HEADER TRANSCRIPTION REGULATOR 16-OCT-09 2KPJ TITLE SOLUTION STRUCTURE OF PROTEIN SOS-RESPONSE TRANSCRIPTIONAL REPRESSOR, TITLE 2 LEXA FROM EUBACTERIUM RECTALE. NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET ERR9A COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOS-RESPONSE TRANSCRIPTIONAL REPRESSOR, LEXA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 1-86; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EUBACTERIUM RECTALE ATCC 33656; SOURCE 3 ORGANISM_TAXID: 515619; SOURCE 4 STRAIN: ATCC 33656 / VPI 0990; SOURCE 5 GENE: EUBREC_1258; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: BL21(DE3)+MAGIC KEYWDS NESG, GFT, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, TRANSCRIPTION REGULATOR EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.WU,A.ELETSKY,D.LEE,A.GHOSH,W.BUCHWALD,Q.ZHANG,H.JANJUA,E.GARCIA, AUTHOR 2 R.NAIR,D.SUKUMARAN,B.ROST,T.ACTON,R.XIAO,J.EVERETT,G.T.MONTELIONE, AUTHOR 3 T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 14-JUN-23 2KPJ 1 REMARK REVDAT 2 26-FEB-20 2KPJ 1 REMARK SEQADV REVDAT 1 17-NOV-09 2KPJ 0 JRNL AUTH Y.WU,A.ELETSKY,D.LEE,A.GHOSH,W.BUCHWALD,Q.ZHANG,H.JANJUA, JRNL AUTH 2 E.GARCIA,R.NAIR,D.SUKUMARAN,B.ROST,T.ACTON,J.EVERETT, JRNL AUTH 3 G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF PROTEIN SOS-RESPONSE TRANSCRIPTIONAL JRNL TITL 2 REPRESSOR, LEXA FROM EUBACTERIUM RECTALE. NORTHEAST JRNL TITL 3 STRUCTURAL GENOMICS CONSORTIUM TARGET ERR9A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AUTOASSIGN, CNS, PSVS, TALOS REMARK 3 AUTHORS : ZIMMERMAN, MOSELEY, KULIKOWSKI AND MONTELIONE REMARK 3 (AUTOASSIGN), BRUNGER, ADAMS, CLORE, GROS, NILGES REMARK 3 AND READ (CNS), BHATTACHARYA AND MONTELIONE (PSVS), REMARK 3 CORNILESCU, DELAGLIO AND BAX (TALOS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KPJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000101412. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O; 1.0 MM REMARK 210 [U-5% 13C; U-100% 15N] PROTEIN, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 4,3D, GFT HNNCABCA; 4,3D, GFT REMARK 210 CABCACONNH; 4,3D, GFT HCCH COSY; REMARK 210 3D, 15N-13C RESOLVEDSIMULTANIOUS REMARK 210 NOESY; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; DMX REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUTOSTRUCTURE, CYANA, NMRPIPE, REMARK 210 XEASY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 2 66.72 60.38 REMARK 500 1 LYS A 72 41.53 -78.83 REMARK 500 1 LYS A 73 46.93 -83.68 REMARK 500 1 HIS A 90 -71.49 -104.23 REMARK 500 1 HIS A 91 102.19 67.99 REMARK 500 2 ASN A 62 71.27 51.93 REMARK 500 2 ASP A 77 79.00 -69.40 REMARK 500 2 GLU A 82 -177.25 66.46 REMARK 500 2 SER A 83 -175.12 69.91 REMARK 500 3 LYS A 73 31.08 -88.88 REMARK 500 3 ASP A 77 112.76 -166.35 REMARK 500 3 HIS A 90 88.49 54.97 REMARK 500 3 HIS A 92 -87.51 61.33 REMARK 500 3 HIS A 93 22.44 -144.01 REMARK 500 4 ASN A 75 91.29 70.68 REMARK 500 4 HIS A 89 78.69 43.89 REMARK 500 5 LYS A 3 -76.75 -138.21 REMARK 500 5 ASN A 75 118.48 70.49 REMARK 500 5 TYR A 85 -162.24 59.48 REMARK 500 5 LEU A 87 -161.03 64.17 REMARK 500 6 GLU A 22 -37.71 73.51 REMARK 500 6 LYS A 72 33.63 -83.53 REMARK 500 6 PRO A 80 -164.74 -66.70 REMARK 500 6 TYR A 85 -164.41 61.08 REMARK 500 6 HIS A 90 -68.85 70.43 REMARK 500 6 HIS A 92 78.77 65.87 REMARK 500 7 VAL A 2 117.37 75.71 REMARK 500 7 LYS A 72 33.58 -78.22 REMARK 500 7 PRO A 80 -164.64 -73.82 REMARK 500 7 TYR A 85 80.11 58.31 REMARK 500 7 THR A 86 82.42 65.47 REMARK 500 7 HIS A 91 -71.55 -102.45 REMARK 500 8 ASP A 4 111.48 71.42 REMARK 500 8 GLU A 70 150.45 -48.62 REMARK 500 8 ASN A 75 102.54 73.49 REMARK 500 8 THR A 78 107.51 -48.59 REMARK 500 8 HIS A 90 -161.36 -116.84 REMARK 500 9 HIS A 93 66.94 -100.80 REMARK 500 10 ASP A 4 96.72 -65.13 REMARK 500 10 ILE A 63 -87.31 -104.56 REMARK 500 10 GLU A 82 103.21 -55.59 REMARK 500 10 HIS A 91 90.89 61.75 REMARK 500 11 LYS A 3 103.23 61.74 REMARK 500 11 LYS A 73 44.23 -84.49 REMARK 500 11 ASN A 75 33.17 -92.98 REMARK 500 11 HIS A 92 -79.13 -94.14 REMARK 500 11 HIS A 93 141.17 67.86 REMARK 500 12 VAL A 2 -58.86 74.30 REMARK 500 12 LYS A 3 176.97 66.21 REMARK 500 12 HIS A 91 -173.48 63.19 REMARK 500 REMARK 500 THIS ENTRY HAS 86 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16557 RELATED DB: BMRB REMARK 900 RELATED ID: ERR9 RELATED DB: TARGETDB DBREF 2KPJ A 1 86 UNP C4Z801 C4Z801_EUBR3 1 86 SEQADV 2KPJ LEU A 87 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ GLU A 88 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 89 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 90 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 91 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 92 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 93 UNP C4Z801 EXPRESSION TAG SEQADV 2KPJ HIS A 94 UNP C4Z801 EXPRESSION TAG SEQRES 1 A 94 MET VAL LYS ASP LYS GLN LYS ALA ILE PHE SER GLU ASN SEQRES 2 A 94 LEU ASN SER TYR ILE ALA LYS SER GLU LYS THR GLN LEU SEQRES 3 A 94 GLU ILE ALA LYS SER ILE GLY VAL SER PRO GLN THR PHE SEQRES 4 A 94 ASN THR TRP CYS LYS GLY ILE ALA ILE PRO ARG MET GLY SEQRES 5 A 94 LYS VAL GLN ALA LEU ALA ASP TYR PHE ASN ILE ASN LYS SEQRES 6 A 94 SER ASP LEU ILE GLU ASP LYS LYS LEU ASN ILE ASP THR SEQRES 7 A 94 VAL PRO ILE GLU SER GLY TYR THR LEU GLU HIS HIS HIS SEQRES 8 A 94 HIS HIS HIS HELIX 1 1 ASP A 4 ALA A 19 1 16 HELIX 2 2 THR A 24 GLY A 33 1 10 HELIX 3 3 SER A 35 LYS A 44 1 10 HELIX 4 4 ARG A 50 ASN A 62 1 13 HELIX 5 5 LYS A 65 GLU A 70 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1