HEADER    PROTEIN TRANSPORT                       10-MAR-10   2KVA              
TITLE     SOLUTION STRUCTURE OF CI-MPR LIGAND-FREE DOMAIN 5                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR;           
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CI-MPR_DOMAIN5;                                            
COMPND   5 SYNONYM: CI MAN-6-P RECEPTOR, CI-MPR, M6PR, INSULIN-LIKE GROWTH      
COMPND   6 FACTOR 2 RECEPTOR, INSULIN-LIKE GROWTH FACTOR II RECEPTOR, IGF-II    
COMPND   7 RECEPTOR, 300 KDA MANNOSE 6-PHOSPHATE RECEPTOR, MPR 300;             
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: BOS TAURUS;                                     
SOURCE   3 ORGANISM_COMMON: BOVINE;                                             
SOURCE   4 ORGANISM_TAXID: 9913;                                                
SOURCE   5 GENE: IGF2R, M6P;                                                    
SOURCE   6 EXPRESSION_SYSTEM: PICHIA PASTORIS;                                  
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 4922;                                       
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: X-33;                                      
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PPICZ-ALPHA-A                             
KEYWDS    TRANSPORT, LYSOSOME, MANNOSE, RECEPTOR, SUGAR BINDING, GLYCOPROTEIN,  
KEYWDS   2 MEMBRANE, PHOSPHOPROTEIN, TRANSMEMBRANE, DISULFIDE BOND, PROTEIN     
KEYWDS   3 TRANSPORT                                                            
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    L.J.OLSON,F.C.PETERSON,B.F.VOLKMAN,N.M.DAHMS                          
REVDAT   5   16-OCT-24 2KVA    1       REMARK                                   
REVDAT   4   14-JUN-23 2KVA    1       REMARK                                   
REVDAT   3   05-FEB-20 2KVA    1       REMARK SEQADV                            
REVDAT   2   28-JUL-10 2KVA    1       JRNL                                     
REVDAT   1   07-JUL-10 2KVA    0                                                
JRNL        AUTH   L.J.OLSON,F.C.PETERSON,A.CASTONGUAY,R.N.BOHNSACK,M.KUDO,     
JRNL        AUTH 2 R.R.GOTSCHALL,W.M.CANFIELD,B.F.VOLKMAN,N.M.DAHMS             
JRNL        TITL   STRUCTURAL BASIS FOR RECOGNITION OF                          
JRNL        TITL 2 PHOSPHODIESTER-CONTAINING LYSOSOMAL ENZYMES BY THE           
JRNL        TITL 3 CATION-INDEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR.             
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 107 12493 2010              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   20615935                                                     
JRNL        DOI    10.1073/PNAS.1004232107                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XPLOR-NIH 2.9.3                                      
REMARK   3   AUTHORS     :                                                      
REMARK   3  SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M.                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: STRUCTURES ARE BASED ON A TOTAL OF 2050   
REMARK   3  NOE CONSTRAINTS (439 INTRA, 434 SEQUENTIAL, 182 MEDIUM, AND 995     
REMARK   3  LONG RANGE) AND 165 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS.         
REMARK   4                                                                      
REMARK   4 2KVA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000101616.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 308                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 150                                
REMARK 210  PRESSURE                       : AMBIENT ATM                        
REMARK 210  SAMPLE CONTENTS                : 1 MM [U-100% 13C; U-100% 15N] CI   
REMARK 210                                   -MPR DOMAIN5-1, 10 MM [U-2H] BIS-  
REMARK 210                                   TRIS-2, 150 MM SODIUM CHLORIDE-3,  
REMARK 210                                   95% H2O/5% D2O                     
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY; 3D_13C-          
REMARK 210                                   SEPARATED_NOESY (AROMATIC)         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN 2.1, NMRPIPE 2007, XEASY   
REMARK 210                                   1.3, GARANT 2.1, CYANA 2.1         
REMARK 210   METHOD USED                   : AUTOMATED METHODS WERE USED FOR    
REMARK 210                                   BACKBONE CHEMICAL SHIFT            
REMARK 210                                   ASSIGNMENT AND ITERATIVE NOE       
REMARK 210                                   REFINEMENT. FINAL STRUCTURES       
REMARK 210                                   WERE OBTAINED BY MOLECULAR         
REMARK 210                                   DYNAMICS IN EXPLICIT SOLVENT       
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 LEU A 584       93.20    -67.35                                   
REMARK 500  1 ASN A 591       73.75     62.52                                   
REMARK 500  1 ALA A 613      170.41     71.68                                   
REMARK 500  1 ALA A 635      -14.11   -165.78                                   
REMARK 500  1 PRO A 638       27.28    -71.49                                   
REMARK 500  1 ASP A 675       55.28     75.00                                   
REMARK 500  1 ASN A 680       97.60    -67.53                                   
REMARK 500  1 ARG A 684       75.18     38.73                                   
REMARK 500  1 ARG A 697      -85.18     59.35                                   
REMARK 500  1 GLN A 707      -79.20    -73.88                                   
REMARK 500  1 GLU A 708      -22.30    171.44                                   
REMARK 500  1 SER A 712      -73.28   -168.23                                   
REMARK 500  2 GLU A 580      -52.39     65.73                                   
REMARK 500  2 ALA A 613      175.43     67.71                                   
REMARK 500  2 ASP A 639        2.87    -57.22                                   
REMARK 500  2 ASP A 666      -49.26   -134.68                                   
REMARK 500  2 ASP A 675       67.68     64.10                                   
REMARK 500  2 ASN A 680       96.17    -69.97                                   
REMARK 500  2 ARG A 684       93.85     59.84                                   
REMARK 500  2 ARG A 697      102.24     64.69                                   
REMARK 500  2 ASP A 710      158.77     70.08                                   
REMARK 500  2 SER A 712      -20.84   -151.05                                   
REMARK 500  3 GLU A 580      -63.46   -132.04                                   
REMARK 500  3 ALA A 581       78.06   -174.87                                   
REMARK 500  3 SER A 585       84.74    -69.39                                   
REMARK 500  3 ASP A 590      171.99    179.67                                   
REMARK 500  3 ALA A 613      166.42     70.98                                   
REMARK 500  3 LYS A 620      -71.23    -89.63                                   
REMARK 500  3 PRO A 638       40.64    -69.79                                   
REMARK 500  3 ASP A 666       90.40    -61.30                                   
REMARK 500  3 ASN A 680       85.58    -56.87                                   
REMARK 500  3 ARG A 684       86.14     60.80                                   
REMARK 500  3 ARG A 697       97.86     78.07                                   
REMARK 500  3 ALA A 699       89.64     82.09                                   
REMARK 500  3 GLU A 708      163.31    168.65                                   
REMARK 500  3 ASP A 710     -158.16   -107.54                                   
REMARK 500  3 SER A 712      -15.47   -161.35                                   
REMARK 500  4 ALA A 579       83.32   -156.36                                   
REMARK 500  4 GLU A 582      -73.03   -120.82                                   
REMARK 500  4 PHE A 583       73.45   -168.24                                   
REMARK 500  4 LEU A 584      -91.98    -88.19                                   
REMARK 500  4 SER A 585     -163.62    166.08                                   
REMARK 500  4 ASN A 591       79.43     69.63                                   
REMARK 500  4 ALA A 613      179.94     67.31                                   
REMARK 500  4 ALA A 635       13.50   -160.05                                   
REMARK 500  4 PRO A 638       22.20    -73.47                                   
REMARK 500  4 TYR A 665       78.65   -106.89                                   
REMARK 500  4 ASP A 666       75.32     43.56                                   
REMARK 500  4 TYR A 679     -164.02   -100.64                                   
REMARK 500  4 ARG A 684       79.07     64.32                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     237 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500 11 ARG A 647         0.08    SIDE CHAIN                              
REMARK 500 12 ARG A 586         0.08    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2KVB   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 16772   RELATED DB: BMRB                                 
DBREF  2KVA A  584   725  UNP    P08169   MPRI_BOVIN     628    769             
SEQADV 2KVA GLU A  578  UNP  P08169              EXPRESSION TAG                 
SEQADV 2KVA ALA A  579  UNP  P08169              EXPRESSION TAG                 
SEQADV 2KVA GLU A  580  UNP  P08169              EXPRESSION TAG                 
SEQADV 2KVA ALA A  581  UNP  P08169              EXPRESSION TAG                 
SEQADV 2KVA GLU A  582  UNP  P08169              EXPRESSION TAG                 
SEQADV 2KVA PHE A  583  UNP  P08169              EXPRESSION TAG                 
SEQRES   1 A  148  GLU ALA GLU ALA GLU PHE LEU SER ARG THR GLU GLY ASP          
SEQRES   2 A  148  ASN CYS THR VAL PHE ASP SER GLN ALA GLY PHE SER PHE          
SEQRES   3 A  148  ASP LEU THR PRO LEU THR LYS LYS ASP ALA TYR LYS VAL          
SEQRES   4 A  148  GLU THR ASP LYS TYR GLU PHE HIS ILE ASN VAL CYS GLY          
SEQRES   5 A  148  PRO VAL SER VAL GLY ALA CYS PRO PRO ASP SER GLY ALA          
SEQRES   6 A  148  CYS GLN VAL SER ARG SER ASP ARG LYS SER TRP ASN LEU          
SEQRES   7 A  148  GLY ARG SER ASN ALA LYS LEU SER TYR TYR ASP GLY MET          
SEQRES   8 A  148  ILE GLN LEU THR TYR ARG ASP GLY THR PRO TYR ASN ASN          
SEQRES   9 A  148  GLU LYS ARG THR PRO ARG ALA THR LEU ILE THR PHE LEU          
SEQRES  10 A  148  CYS ASP ARG ASP ALA GLY VAL GLY PHE PRO GLU TYR GLN          
SEQRES  11 A  148  GLU GLU ASP ASN SER THR TYR ASN PHE ARG TRP TYR THR          
SEQRES  12 A  148  SER TYR ALA CYS PRO                                          
HELIX    1   1 THR A  606  THR A  609  5                                   4    
HELIX    2   2 SER A  721  CYS A  724  5                                   4    
SHEET    1   A 6 ARG A 586  GLU A 588  0                                        
SHEET    2   A 6 LEU A 662  TYR A 665 -1  O  TYR A 664   N  THR A 587           
SHEET    3   A 6 MET A 668  TYR A 673 -1  O  MET A 668   N  TYR A 665           
SHEET    4   A 6 ALA A 688  LEU A 694 -1  O  PHE A 693   N  ILE A 669           
SHEET    5   A 6 THR A 713  TYR A 719  1  O  TRP A 718   N  LEU A 694           
SHEET    6   A 6 PRO A 704  TYR A 706 -1  N  GLU A 705   O  ARG A 717           
SHEET    1   B 2 THR A 593  ASP A 596  0                                        
SHEET    2   B 2 PHE A 601  ASP A 604 -1  O  PHE A 603   N  VAL A 594           
SHEET    1   C 4 TYR A 614  GLU A 617  0                                        
SHEET    2   C 4 TYR A 621  ILE A 625 -1  O  ILE A 625   N  TYR A 614           
SHEET    3   C 4 SER A 640  SER A 646 -1  O  VAL A 645   N  GLU A 622           
SHEET    4   C 4 SER A 652  ARG A 657 -1  O  LEU A 655   N  ALA A 642           
SSBOND   1 CYS A  592    CYS A  628                          1555   1555  2.03  
SSBOND   2 CYS A  636    CYS A  643                          1555   1555  2.03  
SSBOND   3 CYS A  695    CYS A  724                          1555   1555  2.02  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1