data_2KPP # _entry.id 2KPP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KPP pdb_00002kpp 10.2210/pdb2kpp/pdb RCSB RCSB101418 ? ? BMRB 16563 ? ? WWPDB D_1000101418 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 16563 BMRB unspecified . LkR112 TargetDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KPP _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-18 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tang, Y.' 1 'Xiao, R.' 2 'Ciccosanti, C.' 3 'Janjua, H.' 4 'Lee, D.Y.' 5 'Everett, J.K.' 6 'Swapna, G.V.T.' 7 'Acton, T.B.' 8 'Rost, B.' 9 'Montelione, G.T.' 10 'Northeast Structural Genomics Consortium (NESG)' 11 # _citation.id primary _citation.title ;Solution NMR structure of Lin0431 protein from Listeria innocua reveals high structural similarity with domain II of bacterial transcription antitermination protein NusG. ; _citation.journal_abbrev Proteins _citation.journal_volume 78 _citation.page_first 2563 _citation.page_last 2568 _citation.year 2010 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20602357 _citation.pdbx_database_id_DOI 10.1002/prot.22760 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tang, Y.' 1 ? primary 'Xiao, R.' 2 ? primary 'Ciccosanti, C.' 3 ? primary 'Janjua, H.' 4 ? primary 'Lee, D.Y.' 5 ? primary 'Everett, J.K.' 6 ? primary 'Swapna, G.V.' 7 ? primary 'Acton, T.B.' 8 ? primary 'Rost, B.' 9 ? primary 'Montelione, G.T.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Lin0431 protein' _entity.formula_weight 12808.544 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 36-140' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKNTGDEVVAIISQNGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVCL PHKVFVEIKSTQKDSKDPDTDLIVPNLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MKNTGDEVVAIISQNGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVCL PHKVFVEIKSTQKDSKDPDTDLIVPNLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier LkR112 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ASN n 1 4 THR n 1 5 GLY n 1 6 ASP n 1 7 GLU n 1 8 VAL n 1 9 VAL n 1 10 ALA n 1 11 ILE n 1 12 ILE n 1 13 SER n 1 14 GLN n 1 15 ASN n 1 16 GLY n 1 17 LYS n 1 18 VAL n 1 19 ILE n 1 20 ARG n 1 21 GLU n 1 22 ILE n 1 23 PRO n 1 24 LEU n 1 25 THR n 1 26 GLY n 1 27 HIS n 1 28 LYS n 1 29 GLY n 1 30 ASN n 1 31 GLU n 1 32 GLN n 1 33 PHE n 1 34 THR n 1 35 ILE n 1 36 LYS n 1 37 GLY n 1 38 LYS n 1 39 GLY n 1 40 ALA n 1 41 GLN n 1 42 TYR n 1 43 ASN n 1 44 LEU n 1 45 MET n 1 46 GLU n 1 47 VAL n 1 48 ASP n 1 49 GLY n 1 50 GLU n 1 51 ARG n 1 52 ILE n 1 53 ARG n 1 54 ILE n 1 55 LYS n 1 56 GLU n 1 57 ASP n 1 58 ASN n 1 59 SER n 1 60 PRO n 1 61 ASP n 1 62 GLN n 1 63 VAL n 1 64 GLY n 1 65 VAL n 1 66 LYS n 1 67 MET n 1 68 GLY n 1 69 TRP n 1 70 LYS n 1 71 SER n 1 72 LYS n 1 73 ALA n 1 74 GLY n 1 75 ASP n 1 76 THR n 1 77 ILE n 1 78 VAL n 1 79 CYS n 1 80 LEU n 1 81 PRO n 1 82 HIS n 1 83 LYS n 1 84 VAL n 1 85 PHE n 1 86 VAL n 1 87 GLU n 1 88 ILE n 1 89 LYS n 1 90 SER n 1 91 THR n 1 92 GLN n 1 93 LYS n 1 94 ASP n 1 95 SER n 1 96 LYS n 1 97 ASP n 1 98 PRO n 1 99 ASP n 1 100 THR n 1 101 ASP n 1 102 LEU n 1 103 ILE n 1 104 VAL n 1 105 PRO n 1 106 ASN n 1 107 LEU n 1 108 GLU n 1 109 HIS n 1 110 HIS n 1 111 HIS n 1 112 HIS n 1 113 HIS n 1 114 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lin0431 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria innocua' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1642 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector LkR112-36-140-21.21 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q92EM7_LISIN _struct_ref.pdbx_db_accession Q92EM7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KNTGDEVVAIISQNGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVCLP HKVFVEIKSTQKDSKDPDTDLIVPN ; _struct_ref.pdbx_align_begin 36 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KPP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92EM7 _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 140 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KPP MET A 1 ? UNP Q92EM7 ? ? 'initiating methionine' 1 1 1 2KPP LEU A 107 ? UNP Q92EM7 ? ? 'expression tag' 107 2 1 2KPP GLU A 108 ? UNP Q92EM7 ? ? 'expression tag' 108 3 1 2KPP HIS A 109 ? UNP Q92EM7 ? ? 'expression tag' 109 4 1 2KPP HIS A 110 ? UNP Q92EM7 ? ? 'expression tag' 110 5 1 2KPP HIS A 111 ? UNP Q92EM7 ? ? 'expression tag' 111 6 1 2KPP HIS A 112 ? UNP Q92EM7 ? ? 'expression tag' 112 7 1 2KPP HIS A 113 ? UNP Q92EM7 ? ? 'expression tag' 113 8 1 2KPP HIS A 114 ? UNP Q92EM7 ? ? 'expression tag' 114 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 2 '2D High Resolution 1H-13C HSQC' 1 4 1 '2D aromatic 1H-13C HSQC' 1 5 1 '3D HNCO' 1 6 1 '3D HNCACB' 1 7 1 '3D HBHA(CO)NH' 1 8 1 '3D HN(COCA)CB' 1 9 1 '3D HCCH-COSY' 1 10 1 '3D HCCH-TOCSY' 1 11 1 '3D CCH-TOCSY' 1 12 1 '3D 1H-13C aliphatic NOESY' 1 13 1 '3D 1H-13C aromatic NOESY' 1 14 1 '3D simutaeous NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 200 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.851 mM [U-100% 13C; U-100% 15N] LkR112, 20 mM MES, 200 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 % NaN3, 50 uM DSS, 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '0.887 mM [U-5% 13C; U-100% 15N] LkR112, 20 mM MES, 200 mM NaCl, 5 mM CaCl2, 10 mM DTT, 0.02 % NaN3, 50 uM DSS, 95% H2O/5% D2O' 2 '95% H2O/5% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KPP _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KPP _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KPP _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin 2.1 1 'Zimmerman, Moseley, Kulikowski and Montelione' 'chemical shift assignment' AutoAssign ? 2 Goddard 'data analysis' Sparky 3.110 3 'Huang, Tejero, Powers and Montelione' 'structure solution' AutoStructure 2.2.1 4 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 3.0 5 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRPipe 2.3 6 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.1 7 'Bhattacharya and Montelione' 'structure validation' PSVS ? 8 'Tejero and Montelione' 'pdb analysis' PdbStat 5.1 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KPP _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KPP _struct.title 'Solution NMR structure of Lin0431 protein from Listeria innocua. Northeast Structural Genomics Consortium Target LkR112' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KPP _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;solution NMR structure, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 62 ? GLY A 68 ? GLN A 62 GLY A 68 1 ? 7 HELX_P HELX_P2 2 LEU A 80 ? HIS A 82 ? LEU A 80 HIS A 82 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 17 ? PRO A 23 ? LYS A 17 PRO A 23 A 2 VAL A 8 ? GLN A 14 ? VAL A 8 GLN A 14 A 3 VAL A 84 ? SER A 90 ? VAL A 84 SER A 90 A 4 THR A 76 ? CYS A 79 ? THR A 76 CYS A 79 B 1 ASN A 30 ? LYS A 38 ? ASN A 30 LYS A 38 B 2 GLN A 41 ? ASP A 48 ? GLN A 41 ASP A 48 B 3 ILE A 52 ? ASP A 57 ? ILE A 52 ASP A 57 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 22 ? O ILE A 22 N ALA A 10 ? N ALA A 10 A 2 3 N ILE A 11 ? N ILE A 11 O GLU A 87 ? O GLU A 87 A 3 4 O VAL A 84 ? O VAL A 84 N CYS A 79 ? N CYS A 79 B 1 2 N ILE A 35 ? N ILE A 35 O ASN A 43 ? O ASN A 43 B 2 3 N LEU A 44 ? N LEU A 44 O GLU A 56 ? O GLU A 56 # _atom_sites.entry_id 2KPP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 CYS 79 79 79 CYS CYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 HIS 82 82 82 HIS HIS A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 HIS 113 113 113 HIS HIS A . n A 1 114 HIS 114 114 114 HIS HIS A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-26 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Database references' 7 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_database_status 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id LkR112-1 0.851 ? mM '[U-100% 13C; U-100% 15N]' 1 MES-2 20 ? mM ? 1 NaCl-3 200 ? mM ? 1 CaCl2-4 5 ? mM ? 1 DTT-5 10 ? mM ? 1 NaN3-6 0.02 ? % ? 1 DSS-7 50 ? uM ? 1 LkR112-8 0.887 ? mM '[U-5% 13C; U-100% 15N]' 2 MES-9 20 ? mM ? 2 NaCl-10 200 ? mM ? 2 CaCl2-11 5 ? mM ? 2 DTT-12 10 ? mM ? 2 NaN3-13 0.02 ? % ? 2 DSS-14 50 ? uM ? 2 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 3 _pdbx_validate_close_contact.auth_atom_id_1 HB3 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 46 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HH21 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 53 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.34 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 7 ? ? -64.03 99.35 2 1 ASN A 15 ? ? 66.28 -12.76 3 1 LEU A 24 ? ? -94.91 -62.43 4 1 LYS A 38 ? ? -114.25 -169.86 5 1 ALA A 40 ? ? 67.00 -2.82 6 1 GLU A 56 ? ? -175.47 138.65 7 1 SER A 71 ? ? -157.49 9.83 8 1 ALA A 73 ? ? -58.31 107.54 9 1 ASP A 94 ? ? -69.98 83.71 10 1 HIS A 110 ? ? 174.21 18.12 11 1 HIS A 112 ? ? 176.16 -33.06 12 2 LYS A 2 ? ? 64.34 71.02 13 2 SER A 71 ? ? -164.15 9.64 14 2 LYS A 96 ? ? -173.95 -179.97 15 2 ASN A 106 ? ? 63.63 64.19 16 2 HIS A 110 ? ? -130.20 -85.52 17 2 HIS A 111 ? ? 59.54 80.96 18 3 ASP A 6 ? ? -106.43 44.05 19 3 ASN A 58 ? ? -97.19 45.16 20 3 SER A 71 ? ? -141.81 17.64 21 3 PRO A 98 ? ? -71.94 27.29 22 4 LYS A 2 ? ? -159.23 84.53 23 4 ASN A 15 ? ? 57.45 19.21 24 4 GLN A 62 ? ? 56.59 19.53 25 4 SER A 71 ? ? -162.00 13.57 26 5 ARG A 20 ? ? -173.76 142.24 27 5 GLU A 50 ? ? 57.76 18.33 28 5 SER A 71 ? ? -161.65 25.44 29 5 GLN A 92 ? ? -69.77 -178.46 30 5 SER A 95 ? ? -62.72 81.24 31 5 PRO A 98 ? ? -75.77 -70.04 32 5 ASP A 99 ? ? 55.12 16.92 33 5 ASP A 101 ? ? -62.60 87.89 34 6 SER A 71 ? ? -169.19 18.83 35 6 ALA A 73 ? ? -63.61 93.43 36 6 HIS A 109 ? ? -79.08 27.49 37 7 ASP A 6 ? ? -68.64 96.29 38 7 ASN A 15 ? ? 57.50 15.58 39 7 LYS A 38 ? ? -66.85 99.42 40 7 ASN A 58 ? ? -115.15 75.58 41 7 SER A 71 ? ? -167.27 12.18 42 7 CYS A 79 ? ? -118.99 73.32 43 7 LYS A 96 ? ? -90.00 35.99 44 7 PRO A 105 ? ? -87.21 39.23 45 8 LEU A 24 ? ? -97.64 -65.50 46 8 ALA A 40 ? ? 72.96 -41.37 47 8 GLN A 41 ? ? -50.85 108.23 48 8 ASN A 58 ? ? -111.19 63.66 49 8 SER A 71 ? ? -156.31 6.79 50 8 PRO A 81 ? ? -69.25 0.10 51 8 GLN A 92 ? ? -89.07 -83.50 52 8 ASP A 99 ? ? -67.74 85.65 53 8 THR A 100 ? ? -100.92 75.72 54 8 ASN A 106 ? ? -63.24 94.62 55 8 HIS A 109 ? ? -172.31 105.46 56 9 ASN A 15 ? ? 59.64 8.66 57 9 ASN A 58 ? ? -107.80 51.36 58 9 SER A 71 ? ? -164.97 15.74 59 9 PRO A 98 ? ? -63.81 78.05 60 9 THR A 100 ? ? -161.66 20.82 61 10 GLU A 7 ? ? -66.17 96.88 62 10 LYS A 38 ? ? -66.22 93.85 63 10 ASN A 58 ? ? -102.01 74.94 64 10 SER A 71 ? ? -155.77 28.35 65 10 PRO A 105 ? ? -46.82 99.75 66 10 HIS A 112 ? ? -57.68 107.23 67 11 LYS A 2 ? ? 55.63 71.28 68 11 SER A 71 ? ? -168.65 6.52 69 11 ALA A 73 ? ? -59.40 99.99 70 11 LEU A 102 ? ? -153.34 83.72 71 12 ASN A 3 ? ? -80.50 42.74 72 12 ASN A 15 ? ? 58.74 16.85 73 12 GLU A 56 ? ? -172.93 138.63 74 12 ASN A 58 ? ? -100.41 74.80 75 12 SER A 71 ? ? -175.25 25.44 76 12 ALA A 73 ? ? -59.16 96.26 77 12 SER A 95 ? ? -84.06 30.84 78 12 ASP A 101 ? ? 71.04 101.83 79 12 ASN A 106 ? ? -69.60 86.47 80 13 ARG A 20 ? ? -173.16 148.04 81 13 SER A 71 ? ? -164.84 11.06 82 13 ALA A 73 ? ? -69.11 91.34 83 13 VAL A 104 ? ? 54.20 96.17 84 13 GLU A 108 ? ? -120.52 -168.81 85 13 HIS A 110 ? ? -68.65 92.22 86 14 ASN A 15 ? ? 59.72 17.25 87 14 GLU A 31 ? ? -161.19 116.92 88 14 GLN A 62 ? ? 59.54 13.48 89 14 SER A 71 ? ? -172.20 26.42 90 14 ALA A 73 ? ? -61.15 96.65 91 14 ASP A 99 ? ? -97.12 -95.16 92 14 THR A 100 ? ? 173.04 -28.70 93 14 PRO A 105 ? ? -58.99 172.43 94 14 ASN A 106 ? ? -59.39 -174.42 95 14 LEU A 107 ? ? -57.08 99.84 96 15 ASN A 15 ? ? 57.01 10.27 97 15 LEU A 24 ? ? -92.96 -60.08 98 15 ASN A 58 ? ? -109.79 51.06 99 15 GLN A 62 ? ? 59.26 16.76 100 15 SER A 71 ? ? -159.56 -26.83 101 15 SER A 95 ? ? -164.15 104.55 102 16 ASN A 15 ? ? 59.21 17.40 103 16 SER A 71 ? ? -173.68 22.94 104 16 ALA A 73 ? ? -75.65 32.83 105 16 GLN A 92 ? ? -80.48 -138.85 106 16 ASP A 99 ? ? -174.15 101.20 107 16 HIS A 110 ? ? -58.92 105.02 108 16 HIS A 112 ? ? -101.27 60.97 109 17 ASP A 6 ? ? -69.89 92.11 110 17 ASN A 58 ? ? -100.89 67.95 111 17 SER A 71 ? ? -163.76 -28.65 112 17 ALA A 73 ? ? -64.09 94.50 113 17 GLN A 92 ? ? -122.58 -167.88 114 17 PRO A 105 ? ? -73.44 -164.63 115 17 ASN A 106 ? ? -52.13 104.21 116 18 SER A 71 ? ? -168.42 17.49 117 18 ALA A 73 ? ? -59.28 108.97 118 18 LYS A 93 ? ? -68.99 73.40 119 18 ASP A 94 ? ? 63.60 136.43 120 18 ASP A 101 ? ? -90.32 44.24 121 18 HIS A 111 ? ? 69.76 -29.97 122 18 HIS A 112 ? ? -52.70 99.62 123 19 ASN A 15 ? ? 57.60 17.68 124 19 ARG A 20 ? ? -170.14 142.53 125 19 GLU A 56 ? ? -171.93 144.75 126 19 SER A 71 ? ? -170.70 18.97 127 19 ALA A 73 ? ? -63.13 88.89 128 19 CYS A 79 ? ? -114.03 76.44 129 19 SER A 95 ? ? -88.90 49.17 130 20 ASN A 15 ? ? 59.77 14.10 131 20 LEU A 24 ? ? -96.30 -61.72 132 20 SER A 71 ? ? -165.89 12.68 133 20 THR A 100 ? ? -107.07 -62.73 #