HEADER ACTIN BINDING PROTEIN 27-JUL-10 2L1A TITLE SOLUTION NMR STRUCTURE OF THE N-TERMINAL GTPASE-LIKE DOMAIN OF TITLE 2 DICTYOSTELIUM DISCOIDEUM FOMIN C COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMIN-C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL POTENTIAL GTPASE-BINDING DOMAIN, RESIDUES 1-100; COMPND 5 SYNONYM: @; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_COMMON: SLIME MOLD; SOURCE 4 ORGANISM_TAXID: 44689; SOURCE 5 GENE: FORC, DDB_G0287295; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 TEV KEYWDS FRUITING BODY FORMATION, ACTIN BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.A.DAMES,A.SCHOENICHEN,G.STEPHAN,M.GEYER REVDAT 3 01-MAY-24 2L1A 1 REMARK REVDAT 2 27-JAN-16 2L1A 1 JRNL REVDAT 1 17-AUG-11 2L1A 0 JRNL AUTH S.A.DAMES,A.JUNEMANN,H.J.SASS,A.SCHONICHEN,B.E.STOPSCHINSKI, JRNL AUTH 2 S.GRZESIEK,J.FAIX,M.GEYER JRNL TITL STRUCTURE, DYNAMICS, LIPID BINDING, AND PHYSIOLOGICAL JRNL TITL 2 RELEVANCE OF THE PUTATIVE GTPASE-BINDING DOMAIN OF JRNL TITL 3 DICTYOSTELIUM FORMIN C. JRNL REF J.BIOL.CHEM. V. 286 36907 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21846933 JRNL DOI 10.1074/JBC.M111.225052 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000101830. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.03 MM [U-100% 15N] FORC/ A, 50 REMARK 210 MM POTASSIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.2 % SODIUM REMARK 210 AZIDE, 95% H2O/5% D2O; 1.03 MM REMARK 210 [U-100% 13C; U-100% 15N] FORC/ A, REMARK 210 50 MM POTASSIUM PHOSPHATE, 50 REMARK 210 MM SODIUM CHLORIDE, 0.2% SODIUM REMARK 210 AZIDE, 95% H2O/5% D2O; 1.03 MM REMARK 210 [U-100% 13C; U-100% 15N] FORC/ A, REMARK 210 50 MM POTASSIUM PHOSPHATE, 50 REMARK 210 MM SODIUM CHLORIDE, 0.2% SODIUM REMARK 210 AZIDE, 100% D2O; 1.03 MM [U-100% REMARK 210 13C; U-100% 15N] FORC/ A, 50 MM REMARK 210 POTASSIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.2 V/V SODIUM REMARK 210 AZIDE, 8.6 W/V C12E5, 2 V/V REMARK 210 HEXANOL, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCA; 3D CCONH-TOCSY; 3D REMARK 210 CBCANH; 3D HNHA; 3D HCCH-TOCSY; REMARK 210 3D HNHB; 3D HACAHB-COSY; 3D HNCO; REMARK 210 2D 13C-{13CO}-1H-13C HSQC; 2D REMARK 210 13C-{15N}-1H-13C HSQC; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC; 2D 1H- REMARK 210 15N HSQC-IPAP; 3D HN(CO)CA_JCAHA; REMARK 210 3D HN(CO)CA_JCACB; {1H}-15N-NOE; REMARK 210 15N-T1; 15N-T2 REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRDRAW, NMRVIEW REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING, FINAL REMARK 210 REFINEMENT IN WATER-SHELL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 GLU A 13 N - CA - CB ANGL. DEV. = 12.0 DEGREES REMARK 500 5 GLU A 13 N - CA - CB ANGL. DEV. = 11.1 DEGREES REMARK 500 10 GLU A 13 N - CA - CB ANGL. DEV. = 10.9 DEGREES REMARK 500 15 GLU A 13 N - CA - CB ANGL. DEV. = 11.1 DEGREES REMARK 500 16 GLU A 13 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 16 76.24 -150.07 REMARK 500 1 THR A 22 -158.92 -137.50 REMARK 500 1 SER A 23 30.77 -82.24 REMARK 500 1 SER A 93 -83.84 -146.62 REMARK 500 2 ASN A 16 67.70 -155.95 REMARK 500 2 HIS A 20 110.48 80.39 REMARK 500 2 THR A 22 -151.79 -132.85 REMARK 500 2 SER A 93 -84.82 -145.20 REMARK 500 2 PRO A 101 109.99 -57.00 REMARK 500 3 ALA A 2 -52.55 70.06 REMARK 500 3 MET A 4 79.56 54.24 REMARK 500 3 THR A 22 -160.29 54.17 REMARK 500 3 PRO A 26 56.92 -92.28 REMARK 500 3 PRO A 29 28.89 -78.99 REMARK 500 3 GLN A 31 -166.00 -67.50 REMARK 500 3 SER A 93 -80.79 -140.67 REMARK 500 4 ASN A 16 83.84 -160.24 REMARK 500 4 LYS A 57 37.23 74.57 REMARK 500 4 VAL A 77 77.54 -104.07 REMARK 500 4 GLU A 78 2.94 -69.40 REMARK 500 4 SER A 93 -80.41 -140.91 REMARK 500 4 ALA A 103 -158.42 -87.36 REMARK 500 5 ALA A 2 -171.37 63.56 REMARK 500 5 THR A 22 -165.76 54.84 REMARK 500 5 GLN A 27 30.62 -80.99 REMARK 500 5 SER A 93 -78.89 -144.76 REMARK 500 5 PRO A 101 107.14 -39.50 REMARK 500 5 ALA A 105 97.55 -162.89 REMARK 500 6 ASN A 16 20.90 -148.80 REMARK 500 6 ARG A 21 -163.49 -110.33 REMARK 500 6 PRO A 26 158.22 -38.93 REMARK 500 6 GLN A 28 163.54 65.35 REMARK 500 6 SER A 93 -85.10 -146.79 REMARK 500 6 HIS A 102 100.95 63.98 REMARK 500 6 ALA A 103 -166.89 -104.88 REMARK 500 7 ASN A 18 27.48 -140.12 REMARK 500 7 PRO A 26 -155.59 -76.31 REMARK 500 7 LYS A 57 38.49 72.02 REMARK 500 7 SER A 93 -80.69 -143.05 REMARK 500 7 PRO A 101 83.17 -67.24 REMARK 500 7 HIS A 102 120.46 59.76 REMARK 500 8 ALA A 2 73.89 53.86 REMARK 500 8 HIS A 3 137.47 -170.10 REMARK 500 8 PRO A 26 25.65 -77.27 REMARK 500 8 PRO A 29 40.23 -77.25 REMARK 500 8 GLN A 30 -67.54 -93.80 REMARK 500 8 PRO A 33 132.80 -37.27 REMARK 500 8 LYS A 57 36.43 70.54 REMARK 500 8 SER A 93 -92.35 -147.74 REMARK 500 9 ALA A 2 -176.83 64.98 REMARK 500 REMARK 500 THIS ENTRY HAS 146 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 86 0.12 SIDE CHAIN REMARK 500 6 ARG A 11 0.08 SIDE CHAIN REMARK 500 7 ARG A 86 0.08 SIDE CHAIN REMARK 500 9 ARG A 86 0.09 SIDE CHAIN REMARK 500 12 ARG A 86 0.09 SIDE CHAIN REMARK 500 14 ARG A 98 0.29 SIDE CHAIN REMARK 500 19 ARG A 86 0.11 SIDE CHAIN REMARK 500 20 ARG A 98 0.18 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 2L1A A 8 107 UNP Q54KF1 FORC_DICDI 1 100 SEQADV 2L1A GLY A 1 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A ALA A 2 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A HIS A 3 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A MET A 4 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A GLY A 5 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A GLY A 6 UNP Q54KF1 EXPRESSION TAG SEQADV 2L1A SER A 7 UNP Q54KF1 EXPRESSION TAG SEQRES 1 A 107 GLY ALA HIS MET GLY GLY SER MET LYS ILE ARG VAL GLU SEQRES 2 A 107 LEU ILE ASN GLY ASN GLU HIS ARG THR SER SER THR PRO SEQRES 3 A 107 GLN GLN PRO GLN GLN ASN PRO SER VAL SER HIS ILE PHE SEQRES 4 A 107 ASP GLY GLU THR ALA VAL LYS ASP HIS ILE LYS VAL LEU SEQRES 5 A 107 LEU THR HIS PHE LYS ILE PRO VAL ASP LYS VAL SER SER SEQRES 6 A 107 TYR ALA LEU GLN ASN PRO PHE THR LEU ALA TYR VAL GLU SEQRES 7 A 107 ASP SER PHE LEU THR PRO GLU ARG LEU VAL GLU ALA GLU SEQRES 8 A 107 LYS SER TYR PHE ILE LEU ARG MET LYS PRO HIS ALA ILE SEQRES 9 A 107 ALA ASP ARG HELIX 1 1 ALA A 44 PHE A 56 1 13 HELIX 2 2 PRO A 59 SER A 64 5 6 HELIX 3 3 THR A 83 LYS A 92 1 10 SHEET 1 A 4 SER A 34 PHE A 39 0 SHEET 2 A 4 MET A 8 LEU A 14 -1 N ILE A 10 O HIS A 37 SHEET 3 A 4 PHE A 95 MET A 99 1 O LEU A 97 N GLU A 13 SHEET 4 A 4 TYR A 66 GLN A 69 -1 N GLN A 69 O ILE A 96 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1