data_2KJR # _entry.id 2KJR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KJR pdb_00002kjr 10.2210/pdb2kjr/pdb RCSB RCSB101206 ? ? WWPDB D_1000101206 ? ? BMRB 16338 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details TargetDB FR629A unspecified . BMRB 16338 unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KJR _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-06-08 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ramelot, T.A.' 1 'Cort, J.R.' 2 'Shastry, R.' 3 'Ciccosanti, C.' 4 'Jiang, M.' 5 'Nair, R.' 6 'Rost, B.' 7 'Swapna, G.' 8 'Acton, T.B.' 9 'Xiao, R.' 10 'Everett, J.K.' 11 'Montelione, G.T.' 12 'Kennedy, M.A.' 13 'Northeast Structural Genomics Consortium (NESG)' 14 # _citation.id primary _citation.title ;Solution NMR structure of the N-terminal Ubiquitin-like Domain from Tubulin-binding Cofactor B, CG11242, from Drosophila melanogaster. Northeast Structural Genomics Consortium Target FR629A (residues 8-92) ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramelot, T.A.' 1 ? primary 'Cort, J.R.' 2 ? primary 'Shastry, R.' 3 ? primary 'Ciccosanti, C.' 4 ? primary 'Jiang, M.' 5 ? primary 'Nair, R.' 6 ? primary 'Rost, B.' 7 ? primary 'Swapna, G.' 8 ? primary 'Acton, T.B.' 9 ? primary 'Xiao, R.' 10 ? primary 'Everett, J.K.' 11 ? primary 'Montelione, G.T.' 12 ? primary 'Kennedy, M.A.' 13 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description CG11242 _entity.formula_weight 10360.654 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ubl domain, residues 8-92' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGHHHHHHSHGKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKGDTCVSTMDNNDAQLG YYANSDGLRLHVVDS ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHSHGKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKGDTCVSTMDNNDAQLG YYANSDGLRLHVVDS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier FR629A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 HIS n 1 11 GLY n 1 12 LYS n 1 13 SER n 1 14 ASP n 1 15 PHE n 1 16 ILE n 1 17 LYS n 1 18 VAL n 1 19 ASN n 1 20 VAL n 1 21 SER n 1 22 ASN n 1 23 SER n 1 24 HIS n 1 25 ASN n 1 26 ASP n 1 27 ALA n 1 28 VAL n 1 29 ALA n 1 30 PHE n 1 31 GLU n 1 32 VAL n 1 33 LYS n 1 34 LEU n 1 35 ALA n 1 36 LYS n 1 37 ASP n 1 38 LEU n 1 39 THR n 1 40 VAL n 1 41 ALA n 1 42 GLN n 1 43 LEU n 1 44 LYS n 1 45 THR n 1 46 LYS n 1 47 LEU n 1 48 GLU n 1 49 ILE n 1 50 LEU n 1 51 THR n 1 52 GLY n 1 53 GLY n 1 54 CYS n 1 55 ALA n 1 56 GLY n 1 57 THR n 1 58 MET n 1 59 LYS n 1 60 VAL n 1 61 GLN n 1 62 VAL n 1 63 PHE n 1 64 LYS n 1 65 GLY n 1 66 ASP n 1 67 THR n 1 68 CYS n 1 69 VAL n 1 70 SER n 1 71 THR n 1 72 MET n 1 73 ASP n 1 74 ASN n 1 75 ASN n 1 76 ASP n 1 77 ALA n 1 78 GLN n 1 79 LEU n 1 80 GLY n 1 81 TYR n 1 82 TYR n 1 83 ALA n 1 84 ASN n 1 85 SER n 1 86 ASP n 1 87 GLY n 1 88 LEU n 1 89 ARG n 1 90 LEU n 1 91 HIS n 1 92 VAL n 1 93 VAL n 1 94 ASP n 1 95 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CG11242, Dmel_CG11242' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) pMGK' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET14-15C _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1ZBM2_DROME _struct_ref.pdbx_db_accession A1ZBM2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKGDTCVSTMDNNDAQLGYYANSDGLRL HVVDS ; _struct_ref.pdbx_align_begin 8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KJR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 11 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 95 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A1ZBM2 _struct_ref_seq.db_align_beg 8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 92 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 11 _struct_ref_seq.pdbx_auth_seq_align_end 95 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KJR MET A 1 ? UNP A1ZBM2 ? ? 'expression tag' 1 1 1 2KJR GLY A 2 ? UNP A1ZBM2 ? ? 'expression tag' 2 2 1 2KJR HIS A 3 ? UNP A1ZBM2 ? ? 'expression tag' 3 3 1 2KJR HIS A 4 ? UNP A1ZBM2 ? ? 'expression tag' 4 4 1 2KJR HIS A 5 ? UNP A1ZBM2 ? ? 'expression tag' 5 5 1 2KJR HIS A 6 ? UNP A1ZBM2 ? ? 'expression tag' 6 6 1 2KJR HIS A 7 ? UNP A1ZBM2 ? ? 'expression tag' 7 7 1 2KJR HIS A 8 ? UNP A1ZBM2 ? ? 'expression tag' 8 8 1 2KJR SER A 9 ? UNP A1ZBM2 ? ? 'expression tag' 9 9 1 2KJR HIS A 10 ? UNP A1ZBM2 ? ? 'expression tag' 10 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D 1H-15N NOESY' 1 4 1 '3D 1H-13C NOESY' 1 5 1 '3D HNCO' 1 6 1 '3D HNCA' 1 7 1 '3D CBCA(CO)NH' 1 8 1 '3D HNCACB' 1 9 1 '3D C(CO)NH' 1 10 1 '3D HBHA(CO)NH' 1 11 1 '3D HCCH-TOCSY' 1 12 1 '3D HCCH-TOCSY' 1 13 2 '2D 1H-13C HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 273 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '50 mM MES, 50 mM arginine, 10 mM DTT, 0.02 % sodium azide, 1.1 mM [U-100% 13C; U-100% 15N] protein, 50 uM DSS, 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '50 mM MES, 50 mM arginine, 10 mM DTT, 0.02 % sodium azide, 1.0 mM [U-5% 13C; U-100% 15N] protein, 50 uM DSS, 95% H2O/5% D2O' 2 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian INOVA 1 'Varian INOVA' 850 Bruker 'AVANCE III' 2 'Bruker AvanceIII' # _pdbx_nmr_refine.entry_id 2KJR _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'NIH-Xplor-2.20 refinement with hydrogen bond PMF, radius of gyration, rama, IVM module.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 125 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KJR _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KJR _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2008 1 Varian collection VNMR 6.1C 2 'Bruker Biospin' collection TopSpin 2.1.3 3 'Huang, Tejero, Powers and Montelione' 'data analysis' AutoStructure 2.2.1 4 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' 2.20 5 Goddard 'data analysis' Sparky 3.113 6 'Bhattacharya and Montelione' 'structure validation' PSVS 1.3 7 'Zimmerman, Moseley, Kulikowski and Montelione' 'chemical shift assignment' AutoAssign 2.3.0 8 '(PDBStat) R. Tejero, G.T. Montelione' 'data analysis' PdbStat 5.1 9 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 2.20 10 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KJR _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KJR _struct.title ;Solution NMR structure of the N-terminal Ubiquitin-like Domain from Tubulin-binding Cofactor B, CG11242, from Drosophila melanogaster. Northeast Structural Genomics Consortium Target FR629A (residues 8-92) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KJR _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text ;ubl, ubiquitin, ubiquitin-like, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, SIGNALING PROTEIN, CHAPERONE ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 39 ? GLY A 52 ? THR A 39 GLY A 52 1 ? 14 HELX_P HELX_P2 2 GLN A 78 ? ALA A 83 ? GLN A 78 ALA A 83 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 28 ? ALA A 35 ? VAL A 28 ALA A 35 A 2 PHE A 15 ? ASN A 22 ? PHE A 15 ASN A 22 A 3 ARG A 89 ? ASP A 94 ? ARG A 89 ASP A 94 A 4 MET A 58 ? LYS A 64 ? MET A 58 LYS A 64 A 5 THR A 67 ? THR A 71 ? THR A 67 THR A 71 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 29 ? O ALA A 29 N VAL A 20 ? N VAL A 20 A 2 3 N ASN A 19 ? N ASN A 19 O LEU A 90 ? O LEU A 90 A 3 4 O ARG A 89 ? O ARG A 89 N PHE A 63 ? N PHE A 63 A 4 5 N VAL A 62 ? N VAL A 62 O SER A 70 ? O SER A 70 # _atom_sites.entry_id 2KJR _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 SER 95 95 95 SER SER A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-26 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Database references' 7 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' pdbx_struct_assembly 6 3 'Structure model' pdbx_struct_oper_list 7 3 'Structure model' struct_ref_seq_dif 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id MES 50 mM ? 1 arginine 50 mM ? 1 DTT 10 mM ? 1 'sodium azide' 0.02 % ? 1 protein 1.1 mM '[U-100% 13C; U-100% 15N]' 1 DSS 50 uM ? 1 MES 50 mM ? 2 arginine 50 mM ? 2 DTT 10 mM ? 2 'sodium azide' 0.02 % ? 2 protein 1.0 mM '[U-5% 13C; U-100% 15N]' 2 DSS 50 uM ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 HG A SER 21 ? ? HD1 A HIS 91 ? ? 1.33 2 20 HD21 A ASN 22 ? ? HD22 A ASN 25 ? ? 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 13 ? ? -151.94 37.73 2 1 SER A 23 ? ? -79.87 -74.91 3 1 ASN A 25 ? ? -172.16 140.22 4 1 MET A 72 ? ? -65.20 90.01 5 1 ALA A 83 ? ? -102.21 63.94 6 2 HIS A 4 ? ? 57.94 2.71 7 2 HIS A 7 ? ? -57.48 -78.42 8 2 SER A 9 ? ? -159.23 5.61 9 2 HIS A 24 ? ? 39.95 49.60 10 2 ASN A 25 ? ? -151.93 -29.32 11 2 ASP A 26 ? ? 60.24 -1.37 12 2 GLU A 31 ? ? 37.03 77.56 13 2 SER A 70 ? ? 164.70 -179.28 14 2 MET A 72 ? ? -66.17 93.72 15 2 ALA A 83 ? ? -88.50 -106.65 16 3 HIS A 3 ? ? -86.64 43.99 17 3 ASN A 25 ? ? 56.55 3.90 18 3 ASP A 26 ? ? 45.77 29.01 19 3 MET A 72 ? ? -68.85 92.22 20 3 ALA A 83 ? ? -103.77 67.65 21 3 ASN A 84 ? ? -100.71 53.47 22 3 SER A 85 ? ? -161.46 -131.77 23 4 HIS A 6 ? ? 54.82 -91.22 24 4 HIS A 7 ? ? 41.84 -90.18 25 4 SER A 13 ? ? 72.13 81.76 26 4 ASN A 25 ? ? 58.64 151.25 27 4 GLU A 31 ? ? 35.02 66.72 28 4 THR A 57 ? ? -133.85 -49.38 29 4 SER A 70 ? ? 167.52 174.40 30 4 MET A 72 ? ? -62.29 73.72 31 4 ALA A 83 ? ? -104.22 75.65 32 5 SER A 9 ? ? -156.44 -58.43 33 5 HIS A 10 ? ? 42.18 -109.85 34 5 SER A 13 ? ? 38.72 89.40 35 5 ASP A 14 ? ? -141.05 28.47 36 5 HIS A 24 ? ? -79.50 -79.42 37 5 SER A 70 ? ? 168.44 176.50 38 5 MET A 72 ? ? -66.21 92.29 39 5 ALA A 83 ? ? -104.25 68.00 40 6 HIS A 10 ? ? 52.45 7.93 41 6 MET A 72 ? ? -64.70 85.50 42 6 ASN A 84 ? ? -169.57 26.86 43 7 HIS A 7 ? ? 37.81 86.39 44 7 LYS A 12 ? ? 43.04 -167.66 45 7 SER A 13 ? ? 43.56 20.06 46 7 ASP A 14 ? ? -79.17 44.31 47 7 HIS A 24 ? ? 54.46 15.27 48 7 THR A 57 ? ? -152.09 9.61 49 7 SER A 70 ? ? 166.03 175.92 50 7 MET A 72 ? ? -64.60 84.49 51 7 ALA A 83 ? ? -103.58 71.66 52 8 HIS A 3 ? ? 58.75 -74.96 53 8 ASN A 25 ? ? 70.25 149.41 54 8 THR A 57 ? ? -132.61 -56.47 55 8 SER A 70 ? ? 164.77 -175.90 56 8 MET A 72 ? ? -67.72 87.19 57 8 ASN A 84 ? ? -166.45 27.08 58 9 HIS A 5 ? ? -155.81 -0.79 59 9 HIS A 8 ? ? 43.21 -116.10 60 9 LYS A 12 ? ? 38.06 -96.36 61 9 HIS A 24 ? ? 68.06 -38.18 62 9 ASP A 26 ? ? 42.73 20.70 63 9 GLU A 31 ? ? 35.47 62.98 64 9 MET A 72 ? ? -67.70 90.11 65 10 HIS A 5 ? ? 54.45 105.81 66 10 ASP A 14 ? ? -103.17 69.05 67 10 ASN A 25 ? ? 60.57 145.18 68 10 GLU A 31 ? ? 33.52 45.11 69 10 THR A 57 ? ? -146.46 17.85 70 10 SER A 70 ? ? 166.75 177.02 71 10 MET A 72 ? ? -65.64 84.39 72 11 HIS A 4 ? ? -134.30 -37.45 73 11 HIS A 5 ? ? 46.62 90.12 74 11 HIS A 8 ? ? -154.11 -3.66 75 11 ASN A 25 ? ? 50.92 -121.38 76 11 ASP A 26 ? ? 57.32 -68.99 77 11 SER A 70 ? ? 171.40 179.16 78 11 MET A 72 ? ? -63.81 84.98 79 11 ALA A 83 ? ? -105.43 77.65 80 12 HIS A 6 ? ? 57.87 95.43 81 12 HIS A 8 ? ? 49.16 -111.24 82 12 SER A 13 ? ? -145.19 -61.17 83 12 ASN A 25 ? ? 59.08 143.20 84 12 ALA A 27 ? ? -56.84 109.23 85 12 CYS A 54 ? ? 64.96 109.46 86 12 SER A 70 ? ? 172.61 170.31 87 12 MET A 72 ? ? -63.19 83.25 88 12 ALA A 83 ? ? -100.80 64.40 89 13 HIS A 6 ? ? 68.09 -37.55 90 13 HIS A 10 ? ? 59.21 84.56 91 13 LYS A 12 ? ? 57.24 101.93 92 13 SER A 13 ? ? -159.95 86.90 93 13 ASP A 14 ? ? -101.93 51.99 94 13 ASN A 25 ? ? -175.22 -24.03 95 13 ASP A 26 ? ? 62.75 -0.56 96 13 MET A 72 ? ? -68.75 65.12 97 13 ALA A 83 ? ? -104.34 70.55 98 14 HIS A 5 ? ? 57.45 6.06 99 14 SER A 9 ? ? -167.38 85.54 100 14 LYS A 12 ? ? -65.53 -81.01 101 14 ASP A 14 ? ? -171.46 44.48 102 14 ASN A 25 ? ? 61.23 141.87 103 14 GLU A 31 ? ? 36.70 73.36 104 15 HIS A 3 ? ? 58.66 125.54 105 15 HIS A 5 ? ? -160.17 89.85 106 15 HIS A 8 ? ? 41.70 80.91 107 15 HIS A 10 ? ? 51.42 9.35 108 15 SER A 13 ? ? -166.30 -118.65 109 15 HIS A 24 ? ? 58.93 172.80 110 15 ASN A 25 ? ? 57.95 147.18 111 15 VAL A 69 ? ? -98.20 -61.97 112 15 MET A 72 ? ? -64.08 82.57 113 15 ALA A 83 ? ? -105.32 68.46 114 16 HIS A 3 ? ? 40.94 -91.31 115 16 SER A 9 ? ? 74.31 -53.57 116 16 SER A 23 ? ? -84.61 -75.02 117 16 GLU A 31 ? ? 38.69 61.36 118 16 SER A 70 ? ? 163.90 171.85 119 16 ASP A 73 ? ? -140.12 -27.95 120 16 ALA A 83 ? ? -106.63 72.90 121 17 SER A 13 ? ? 53.01 102.59 122 17 HIS A 24 ? ? 57.91 -70.79 123 17 MET A 72 ? ? -62.70 69.81 124 18 HIS A 5 ? ? 41.56 -134.42 125 18 HIS A 10 ? ? 51.87 9.46 126 18 SER A 23 ? ? -88.74 -76.72 127 18 MET A 72 ? ? -63.84 83.96 128 18 ASN A 84 ? ? -155.28 22.60 129 19 HIS A 7 ? ? 44.70 80.67 130 19 HIS A 8 ? ? 48.34 -172.62 131 19 SER A 9 ? ? -150.62 50.34 132 19 HIS A 24 ? ? 65.64 -65.37 133 19 SER A 70 ? ? 164.20 171.61 134 19 ALA A 83 ? ? -105.61 74.51 135 20 HIS A 6 ? ? -149.17 26.07 136 20 HIS A 8 ? ? 41.53 92.61 137 20 HIS A 10 ? ? 55.13 99.93 138 20 HIS A 24 ? ? -74.87 -98.31 139 20 ASP A 37 ? ? -61.33 1.22 140 20 SER A 85 ? ? -172.69 -129.78 141 20 ASP A 86 ? ? -172.74 142.66 #