HEADER PROTEIN BINDING 12-MAY-10 2KXS TITLE ZO1 ZU5 DOMAIN IN COMPLEX WITH GRINL1A PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TIGHT JUNCTION PROTEIN ZO-1,MYOCARDIAL ZONULA ADHERENS COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: TIGHT JUNCTION PROTEIN 1,ZONA OCCLUDENS PROTEIN 1,ZONULA COMPND 6 OCCLUDENS PROTEIN 1,GRINL1A UPSTREAM PROTEIN,GUP; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: CHIMERA OF RESIDUES 1631 TO 1748 OF TIGHT JUNCTION COMPND 9 PROTEIN ZO-1 AND RESIDUES 70-79 OF MYOCARDIUM-ENRICHED ZO-ASSOCIATED COMPND 10 PROTEIN FROM HUMAN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TJP1, ZO1, MYZAP, MYOZAP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS BETA-BARREL, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.WEN,M.ZHANG REVDAT 2 10-APR-24 2KXS 1 COMPND SOURCE DBREF SEQADV REVDAT 1 30-MAR-11 2KXS 0 JRNL AUTH L.HUO,W.WEN,R.WANG,C.KAM,J.XIA,W.FENG,M.ZHANG JRNL TITL CDC42-DEPENDENT FORMATION OF THE ZO-1/MRCKB COMPLEX AT THE JRNL TITL 2 LEADING EDGE CONTROLS CELL MIGRATION JRNL REF EMBO J. V. 30 665 2011 JRNL REFN ISSN 0261-4189 JRNL PMID 21240187 JRNL DOI 10.1038/EMBOJ.2010.353 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KXS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000101706. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 15N] PROTEIN-1, 1 REMARK 210 MM DTT-2, 50 MM TRIS-3, 1 MM REMARK 210 EDTA-4, 90% H2O/10% D2O; 1 MM [U- REMARK 210 100% 13C; U-100% 15N] PROTEIN-5, REMARK 210 50 MM [U-100% 2H] TRIS-6, 1 MM REMARK 210 [U-100% 2H] DTT-7, 1 MM EDTA-8, REMARK 210 100% D2O; 1 MM [U-100% 13C; U- REMARK 210 100% 15N] PROTEIN-9, 1 MM DTT-10, REMARK 210 50 MM TRIS-11, 1 MM EDTA-12, 90% REMARK 210 H2O/10% D2O; 1 MM PROTEIN-13, 1 REMARK 210 MM [U-100% 2H] DTT-14, 50 MM [U- REMARK 210 100% 2H] TRIS-15, 1 MM EDTA-16, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCACB; 3D CBCA(CO)NH; 2D 1H- REMARK 210 1H NOESY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 12 -166.64 -77.04 REMARK 500 1 THR A 36 -41.71 -130.68 REMARK 500 1 GLN A 44 92.15 -56.64 REMARK 500 1 ASN A 63 -46.57 -147.77 REMARK 500 1 SER A 64 63.36 -104.42 REMARK 500 1 LEU A 66 77.51 -108.66 REMARK 500 1 LEU A 69 177.10 -58.48 REMARK 500 1 THR A 76 -168.88 -179.11 REMARK 500 1 GLN A 108 16.52 -144.91 REMARK 500 1 CYS A 111 111.30 82.85 REMARK 500 1 ASP A 115 59.44 -165.72 REMARK 500 1 TYR A 118 -79.97 -49.30 REMARK 500 1 VAL A 138 87.75 -61.60 REMARK 500 2 PRO A 12 -167.62 -71.09 REMARK 500 2 THR A 36 -40.82 -134.11 REMARK 500 2 GLN A 44 91.63 -58.98 REMARK 500 2 SER A 64 42.13 -145.80 REMARK 500 2 LEU A 66 78.88 -110.25 REMARK 500 2 LEU A 69 177.46 -58.40 REMARK 500 2 THR A 76 -176.31 -178.12 REMARK 500 2 CYS A 111 111.02 88.15 REMARK 500 2 ASP A 115 62.71 -163.78 REMARK 500 2 TYR A 118 -79.55 -49.10 REMARK 500 2 ALA A 122 -71.73 -77.42 REMARK 500 2 VAL A 138 98.65 -61.08 REMARK 500 3 SER A 2 -168.56 -102.20 REMARK 500 3 PRO A 12 -167.82 -69.19 REMARK 500 3 THR A 36 -40.34 -133.81 REMARK 500 3 GLN A 44 89.97 -58.01 REMARK 500 3 LEU A 66 78.89 -108.27 REMARK 500 3 LEU A 69 177.39 -58.42 REMARK 500 3 THR A 76 -172.90 -177.26 REMARK 500 3 CYS A 111 112.38 82.07 REMARK 500 3 ASP A 115 57.64 -148.67 REMARK 500 3 LEU A 119 18.57 -167.29 REMARK 500 3 ASN A 123 42.58 -91.16 REMARK 500 3 SER A 136 19.61 59.89 REMARK 500 4 PRO A 12 -156.82 -59.14 REMARK 500 4 THR A 36 -39.90 -134.00 REMARK 500 4 GLN A 44 93.54 -58.35 REMARK 500 4 ASN A 63 -89.80 -146.33 REMARK 500 4 SER A 64 67.32 -68.08 REMARK 500 4 LEU A 66 76.40 -109.74 REMARK 500 4 LEU A 69 177.47 -58.48 REMARK 500 4 THR A 76 -169.64 -178.05 REMARK 500 4 CYS A 111 107.94 85.03 REMARK 500 4 ASP A 115 60.91 -155.42 REMARK 500 4 TYR A 118 -79.77 -49.03 REMARK 500 5 PRO A 12 -157.01 -58.95 REMARK 500 5 THR A 36 -40.79 -134.18 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KXR RELATED DB: PDB REMARK 900 ZO1 ZU5 DOMAIN MC/AA MUTATION DBREF 2KXS A 15 132 UNP Q07157 ZO1_HUMAN 1631 1748 DBREF 2KXS A 137 146 UNP P0CAP1 MYZAP_HUMAN 70 79 SEQADV 2KXS HIS A 1 UNP Q07157 EXPRESSION TAG SEQADV 2KXS SER A 2 UNP Q07157 EXPRESSION TAG SEQADV 2KXS SER A 3 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLY A 4 UNP Q07157 EXPRESSION TAG SEQADV 2KXS LEU A 5 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLU A 6 UNP Q07157 EXPRESSION TAG SEQADV 2KXS VAL A 7 UNP Q07157 EXPRESSION TAG SEQADV 2KXS LEU A 8 UNP Q07157 EXPRESSION TAG SEQADV 2KXS PHE A 9 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLN A 10 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLY A 11 UNP Q07157 EXPRESSION TAG SEQADV 2KXS PRO A 12 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLY A 13 UNP Q07157 EXPRESSION TAG SEQADV 2KXS SER A 14 UNP Q07157 EXPRESSION TAG SEQADV 2KXS GLY A 133 UNP Q07157 LINKER SEQADV 2KXS SER A 134 UNP Q07157 LINKER SEQADV 2KXS GLY A 135 UNP Q07157 LINKER SEQADV 2KXS SER A 136 UNP Q07157 LINKER SEQRES 1 A 146 HIS SER SER GLY LEU GLU VAL LEU PHE GLN GLY PRO GLY SEQRES 2 A 146 SER THR VAL VAL ALA THR ALA ARG GLY ILE PHE ASN SER SEQRES 3 A 146 ASN GLY GLY VAL LEU SER SER ILE GLU THR GLY VAL SER SEQRES 4 A 146 ILE ILE ILE PRO GLN GLY ALA ILE PRO GLU GLY VAL GLU SEQRES 5 A 146 GLN GLU ILE TYR PHE LYS VAL CYS ARG ASP ASN SER ILE SEQRES 6 A 146 LEU PRO PRO LEU ASP LYS GLU LYS GLY GLU THR LEU LEU SEQRES 7 A 146 SER PRO LEU VAL MET CYS GLY PRO HIS GLY LEU LYS PHE SEQRES 8 A 146 LEU LYS PRO VAL GLU LEU ARG LEU PRO HIS CYS ASP PRO SEQRES 9 A 146 LYS THR TRP GLN ASN LYS CYS LEU PRO GLY ASP PRO ASN SEQRES 10 A 146 TYR LEU VAL GLY ALA ASN CYS VAL SER VAL LEU ILE ASP SEQRES 11 A 146 HIS PHE GLY SER GLY SER GLY VAL VAL TYR GLY VAL VAL SEQRES 12 A 146 ARG ARG SER HELIX 1 1 ASP A 103 GLN A 108 5 6 SHEET 1 A 5 SER A 3 PHE A 9 0 SHEET 2 A 5 VAL A 138 ARG A 144 -1 O VAL A 143 N GLY A 4 SHEET 3 A 5 VAL A 82 CYS A 84 -1 N VAL A 82 O TYR A 140 SHEET 4 A 5 GLN A 53 CYS A 60 -1 N LYS A 58 O MET A 83 SHEET 5 A 5 VAL A 16 PHE A 24 -1 N ALA A 20 O PHE A 57 SHEET 1 B 4 GLY A 29 SER A 32 0 SHEET 2 B 4 SER A 39 ILE A 42 -1 O ILE A 42 N GLY A 29 SHEET 3 B 4 LEU A 89 LEU A 99 -1 O GLU A 96 N ILE A 41 SHEET 4 B 4 VAL A 125 PHE A 132 -1 O ASP A 130 N PHE A 91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1