HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JUN-10 2L0C TITLE SOLUTION NMR STRUCTURE OF PROTEIN STY4237 (RESIDUES 36-120) FROM TITLE 2 SALMONELLA ENTERICA, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TITLE 3 SLR115 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MEMBRANE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 36-123; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHI; SOURCE 4 ORGANISM_TAXID: 90370; SOURCE 5 GENE: STY4237, T3948; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET21-23C KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.R.CORT,D.LEE,C.CICCOSANTI,H.JANJUA,T.B.ACTON,R.XIAO,J.K.EVERETT, AUTHOR 2 G.T.MONTELIONE,T.A.RAMELOT,M.A.KENNEDY,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 14-JUN-23 2L0C 1 REMARK REVDAT 3 05-FEB-20 2L0C 1 REMARK SEQADV REVDAT 2 01-SEP-10 2L0C 1 HEADER KEYWDS REMARK REVDAT 1 25-AUG-10 2L0C 0 JRNL AUTH J.CORT,D.LEE,C.CICCOSANTI,H.JANJUA,T.B.ACTON,R.XIAO, JRNL AUTH 2 J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF PROTEIN STY4237 (RESIDUES 36-120) JRNL TITL 2 FROM SALMONELLA ENTERICA, NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET SLR115 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA 3.0, AUTOSTRUCTURE 2.1, XPLOR-NIH, REMARK 3 AUTOSTRUCTURE 2.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE), SCHWIETERS, KUSZEWSKI, TJANDRA REMARK 3 AND CLORE (XPLOR-NIH), HUANG, TEJERO, POWERS AND REMARK 3 MONTELIONE (AUTOSTRUCTURE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000101796. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.1 MM [U-100% 13C; U-100% 15N] REMARK 210 SLR115, 100 MM NACL, 20 MM MES, REMARK 210 5 MM CACL2, 0.05 % NAN3, 10 MM REMARK 210 DTT, 95% H2O/5% D2O; 1.1 MM [U- REMARK 210 100% 13C; U-100% 15N] SLR115, REMARK 210 100 MM NACL, 20 MM MES, 5 MM REMARK 210 CACL2, 0.05 % NAN3, 100% D2O; REMARK 210 1.1 MM [5% 13C; U-100% 15N] REMARK 210 SLR115, 100 MM NACL, 20 MM MES, REMARK 210 5 MM CACL2, 0.05 % NAN3, 95% H2O/ REMARK 210 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D 1H-13C AROM NOESY; 3D REMARK 210 1H-13C ALIPH NOESY; 3D 1H-15N REMARK 210 NOESY; HCCH-TOCSY; 3D HBHA(CO)NH; REMARK 210 3D C(CO)NH; 4D 1H-13C-13C-1H REMARK 210 HMQC NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA 3.0, AUTOSTRUCTURE REMARK 210 2.1, AUTOASSIGN 2.1, NMRPIPE, REMARK 210 XEASY, TOPSPIN, VNMRJ, PINE, REMARK 210 SPARKY, TALOS+, PALES, REDCAT REMARK 210 METHOD USED : MOLECULAR DYNAMICS AND SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 67 HG SER A 83 1.58 REMARK 500 OE2 GLU A 91 HE2 HIS A 95 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 29 -75.56 -64.35 REMARK 500 1 SER A 30 81.64 49.19 REMARK 500 2 THR A 34 144.08 -170.84 REMARK 500 4 ARG A 23 -88.42 -134.37 REMARK 500 4 SER A 24 166.29 178.21 REMARK 500 4 SER A 30 82.65 65.54 REMARK 500 4 ALA A 32 -45.84 71.28 REMARK 500 4 LEU A 49 98.54 64.67 REMARK 500 4 VAL A 79 -62.51 -99.71 REMARK 500 5 ARG A 22 -161.54 -119.71 REMARK 500 5 VAL A 29 74.99 -105.14 REMARK 500 5 MET A 36 99.22 -66.22 REMARK 500 5 GLU A 89 -50.95 74.48 REMARK 500 6 SER A 30 89.82 59.05 REMARK 500 6 PRO A 31 31.78 -76.85 REMARK 500 6 SER A 83 -70.42 -54.34 REMARK 500 6 ARG A 84 16.81 -162.21 REMARK 500 7 ALA A 32 14.84 -160.22 REMARK 500 7 HIS A 94 -64.59 -108.31 REMARK 500 8 ASN A 13 -176.36 -171.75 REMARK 500 8 GLU A 28 93.31 65.05 REMARK 500 8 SER A 30 94.41 63.31 REMARK 500 8 PRO A 31 99.87 -60.02 REMARK 500 8 SER A 35 93.19 -68.99 REMARK 500 8 LEU A 63 97.50 -67.24 REMARK 500 8 PRO A 86 32.20 -86.86 REMARK 500 8 ASN A 88 32.91 -82.65 REMARK 500 9 ASN A 20 78.99 63.44 REMARK 500 9 SER A 35 -152.93 -92.92 REMARK 500 9 THR A 85 84.35 49.01 REMARK 500 9 HIS A 92 36.89 -82.13 REMARK 500 9 HIS A 94 -22.26 76.34 REMARK 500 10 GLN A 27 96.78 63.55 REMARK 500 10 SER A 30 87.12 65.86 REMARK 500 10 PRO A 31 25.07 -73.89 REMARK 500 10 THR A 34 -155.84 -168.86 REMARK 500 10 GLU A 91 91.18 58.17 REMARK 500 11 ASP A 21 -60.05 -104.29 REMARK 500 11 ARG A 22 -76.64 -135.47 REMARK 500 11 ARG A 23 95.76 -173.18 REMARK 500 11 VAL A 29 -44.60 77.21 REMARK 500 11 GLU A 89 53.52 77.97 REMARK 500 12 SER A 30 81.29 57.63 REMARK 500 12 ARG A 84 101.48 -59.80 REMARK 500 13 ALA A 2 86.78 60.53 REMARK 500 13 VAL A 19 -73.74 -73.20 REMARK 500 13 ALA A 32 92.98 -166.60 REMARK 500 13 HIS A 93 -94.07 47.31 REMARK 500 14 ASP A 21 94.35 -68.78 REMARK 500 14 ARG A 25 163.02 71.92 REMARK 500 REMARK 500 THIS ENTRY HAS 80 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SLR115 RELATED DB: TARGETDB REMARK 900 RELATED ID: 17038 RELATED DB: BMRB DBREF 2L0C A 2 89 UNP Q8Z254 Q8Z254_SALTI 36 123 SEQADV 2L0C MET A 1 UNP Q8Z254 INITIATING METHIONINE SEQADV 2L0C LEU A 90 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C GLU A 91 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 92 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 93 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 94 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 95 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 96 UNP Q8Z254 EXPRESSION TAG SEQADV 2L0C HIS A 97 UNP Q8Z254 EXPRESSION TAG SEQRES 1 A 97 MET ALA PRO LEU GLN GLN LYS GLN VAL VAL VAL SER ASN SEQRES 2 A 97 LYS ARG GLU LYS PRO VAL ASN ASP ARG ARG SER ARG GLN SEQRES 3 A 97 GLN GLU VAL SER PRO ALA GLY THR SER MET ARG TYR GLU SEQRES 4 A 97 ALA SER PHE LYS PRO LEU ASN GLY GLY LEU GLU LYS THR SEQRES 5 A 97 PHE ARG LEU GLN ALA GLN GLN TYR HIS ALA LEU THR VAL SEQRES 6 A 97 GLY ASP GLN GLY THR LEU SER TYR LYS GLY THR ARG PHE SEQRES 7 A 97 VAL GLY PHE VAL SER ARG THR PRO ASP ASN GLU LEU GLU SEQRES 8 A 97 HIS HIS HIS HIS HIS HIS HELIX 1 1 ASP A 21 ARG A 25 5 5 HELIX 2 2 GLN A 56 HIS A 61 1 6 HELIX 3 3 PRO A 86 LEU A 90 5 5 SHEET 1 A 5 LYS A 51 ARG A 54 0 SHEET 2 A 5 GLU A 39 PRO A 44 -1 N PHE A 42 O LYS A 51 SHEET 3 A 5 GLN A 5 ARG A 15 -1 N VAL A 10 O LYS A 43 SHEET 4 A 5 GLY A 69 LYS A 74 -1 O GLY A 69 N VAL A 9 SHEET 5 A 5 ARG A 77 VAL A 82 -1 O VAL A 82 N THR A 70 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1