HEADER TRANSCRIPTION 15-APR-10 2KWP TITLE SOLUTION STRUCTURE OF THE AMINOTERMINAL DOMAIN OF E. COLI NUSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION PROTEIN NUSA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: N UTILIZATION SUBSTANCE PROTEIN A, L FACTOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: NUSA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: BL21(DE3) KEYWDS NUSA, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.SCHWEIMER,M.JURK,P.ROESCH REVDAT 3 01-MAY-24 2KWP 1 REMARK REVDAT 2 26-FEB-20 2KWP 1 REMARK SEQADV REVDAT 1 14-JUL-10 2KWP 0 JRNL AUTH M.JURK,K.SCHWEIMER,P.ROESCH JRNL TITL SOLUTION STRUCTURE OF THE AMINOTERMINAL DOMAIN OF E. COLI JRNL TITL 2 NUSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000101667. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4MM [U-98% 13C; U-98% 15N] REMARK 210 PROTEIN-1, 10MM POTASSIUM REMARK 210 PHOSPHATE-2, 50MM SODIUM REMARK 210 CHLORIDE-3, 0.05MM EDTA-4, 90% REMARK 210 H2O/10% D2O; 0.4MM [U-98% 13C; U- REMARK 210 98% 15N] PROTEIN-5, 10MM REMARK 210 POTASSIUM PHOSPHATE-6, 50MM REMARK 210 SODIUM CHLORIDE-7, 0.05MM EDTA-8, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D 1H-15N REMARK 210 NOESY; 2D 1H-13C HSQC; 3D 1H-13C REMARK 210 NOESY; 3D HCCH-TOCSY; 3D CCH- REMARK 210 TOCSY; 3D CCH-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, XWINNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ARG A 60 O ASP A 95 1.57 REMARK 500 H ARG A 46 O PHE A 59 1.57 REMARK 500 O TRP A 62 H VAL A 93 1.58 REMARK 500 H ASP A 50 O ASP A 55 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 67 53.50 -141.52 REMARK 500 1 VAL A 68 115.54 -32.92 REMARK 500 1 LYS A 73 16.24 -148.32 REMARK 500 1 ASP A 84 99.10 -170.48 REMARK 500 1 GLU A 98 150.05 -44.41 REMARK 500 2 ALA A 17 26.29 44.78 REMARK 500 2 GLU A 67 61.43 -155.30 REMARK 500 2 VAL A 68 115.02 -34.94 REMARK 500 2 LYS A 73 19.96 -154.76 REMARK 500 2 ASP A 84 100.41 179.23 REMARK 500 2 THR A 106 55.54 -141.41 REMARK 500 3 VAL A 68 115.63 -30.94 REMARK 500 3 ASP A 84 105.22 -179.60 REMARK 500 3 ASP A 103 -83.83 60.99 REMARK 500 4 ALA A 17 22.03 49.91 REMARK 500 4 VAL A 68 114.92 -32.43 REMARK 500 4 ASP A 84 103.75 -174.06 REMARK 500 5 ALA A 17 26.27 44.96 REMARK 500 5 GLU A 67 62.43 -158.10 REMARK 500 5 VAL A 68 115.19 -36.92 REMARK 500 5 LYS A 73 15.81 -144.82 REMARK 500 5 ASP A 84 105.77 -177.97 REMARK 500 5 THR A 101 128.80 76.10 REMARK 500 5 ALA A 124 -90.53 60.64 REMARK 500 6 ALA A 17 27.12 44.89 REMARK 500 6 GLU A 67 62.02 -155.59 REMARK 500 6 VAL A 68 114.99 -36.53 REMARK 500 6 LYS A 73 14.29 -147.00 REMARK 500 6 ASP A 84 98.90 -179.67 REMARK 500 6 THR A 106 95.77 -43.96 REMARK 500 7 GLU A 67 57.59 -156.90 REMARK 500 7 VAL A 68 116.18 -38.46 REMARK 500 7 ASP A 84 97.42 -169.38 REMARK 500 7 PHE A 102 -78.18 -52.55 REMARK 500 7 ASP A 103 167.98 179.06 REMARK 500 7 ARG A 104 160.65 -48.22 REMARK 500 7 GLN A 108 -69.57 178.22 REMARK 500 7 LEU A 126 68.27 175.28 REMARK 500 8 ALA A 17 26.04 44.96 REMARK 500 8 GLU A 67 57.67 -157.19 REMARK 500 8 VAL A 68 116.27 -38.71 REMARK 500 8 ASP A 84 101.57 -177.35 REMARK 500 9 GLU A 67 60.58 -154.44 REMARK 500 9 VAL A 68 115.48 -35.64 REMARK 500 9 ASP A 84 98.00 -164.44 REMARK 500 9 ILE A 105 -61.30 66.24 REMARK 500 10 GLU A 67 61.38 -160.57 REMARK 500 10 VAL A 68 116.71 -39.56 REMARK 500 10 LYS A 73 15.09 -146.47 REMARK 500 10 ASP A 84 101.39 -169.72 REMARK 500 REMARK 500 THIS ENTRY HAS 105 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 20 0.32 SIDE CHAIN REMARK 500 1 ARG A 46 0.30 SIDE CHAIN REMARK 500 1 ARG A 51 0.16 SIDE CHAIN REMARK 500 1 ARG A 60 0.11 SIDE CHAIN REMARK 500 1 ARG A 61 0.28 SIDE CHAIN REMARK 500 1 ARG A 81 0.18 SIDE CHAIN REMARK 500 1 ARG A 104 0.29 SIDE CHAIN REMARK 500 1 ARG A 119 0.32 SIDE CHAIN REMARK 500 1 ARG A 123 0.14 SIDE CHAIN REMARK 500 1 ARG A 129 0.26 SIDE CHAIN REMARK 500 2 ARG A 20 0.32 SIDE CHAIN REMARK 500 2 ARG A 46 0.32 SIDE CHAIN REMARK 500 2 ARG A 51 0.24 SIDE CHAIN REMARK 500 2 ARG A 60 0.13 SIDE CHAIN REMARK 500 2 ARG A 61 0.31 SIDE CHAIN REMARK 500 2 ARG A 81 0.29 SIDE CHAIN REMARK 500 2 ARG A 104 0.31 SIDE CHAIN REMARK 500 2 ARG A 119 0.21 SIDE CHAIN REMARK 500 2 ARG A 123 0.20 SIDE CHAIN REMARK 500 2 ARG A 129 0.32 SIDE CHAIN REMARK 500 3 ARG A 20 0.21 SIDE CHAIN REMARK 500 3 ARG A 46 0.15 SIDE CHAIN REMARK 500 3 ARG A 51 0.31 SIDE CHAIN REMARK 500 3 ARG A 60 0.21 SIDE CHAIN REMARK 500 3 ARG A 61 0.26 SIDE CHAIN REMARK 500 3 ARG A 81 0.18 SIDE CHAIN REMARK 500 3 ARG A 104 0.32 SIDE CHAIN REMARK 500 3 ARG A 119 0.30 SIDE CHAIN REMARK 500 3 ARG A 123 0.31 SIDE CHAIN REMARK 500 3 ARG A 129 0.30 SIDE CHAIN REMARK 500 4 ARG A 20 0.28 SIDE CHAIN REMARK 500 4 ARG A 46 0.32 SIDE CHAIN REMARK 500 4 ARG A 51 0.31 SIDE CHAIN REMARK 500 4 ARG A 60 0.32 SIDE CHAIN REMARK 500 4 ARG A 61 0.15 SIDE CHAIN REMARK 500 4 ARG A 81 0.30 SIDE CHAIN REMARK 500 4 ARG A 104 0.19 SIDE CHAIN REMARK 500 4 ARG A 119 0.32 SIDE CHAIN REMARK 500 4 ARG A 123 0.24 SIDE CHAIN REMARK 500 5 ARG A 20 0.29 SIDE CHAIN REMARK 500 5 ARG A 46 0.30 SIDE CHAIN REMARK 500 5 ARG A 51 0.31 SIDE CHAIN REMARK 500 5 ARG A 60 0.29 SIDE CHAIN REMARK 500 5 ARG A 61 0.32 SIDE CHAIN REMARK 500 5 ARG A 81 0.31 SIDE CHAIN REMARK 500 5 ARG A 104 0.19 SIDE CHAIN REMARK 500 5 ARG A 119 0.30 SIDE CHAIN REMARK 500 5 ARG A 123 0.25 SIDE CHAIN REMARK 500 5 ARG A 129 0.08 SIDE CHAIN REMARK 500 6 ARG A 20 0.32 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 191 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16868 RELATED DB: BMRB DBREF 2KWP A 1 125 UNP P0AFF6 NUSA_ECOLI 1 125 SEQADV 2KWP LEU A 126 UNP P0AFF6 EXPRESSION TAG SEQADV 2KWP VAL A 127 UNP P0AFF6 EXPRESSION TAG SEQADV 2KWP PRO A 128 UNP P0AFF6 EXPRESSION TAG SEQADV 2KWP ARG A 129 UNP P0AFF6 EXPRESSION TAG SEQRES 1 A 129 MET ASN LYS GLU ILE LEU ALA VAL VAL GLU ALA VAL SER SEQRES 2 A 129 ASN GLU LYS ALA LEU PRO ARG GLU LYS ILE PHE GLU ALA SEQRES 3 A 129 LEU GLU SER ALA LEU ALA THR ALA THR LYS LYS LYS TYR SEQRES 4 A 129 GLU GLN GLU ILE ASP VAL ARG VAL GLN ILE ASP ARG LYS SEQRES 5 A 129 SER GLY ASP PHE ASP THR PHE ARG ARG TRP LEU VAL VAL SEQRES 6 A 129 ASP GLU VAL THR GLN PRO THR LYS GLU ILE THR LEU GLU SEQRES 7 A 129 ALA ALA ARG TYR GLU ASP GLU SER LEU ASN LEU GLY ASP SEQRES 8 A 129 TYR VAL GLU ASP GLN ILE GLU SER VAL THR PHE ASP ARG SEQRES 9 A 129 ILE THR THR GLN THR ALA LYS GLN VAL ILE VAL GLN LYS SEQRES 10 A 129 VAL ARG GLU ALA GLU ARG ALA MET LEU VAL PRO ARG HELIX 1 1 ASN A 2 ALA A 17 1 16 HELIX 2 2 PRO A 19 GLU A 40 1 22 HELIX 3 3 LEU A 77 GLU A 85 1 9 HELIX 4 4 THR A 101 ILE A 105 5 5 HELIX 5 5 THR A 106 ALA A 124 1 19 SHEET 1 A 3 VAL A 45 ASP A 50 0 SHEET 2 A 3 ASP A 55 VAL A 65 -1 O ASP A 55 N ASP A 50 SHEET 3 A 3 GLU A 74 THR A 76 1 O ILE A 75 N VAL A 65 SHEET 1 B 3 VAL A 45 ASP A 50 0 SHEET 2 B 3 ASP A 55 VAL A 65 -1 O ASP A 55 N ASP A 50 SHEET 3 B 3 TYR A 92 GLN A 96 -1 O ASP A 95 N ARG A 60 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1