HEADER VIRAL PROTEIN 26-APR-10 2KX4 TITLE SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPFII COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAIL ATTACHMENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MINOR CAPSID PROTEIN FII; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: FII; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS GPFII, CONNECTOR PROTEIN, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS, OCSP, VIRAL KEYWDS 3 PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR K.L.MAXWELL,L.CARDARELLI,P.NEUDECKER,A.R.DAVIDSON,ONTARIO CENTRE FOR AUTHOR 2 STRUCTURAL PROTEOMICS (OCSP) REVDAT 3 01-MAY-24 2KX4 1 REMARK REVDAT 2 25-AUG-10 2KX4 1 JRNL REVDAT 1 28-JUL-10 2KX4 0 JRNL AUTH L.CARDARELLI,L.G.PELL,P.NEUDECKER,N.PIRANI,A.LIU,L.A.BAKER, JRNL AUTH 2 J.L.RUBINSTEIN,K.L.MAXWELL,A.R.DAVIDSON JRNL TITL PHAGES HAVE ADAPTED THE SAME PROTEIN FOLD TO FULFILL JRNL TITL 2 MULTIPLE FUNCTIONS IN VIRION ASSEMBLY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 14384 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20660769 JRNL DOI 10.1073/PNAS.1005822107 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KX4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000101682. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5 MM [U-100% 13C; U-100% 15N] REMARK 210 GPFII, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 7 -176.87 -171.81 REMARK 500 1 ILE A 12 -153.68 -132.68 REMARK 500 1 MET A 23 -55.80 -134.37 REMARK 500 1 GLN A 34 94.64 -174.44 REMARK 500 1 GLU A 47 103.97 -169.74 REMARK 500 1 ALA A 52 -75.79 -125.96 REMARK 500 1 PRO A 63 -178.46 -69.76 REMARK 500 1 GLU A 85 -81.31 -117.94 REMARK 500 1 ASP A 91 -71.00 -62.71 REMARK 500 1 ASP A 97 134.64 177.96 REMARK 500 2 ILE A 12 -74.99 -54.30 REMARK 500 2 ARG A 14 105.00 -55.02 REMARK 500 2 ILE A 19 110.86 -160.38 REMARK 500 2 MET A 23 -172.19 -61.11 REMARK 500 2 GLN A 34 94.63 -174.06 REMARK 500 2 ASN A 48 88.79 -69.88 REMARK 500 2 ILE A 49 136.99 -173.20 REMARK 500 2 TYR A 51 -74.34 -66.88 REMARK 500 2 ALA A 52 -179.85 -178.04 REMARK 500 2 PRO A 63 -179.25 -69.76 REMARK 500 2 LEU A 75 -165.29 -119.23 REMARK 500 2 GLU A 85 -80.68 -119.77 REMARK 500 2 ASP A 97 92.46 179.04 REMARK 500 3 ALA A 2 -178.66 -174.10 REMARK 500 3 ASP A 16 -171.49 -62.00 REMARK 500 3 ARG A 20 -179.08 -176.83 REMARK 500 3 TYR A 22 -169.65 -164.08 REMARK 500 3 GLN A 34 94.84 -174.68 REMARK 500 3 GLU A 47 95.92 -161.76 REMARK 500 3 ASN A 48 106.84 -52.47 REMARK 500 3 VAL A 58 63.16 64.31 REMARK 500 3 GLU A 59 147.51 -170.37 REMARK 500 3 PRO A 63 -178.00 -69.78 REMARK 500 3 LEU A 75 -168.73 -113.03 REMARK 500 3 GLU A 85 -83.18 -115.54 REMARK 500 3 ASP A 91 -72.35 -63.24 REMARK 500 3 SER A 100 71.31 -151.61 REMARK 500 4 ALA A 13 124.63 -171.32 REMARK 500 4 TYR A 22 -53.39 -136.16 REMARK 500 4 GLN A 34 93.50 -174.10 REMARK 500 4 GLU A 47 105.91 -178.86 REMARK 500 4 ASN A 48 105.35 -51.86 REMARK 500 4 ALA A 52 -74.48 -123.46 REMARK 500 4 ARG A 57 170.66 -57.68 REMARK 500 4 GLU A 59 -75.18 -80.27 REMARK 500 4 LEU A 75 -166.64 -116.25 REMARK 500 4 GLU A 85 -81.83 -103.07 REMARK 500 4 PRO A 95 -176.15 -69.76 REMARK 500 4 ASP A 97 117.65 177.70 REMARK 500 5 LEU A 7 -67.63 -127.15 REMARK 500 REMARK 500 THIS ENTRY HAS 126 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2KX4 A 1 117 UNP P03714 VCF2_LAMBD 1 117 SEQRES 1 A 117 MET ALA ASP PHE ASP ASN LEU PHE ASP ALA ALA ILE ALA SEQRES 2 A 117 ARG ALA ASP GLU THR ILE ARG GLY TYR MET GLY THR SER SEQRES 3 A 117 ALA THR ILE THR SER GLY GLU GLN SER GLY ALA VAL ILE SEQRES 4 A 117 ARG GLY VAL PHE ASP ASP PRO GLU ASN ILE SER TYR ALA SEQRES 5 A 117 GLY GLN GLY VAL ARG VAL GLU GLY SER SER PRO SER LEU SEQRES 6 A 117 PHE VAL ARG THR ASP GLU VAL ARG GLN LEU ARG ARG GLY SEQRES 7 A 117 ASP THR LEU THR ILE GLY GLU GLU ASN PHE TRP VAL ASP SEQRES 8 A 117 ARG VAL SER PRO ASP ASP GLY GLY SER CYS HIS LEU TRP SEQRES 9 A 117 LEU GLY ARG GLY VAL PRO PRO ALA VAL ASN ARG ARG ARG HELIX 1 1 ARG A 68 GLN A 74 1 7 SHEET 1 A 3 THR A 28 ILE A 29 0 SHEET 2 A 3 THR A 80 THR A 82 -1 O THR A 82 N THR A 28 SHEET 3 A 3 ASN A 87 TRP A 89 -1 O PHE A 88 N LEU A 81 SHEET 1 B 3 PHE A 43 ASP A 44 0 SHEET 2 B 3 SER A 64 VAL A 67 -1 O SER A 64 N ASP A 44 SHEET 3 B 3 CYS A 101 TRP A 104 -1 O CYS A 101 N VAL A 67 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1