HEADER    TRANSCRIPTION REGULATOR                 20-JUL-09   2KM4              
TITLE     SOLUTION STRUCTURE OF RTT103 CTD INTERACTING DOMAIN                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: REGULATOR OF TY1 TRANSPOSITION PROTEIN 103;                
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 1-131;                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;                       
SOURCE   3 ORGANISM_COMMON: YEAST;                                              
SOURCE   4 ORGANISM_TAXID: 4932;                                                
SOURCE   5 GENE: RTT103, YDR289C;                                               
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3)RIL;                             
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28B                                    
KEYWDS    CTD-INTERACTING DOMAIN, RNA POLYMERASE II BINDING PROTEIN,            
KEYWDS   2 PHOSPHOPROTEIN, TRANSCRIPTION TERMINATION, DNA-BINDING, NUCLEUS,     
KEYWDS   3 TRANSCRIPTION, TRANSCRIPTION REGULATION, TRANSCRIPTION REGULATOR     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    B.M.LUNDE,S.REICHOW,M.KIM,T.C.LEEPER,R.BECKER,S.BURATOWSKI,           
AUTHOR   2 A.MEINHART,G.VARANI                                                  
REVDAT   3   01-MAY-24 2KM4    1       SEQADV                                   
REVDAT   2   20-OCT-10 2KM4    1       JRNL                                     
REVDAT   1   08-SEP-10 2KM4    0                                                
JRNL        AUTH   B.M.LUNDE,S.L.REICHOW,M.KIM,H.SUH,T.C.LEEPER,F.YANG,         
JRNL        AUTH 2 H.MUTSCHLER,S.BURATOWSKI,A.MEINHART,G.VARANI                 
JRNL        TITL   COOPERATIVE INTERACTION OF TRANSCRIPTION TERMINATION FACTORS 
JRNL        TITL 2 WITH THE RNA POLYMERASE II C-TERMINAL DOMAIN.                
JRNL        REF    NAT.STRUCT.MOL.BIOL.          V.  17  1195 2010              
JRNL        REFN                   ISSN 1545-9993                               
JRNL        PMID   20818393                                                     
JRNL        DOI    10.1038/NSMB.1893                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 2.1                                            
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH                    
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2KM4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000101291.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 6.8                                
REMARK 210  IONIC STRENGTH                 : 100                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.5-1 MM [U-99% 13C; U-99% 15N]    
REMARK 210                                   RTT103-1, 100 MM POTASSIUM         
REMARK 210                                   CHLORIDE-2, 35 MM POTASSIUM        
REMARK 210                                   PHOSPHATE-3, 95% H2O/5% D2O; 0.5-  
REMARK 210                                   1 MM RTT103-4, 100 MM POTASSIUM    
REMARK 210                                   CHLORIDE-5, 35 MM POTASSIUM        
REMARK 210                                   PHOSPHATE-6, 100 % D2O-7, 100%     
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 3D 1H-15N NOESY;   
REMARK 210                                   3D 1H-13C NOESY; 3D HNCO; 3D       
REMARK 210                                   CBCA(CO)NH; 2D 1H-13C HSQC; 2D     
REMARK 210                                   1H-1H NOESY; 3D HNCACB; 3D HCCH-   
REMARK 210                                   TOCSY; 2D 1H-1H TOCSY              
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 750 MHZ; 600 MHZ; 800     
REMARK 210                                   MHZ                                
REMARK 210  SPECTROMETER MODEL             : DMX; INOVA                         
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER; VARIAN                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     HIS A   139                                                      
REMARK 465     HIS A   140                                                      
REMARK 465     HIS A   141                                                      
REMARK 465     HIS A   142                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A   4       92.40    -65.71                                   
REMARK 500  1 ASP A  35       41.73    -96.27                                   
REMARK 500  1 LEU A  48       30.99    -96.96                                   
REMARK 500  2 ASP A  35       44.84   -107.47                                   
REMARK 500  2 LEU A  48       32.37    -94.84                                   
REMARK 500  2 PRO A  99     -177.19    -69.77                                   
REMARK 500  3 SER A   4      103.50    -51.80                                   
REMARK 500  3 ASP A  35       51.65   -116.15                                   
REMARK 500  3 LEU A  48       31.24    -94.45                                   
REMARK 500  4 ASP A  35       44.88    -93.79                                   
REMARK 500  4 LEU A  48       32.01    -95.40                                   
REMARK 500  5 ASP A  35       48.19    -99.21                                   
REMARK 500  5 LEU A  48       31.95    -94.99                                   
REMARK 500  6 GLN A  32       34.56    -95.07                                   
REMARK 500  6 ASP A  35       44.75    -94.49                                   
REMARK 500  6 ILE A 118      -72.77    -51.48                                   
REMARK 500  7 SER A   4       92.18    -65.30                                   
REMARK 500  7 ASP A  35       45.85    -98.48                                   
REMARK 500  7 LEU A  48       30.90    -95.63                                   
REMARK 500  7 ILE A 118      -71.07    -59.26                                   
REMARK 500  8 ASP A  35       42.89   -105.88                                   
REMARK 500  8 ILE A 118      -71.63    -56.95                                   
REMARK 500  9 ASP A  35       45.86   -103.96                                   
REMARK 500  9 LEU A  48       32.01    -98.01                                   
REMARK 500  9 LYS A  75       49.73    -94.00                                   
REMARK 500 10 PHE A   3      176.92    -57.74                                   
REMARK 500 10 ASP A  35       41.60    -93.10                                   
REMARK 500 11 ASP A  35       46.32   -104.24                                   
REMARK 500 12 ASP A  35       52.05   -107.31                                   
REMARK 500 12 LEU A  48       32.37    -97.01                                   
REMARK 500 12 GLN A  74     -167.62   -111.68                                   
REMARK 500 12 LYS A  75       59.44   -110.43                                   
REMARK 500 13 PHE A   3      175.08    -54.88                                   
REMARK 500 13 LEU A  48       32.15    -96.05                                   
REMARK 500 13 ILE A 118      -71.78    -51.74                                   
REMARK 500 14 ASP A  35       40.50    -95.06                                   
REMARK 500 14 ILE A 118      -70.97    -61.27                                   
REMARK 500 15 ASP A  35       45.11    -95.70                                   
REMARK 500 15 PRO A  99     -179.50    -69.80                                   
REMARK 500 16 ASP A  35       44.10   -100.49                                   
REMARK 500 16 LEU A  48       30.94    -99.61                                   
REMARK 500 17 ASP A  35       38.93    -97.29                                   
REMARK 500 17 LEU A  48       32.88    -97.43                                   
REMARK 500 17 ILE A 118      -70.91    -61.31                                   
REMARK 500 18 ASP A  35       44.39    -99.51                                   
REMARK 500 18 LEU A  48       33.44    -98.10                                   
REMARK 500 19 GLN A  32       42.40    -92.22                                   
REMARK 500 19 ASP A  35       52.27   -109.08                                   
REMARK 500 19 GLU A 136       33.48    -95.67                                   
REMARK 500 20 ASP A  35       36.24    -96.45                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      53 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2KM4 A    1   131  UNP    Q05543   RT103_YEAST      1    131             
SEQADV 2KM4 ALA A    2  UNP  Q05543    PRO     2 CONFLICT                       
SEQADV 2KM4 ALA A  132  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 ALA A  133  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 ALA A  134  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 LEU A  135  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 GLU A  136  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  137  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  138  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  139  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  140  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  141  UNP  Q05543              EXPRESSION TAG                 
SEQADV 2KM4 HIS A  142  UNP  Q05543              EXPRESSION TAG                 
SEQRES   1 A  142  MET ALA PHE SER SER GLU GLN PHE THR THR LYS LEU ASN          
SEQRES   2 A  142  THR LEU GLU ASP SER GLN GLU SER ILE SER SER ALA SER          
SEQRES   3 A  142  LYS TRP LEU LEU LEU GLN TYR ARG ASP ALA PRO LYS VAL          
SEQRES   4 A  142  ALA GLU MET TRP LYS GLU TYR MET LEU ARG PRO SER VAL          
SEQRES   5 A  142  ASN THR ARG ARG LYS LEU LEU GLY LEU TYR LEU MET ASN          
SEQRES   6 A  142  HIS VAL VAL GLN GLN ALA LYS GLY GLN LYS ILE ILE GLN          
SEQRES   7 A  142  PHE GLN ASP SER PHE GLY LYS VAL ALA ALA GLU VAL LEU          
SEQRES   8 A  142  GLY ARG ILE ASN GLN GLU PHE PRO ARG ASP LEU LYS LYS          
SEQRES   9 A  142  LYS LEU SER ARG VAL VAL ASN ILE LEU LYS GLU ARG ASN          
SEQRES  10 A  142  ILE PHE SER LYS GLN VAL VAL ASN ASP ILE GLU ARG SER          
SEQRES  11 A  142  LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS              
HELIX    1   1 SER A    4  THR A   14  1                                  11    
HELIX    2   2 SER A   18  LEU A   31  1                                  14    
HELIX    3   3 GLN A   32  ARG A   34  5                                   3    
HELIX    4   4 ASP A   35  LEU A   48  1                                  14    
HELIX    5   5 ASN A   53  LYS A   72  1                                  20    
HELIX    6   6 GLY A   73  LYS A   75  5                                   3    
HELIX    7   7 ILE A   77  VAL A   86  1                                  10    
HELIX    8   8 VAL A   86  PHE A   98  1                                  13    
HELIX    9   9 PRO A   99  ASN A  117  1                                  19    
HELIX   10  10 SER A  120  GLU A  136  1                                  17    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1