HEADER CELL ADHESION 30-JUN-10 2L0D TITLE SOLUTION NMR STRUCTURE OF PUTATIVE CELL SURFACE PROTEIN MA_4588 (272- TITLE 2 376 DOMAIN) FROM METHANOSARCINA ACETIVORANS, NORTHEAST STRUCTURAL TITLE 3 GENOMICS CONSORTIUM TARGET MVR254A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL SURFACE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 272-376; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA ACETIVORANS; SOURCE 3 ORGANISM_TAXID: 2214; SOURCE 4 GENE: MA_4588; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET21-23C KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.R.CORT,D.LEE,C.CICCOSANTI,H.JANJUA,T.B.ACTON,R.XIAO,J.K.EVERETT, AUTHOR 2 G.T.MONTELIONE,T.A.RAMELOT,M.A.KENNEDY,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 5 15-MAY-24 2L0D 1 REMARK REVDAT 4 14-JUN-23 2L0D 1 REMARK REVDAT 3 05-FEB-20 2L0D 1 REMARK SEQADV REVDAT 2 01-SEP-10 2L0D 1 REMARK REVDAT 1 25-AUG-10 2L0D 0 JRNL AUTH J.CORT,D.LEE,C.CICCOSANTI,H.JANJUA,T.B.ACTON,R.XIAO, JRNL AUTH 2 J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF PUTATIVE CELL SURFACE PROTEIN JRNL TITL 2 MA_4588 (272-376 DOMAIN) FROM METHANOSARCINA ACETIVORANS, JRNL TITL 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MVR254A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA 3.0, AUTOSTRUCTURE 2.1, XPLOR-NIH REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE), SCHWIETERS, KUSZEWSKI, TJANDRA REMARK 3 AND CLORE (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000101797. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.1 MM [U-100% 13C; U-100% 15N] REMARK 210 MVR254A, 100 MM NACL, 20 MM MES, REMARK 210 5 MM CACL2, 0.05 % NAN3, 95% H2O/ REMARK 210 5% D2O; 1.1 MM [U-100% 13C; U- REMARK 210 100% 15N] MVR254A, 100 MM NACL, REMARK 210 20 MM MES, 5 MM CACL2, 0.05 % REMARK 210 NAN3, 100% D2O; 1.1 MM [5% REMARK 210 BIOSYNTHETICALLY-DIRECTED 13C; U- REMARK 210 100% 15N] MVR254A, 100 MM NACL, REMARK 210 20 MM MES, 5 MM CACL2, 0.05 % REMARK 210 NAN3, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D 1H-13C AROM NOESY; 3D REMARK 210 1H-13C ALIPH NOESY; 3D 1H-15N REMARK 210 NOESY; 4D 1H-13C-13C-1H HMQC- REMARK 210 NOESY-HMQC; 3D HBHA(CO)NH; 3D REMARK 210 HCCH-TOCSY; 3D C(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA 3.0, AUTOSTRUCTURE REMARK 210 2.1, AUTOASSIGN 2.1, NMRPIPE, REMARK 210 XEASY, TOPSPIN, VNMRJ, PINE, REMARK 210 SPARKY, TALOS+, PALES, REDCAT REMARK 210 METHOD USED : MOLECULAR DYNAMICS AND SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 4 79.94 -103.16 REMARK 500 1 GLN A 30 43.99 -87.11 REMARK 500 1 ASP A 85 82.61 51.76 REMARK 500 2 GLN A 30 57.15 -95.51 REMARK 500 2 ASP A 45 -75.02 67.98 REMARK 500 2 SER A 56 130.86 -176.87 REMARK 500 2 ASP A 72 -53.90 77.52 REMARK 500 2 ASP A 85 85.25 61.61 REMARK 500 2 ASN A 88 71.89 48.04 REMARK 500 3 PRO A 17 49.56 -80.30 REMARK 500 3 THR A 19 -167.90 -167.98 REMARK 500 3 GLN A 30 53.85 -96.22 REMARK 500 3 ASN A 32 46.73 -86.93 REMARK 500 3 THR A 36 -148.57 -84.30 REMARK 500 3 ASP A 45 -62.89 70.81 REMARK 500 3 ASP A 85 88.30 58.94 REMARK 500 3 GLU A 95 96.23 -58.40 REMARK 500 3 SER A 96 -26.36 173.35 REMARK 500 4 GLN A 30 52.36 -104.89 REMARK 500 4 ASP A 45 -51.06 70.90 REMARK 500 4 SER A 56 136.87 -178.10 REMARK 500 4 ASP A 85 85.87 64.91 REMARK 500 4 ASN A 88 64.77 63.02 REMARK 500 4 SER A 96 -40.27 -160.47 REMARK 500 4 HIS A 110 78.99 -117.66 REMARK 500 5 ASP A 45 19.01 58.82 REMARK 500 5 ASP A 85 92.09 48.57 REMARK 500 5 HIS A 113 -26.65 -160.93 REMARK 500 6 GLN A 30 56.62 -101.02 REMARK 500 6 THR A 36 -133.20 -90.14 REMARK 500 6 ASP A 45 -73.95 67.06 REMARK 500 6 ASP A 85 90.37 63.27 REMARK 500 6 GLU A 95 22.96 -74.35 REMARK 500 6 HIS A 113 -83.03 67.83 REMARK 500 7 GLN A 30 40.37 -94.14 REMARK 500 7 ASP A 85 86.85 57.80 REMARK 500 7 HIS A 109 80.48 46.61 REMARK 500 8 PRO A 17 42.09 -83.27 REMARK 500 8 ASN A 18 27.92 -156.72 REMARK 500 8 THR A 19 -177.06 -170.99 REMARK 500 8 GLN A 30 56.73 -99.51 REMARK 500 8 THR A 36 -128.02 -82.41 REMARK 500 8 ASP A 85 92.67 62.38 REMARK 500 9 PRO A 17 31.27 -73.59 REMARK 500 9 GLN A 30 54.30 -103.39 REMARK 500 9 ASN A 32 45.41 -91.09 REMARK 500 9 ASP A 85 95.49 62.89 REMARK 500 9 ASN A 94 96.52 -68.40 REMARK 500 9 SER A 96 25.46 -179.29 REMARK 500 9 ASN A 98 0.34 -68.88 REMARK 500 REMARK 500 THIS ENTRY HAS 114 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MVR254A RELATED DB: TARGETDB REMARK 900 RELATED ID: 17039 RELATED DB: BMRB DBREF 2L0D A 2 106 UNP Q8THC9 Q8THC9_METAC 272 376 SEQADV 2L0D MET A 1 UNP Q8THC9 INITIATING METHIONINE SEQADV 2L0D LEU A 107 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D GLU A 108 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 109 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 110 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 111 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 112 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 113 UNP Q8THC9 EXPRESSION TAG SEQADV 2L0D HIS A 114 UNP Q8THC9 EXPRESSION TAG SEQRES 1 A 114 MET ILE PRO ASP LEU VAL PRO VAL SER LEU THR PRO VAL SEQRES 2 A 114 THR VAL VAL PRO ASN THR VAL ASN THR MET THR ALA THR SEQRES 3 A 114 ILE GLU ASN GLN GLY ASN LYS ASP SER THR SER PHE ASN SEQRES 4 A 114 VAL SER LEU LEU VAL ASP GLY ILE VAL VAL ASP THR GLN SEQRES 5 A 114 THR VAL THR SER LEU GLU SER GLU ASN SER THR ASN VAL SEQRES 6 A 114 ASP PHE HIS TRP THR LEU ASP GLY THR ALA ASN SER TYR SEQRES 7 A 114 THR LEU THR VAL ASN VAL ASP PRO GLU ASN ALA VAL ASN SEQRES 8 A 114 GLU GLY ASN GLU SER ASN ASN THR LEU THR ALA LEU VAL SEQRES 9 A 114 GLY THR LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 ASN A 94 ASN A 97 5 4 SHEET 1 A 3 LEU A 5 THR A 11 0 SHEET 2 A 3 VAL A 20 ASN A 29 -1 O THR A 24 N THR A 11 SHEET 3 A 3 SER A 62 THR A 70 -1 O VAL A 65 N ALA A 25 SHEET 1 B 5 THR A 14 VAL A 15 0 SHEET 2 B 5 THR A 99 THR A 106 1 O GLY A 105 N VAL A 15 SHEET 3 B 5 SER A 77 VAL A 84 -1 N TYR A 78 O VAL A 104 SHEET 4 B 5 PHE A 38 VAL A 44 -1 N LEU A 43 O THR A 81 SHEET 5 B 5 ILE A 47 VAL A 54 -1 O GLN A 52 N VAL A 40 CISPEP 1 THR A 11 PRO A 12 1 -0.79 CISPEP 2 THR A 11 PRO A 12 2 1.92 CISPEP 3 THR A 11 PRO A 12 3 -0.68 CISPEP 4 THR A 11 PRO A 12 4 2.54 CISPEP 5 THR A 11 PRO A 12 5 3.13 CISPEP 6 THR A 11 PRO A 12 6 1.21 CISPEP 7 THR A 11 PRO A 12 7 -2.63 CISPEP 8 THR A 11 PRO A 12 8 0.61 CISPEP 9 THR A 11 PRO A 12 9 -2.73 CISPEP 10 THR A 11 PRO A 12 10 -2.36 CISPEP 11 THR A 11 PRO A 12 11 -0.01 CISPEP 12 THR A 11 PRO A 12 12 -1.56 CISPEP 13 THR A 11 PRO A 12 13 8.72 CISPEP 14 THR A 11 PRO A 12 14 1.72 CISPEP 15 THR A 11 PRO A 12 15 -2.69 CISPEP 16 THR A 11 PRO A 12 16 -3.56 CISPEP 17 THR A 11 PRO A 12 17 -3.36 CISPEP 18 THR A 11 PRO A 12 18 1.77 CISPEP 19 THR A 11 PRO A 12 19 -3.54 CISPEP 20 THR A 11 PRO A 12 20 5.11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1