HEADER TRANSCRIPTION REGULATOR 25-AUG-09 2KNH TITLE THE SOLUTION STRUCTURE OF THE ETAFH DOMAIN OF AML1-ETO COMPLEXED WITH TITLE 2 HEB PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN CBFA2T1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ETAFH DOMAIN (UNP RESIDUES 119-216); COMPND 5 SYNONYM: PROTEIN MTG8, PROTEIN ETO, EIGHT TWENTY ONE PROTEIN, CYCLIN- COMPND 6 D-RELATED PROTEIN, ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRANSCRIPTION FACTOR 12; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: HEB PEPTIDE (UNP RESIDUES 11-28); COMPND 12 SYNONYM: TRANSCRIPTION FACTOR HTF-4, E-BOX-BINDING PROTEIN, DNA- COMPND 13 BINDING PROTEIN HTF4; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RUNX1T1, AML1T1, CBFA2T1, CDR, ETO, MTG8, ZMYND2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PHIS PARALLAL2; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR: PHIS PARALLAL2 KEYWDS AML1-ETO, ETAFH, HEB, DNA-BINDING, METAL-BINDING, NUCLEUS, PROTO- KEYWDS 2 ONCOGENE, TRANSCRIPTION, TRANSCRIPTION REGULATION, ZINC-FINGER, KEYWDS 3 DEVELOPMENTAL PROTEIN, PHOSPHOPROTEIN, TRANSCRIPTION REGULATOR EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.PARK,T.CIERPICKI,M.TONELLI,J.H.BUSHWELLER REVDAT 4 01-MAY-24 2KNH 1 REMARK REVDAT 3 26-FEB-20 2KNH 1 REMARK SEQADV REVDAT 2 19-JAN-11 2KNH 1 JRNL REVDAT 1 06-OCT-09 2KNH 0 JRNL AUTH S.PARK,W.CHEN,T.CIERPICKI,M.TONELLI,X.CAI,N.A.SPECK, JRNL AUTH 2 J.H.BUSHWELLER JRNL TITL STRUCTURE OF THE AML1-ETO ETAFH DOMAIN-HEB PEPTIDE COMPLEX JRNL TITL 2 AND ITS CONTRIBUTION TO AML1-ETO ACTIVITY. JRNL REF BLOOD V. 113 3558 2009 JRNL REFN ISSN 0006-4971 JRNL PMID 19204326 JRNL DOI 10.1182/BLOOD-2008-06-161307 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KNH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000101339. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 350 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 25 MM BIS-TRIS, 1 MM EDTA, 350 REMARK 210 MM SODIUM CHLORIDE, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HCCH-TOCSY; 3D HNHA; 3D HNCO; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA GLN A 318 H PHE A 323 1.22 REMARK 500 HB ILE A 288 HG12 ILE A 292 1.31 REMARK 500 O THR A 309 H PHE A 313 1.55 REMARK 500 O GLU A 312 H LYS A 316 1.57 REMARK 500 O LYS A 273 H PHE A 277 1.58 REMARK 500 O PHE A 277 HG1 THR A 280 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 286 26.07 -78.43 REMARK 500 1 PRO A 290 1.77 -65.05 REMARK 500 1 LEU A 308 -158.19 -119.19 REMARK 500 1 ASN A 322 78.08 62.70 REMARK 500 1 PRO A 324 83.14 -61.76 REMARK 500 1 LEU A 325 -118.23 -128.08 REMARK 500 1 LYS A 352 71.14 39.32 REMARK 500 1 GLN A 353 -147.24 -91.07 REMARK 500 1 TYR A 358 110.80 60.43 REMARK 500 1 GLN A 361 103.92 59.54 REMARK 500 1 THR B 13 111.10 61.34 REMARK 500 1 ASP B 19 0.66 -66.58 REMARK 500 1 LEU B 20 -34.65 -135.69 REMARK 500 1 ASP B 22 143.97 63.95 REMARK 500 1 PHE B 23 -38.38 -157.83 REMARK 500 2 ASP A 287 35.97 -163.35 REMARK 500 2 PRO A 290 1.20 -64.85 REMARK 500 2 LEU A 308 -158.46 -116.73 REMARK 500 2 ASN A 322 27.63 41.51 REMARK 500 2 PRO A 324 -73.25 -50.16 REMARK 500 2 LEU A 325 93.74 58.88 REMARK 500 2 LYS A 352 37.31 -88.59 REMARK 500 2 ASN A 354 107.95 59.43 REMARK 500 2 LEU A 359 -63.49 -98.11 REMARK 500 2 GLN A 361 -77.78 64.69 REMARK 500 2 GLU A 363 -156.63 -110.14 REMARK 500 2 ASP B 19 2.45 -67.75 REMARK 500 2 LEU B 20 -36.35 -147.69 REMARK 500 2 ASP B 22 165.43 60.59 REMARK 500 2 PHE B 23 -40.70 -179.31 REMARK 500 2 MET B 26 100.94 61.25 REMARK 500 3 ASP A 287 33.71 -147.18 REMARK 500 3 PRO A 290 0.66 -65.36 REMARK 500 3 LEU A 308 -160.56 -118.08 REMARK 500 3 PHE A 323 -61.36 -156.47 REMARK 500 3 PRO A 324 -72.17 -83.76 REMARK 500 3 LEU A 325 177.11 53.13 REMARK 500 3 ALA A 351 -20.06 72.88 REMARK 500 3 LYS A 352 -7.34 68.63 REMARK 500 3 GLN A 353 19.24 -162.42 REMARK 500 3 ASN A 354 67.85 -166.20 REMARK 500 3 TYR A 358 97.29 44.48 REMARK 500 3 GLN A 361 -68.54 -169.44 REMARK 500 3 HIS A 362 33.32 -166.93 REMARK 500 3 GLU A 363 113.13 60.11 REMARK 500 3 THR B 13 124.17 61.42 REMARK 500 4 ASN A 286 30.16 -73.66 REMARK 500 4 ASP A 287 23.81 -167.63 REMARK 500 4 PRO A 290 0.19 -64.88 REMARK 500 4 LEU A 308 -158.36 -121.44 REMARK 500 REMARK 500 THIS ENTRY HAS 309 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16467 RELATED DB: BMRB DBREF 2KNH A 267 364 UNP Q06455 MTG8_HUMAN 119 216 DBREF 2KNH B 11 28 UNP Q99081 HTF4_HUMAN 11 28 SEQADV 2KNH GLY A -5 UNP Q06455 EXPRESSION TAG SEQADV 2KNH ALA A -4 UNP Q06455 EXPRESSION TAG SEQADV 2KNH MET A -3 UNP Q06455 EXPRESSION TAG SEQADV 2KNH GLY A -2 UNP Q06455 EXPRESSION TAG SEQADV 2KNH SER A -1 UNP Q06455 EXPRESSION TAG SEQRES 1 A 103 GLY ALA MET GLY SER GLY ALA ARG GLN LEU SER LYS LEU SEQRES 2 A 103 LYS ARG PHE LEU THR THR LEU GLN GLN PHE GLY ASN ASP SEQRES 3 A 103 ILE SER PRO GLU ILE GLY GLU ARG VAL ARG THR LEU VAL SEQRES 4 A 103 LEU GLY LEU VAL ASN SER THR LEU THR ILE GLU GLU PHE SEQRES 5 A 103 HIS SER LYS LEU GLN GLU ALA THR ASN PHE PRO LEU ARG SEQRES 6 A 103 PRO PHE VAL ILE PRO PHE LEU LYS ALA ASN LEU PRO LEU SEQRES 7 A 103 LEU GLN ARG GLU LEU LEU HIS CYS ALA ARG LEU ALA LYS SEQRES 8 A 103 GLN ASN PRO ALA GLN TYR LEU ALA GLN HIS GLU GLN SEQRES 1 B 18 ILE GLY THR ASP LYS GLU LEU SER ASP LEU LEU ASP PHE SEQRES 2 B 18 SER ALA MET PHE SER HELIX 1 1 GLN A 270 GLY A 285 1 16 HELIX 2 2 GLU A 291 ASN A 305 1 15 HELIX 3 3 THR A 309 THR A 321 1 13 HELIX 4 4 PHE A 328 LYS A 352 1 25 HELIX 5 5 ASN A 354 TYR A 358 5 5 HELIX 6 6 ASP B 14 ASP B 19 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1