -68.28 53 19 HIS A 117 ? ? 171.87 -30.38 54 20 ILE A 41 ? ? -102.34 -63.03 55 20 PRO A 95 ? ? -71.90 36.02 #