data_2L4K # _entry.id 2L4K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2L4K RCSB RCSB101948 WWPDB D_1000101948 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2QMS PDB 'Ligand-free crystal structure of the Grb7-SH2 domain' unspecified 1MW4 PDB 'Original Grb7-SH2/pY1139 complex solution structure, prior to water refinement' unspecified 5288 BMRB 'Chemical shift data and NMR restraints (Grb7-SH2/pY1139 complex)' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L4K _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-10-07 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pias, S.C.' 1 'Ivancic, M.' 2 'Brescia, P.J.' 3 'Johnson, D.L.' 4 'Smith, D.E.' 5 'Daly, R.J.' 6 'Lyons, B.A.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Water-Refined Solution Structure of the Human Grb7-SH2 Domain in Complex with the erbB2 Receptor Peptide pY1139.' 'Protein Pept.Lett.' 19 832 838 2012 PPELEN NE 0929-8665 2077 ? 22702899 ? 1 'Solution structure of the human Grb7-SH2 domain/erbB2 peptide complex and structural basis for Grb7 binding to ErbB2.' J.Biomol.Nmr 27 205 219 2003 JBNME9 NE 0925-2738 0800 ? 12975581 10.1023/A:1025498409113 2 'Assignment of backbone 1H, 13C, and 15N resonances of human Grb7-SH2 domain in complex with a phosphorylated peptide ligand.' J.Biomol.Nmr 23 77 78 2002 JBNME9 NE 0925-2738 0800 ? 12061724 10.1023/A:1015345302576 3 ? 'To Be Published' ? ? ? ? JBNME9 NE 0925-2738 0800 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pias, S.C.' 1 primary 'Johnson, D.L.' 2 primary 'Smith, D.E.' 3 primary 'Lyons, B.A.' 4 1 'Ivancic, M.' 5 1 'Daly, R.J.' 6 1 'Lyons, B.A.' 7 2 'Brescia, P.J.' 8 2 'Ivancic, M.' 9 2 'Lyons, B.A.' 10 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Growth factor receptor-bound protein 7' 13690.711 1 ? ? 'unp residues 415-532' ? 2 polymer syn 'Receptor tyrosine-protein kinase erbB-2' 1266.205 1 2.7.10.1 ? 'unp residues 1135-1144' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'GRB7 adapter protein, Epidermal growth factor receptor GRB-7, B47' 2 'p185erbB2, Tyrosine kinase-type cell surface receptor HER2, Metastatic lymph node gene 19 protein, MLN 19' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSPASGTSLSAAIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLY FSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTRVAL ; ;GSPASGTSLSAAIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLY FSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTRVAL ; A ? 2 'polypeptide(L)' no yes 'PQPE(PTR)VNQPD' PQPEYVNQPD B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 ALA n 1 5 SER n 1 6 GLY n 1 7 THR n 1 8 SER n 1 9 LEU n 1 10 SER n 1 11 ALA n 1 12 ALA n 1 13 ILE n 1 14 HIS n 1 15 ARG n 1 16 THR n 1 17 GLN n 1 18 LEU n 1 19 TRP n 1 20 PHE n 1 21 HIS n 1 22 GLY n 1 23 ARG n 1 24 ILE n 1 25 SER n 1 26 ARG n 1 27 GLU n 1 28 GLU n 1 29 SER n 1 30 GLN n 1 31 ARG n 1 32 LEU n 1 33 ILE n 1 34 GLY n 1 35 GLN n 1 36 GLN n 1 37 GLY n 1 38 LEU n 1 39 VAL n 1 40 ASP n 1 41 GLY n 1 42 LEU n 1 43 PHE n 1 44 LEU n 1 45 VAL n 1 46 ARG n 1 47 GLU n 1 48 SER n 1 49 GLN n 1 50 ARG n 1 51 ASN n 1 52 PRO n 1 53 GLN n 1 54 GLY n 1 55 PHE n 1 56 VAL n 1 57 LEU n 1 58 SER n 1 59 LEU n 1 60 CYS n 1 61 HIS n 1 62 LEU n 1 63 GLN n 1 64 LYS n 1 65 VAL n 1 66 LYS n 1 67 HIS n 1 68 TYR n 1 69 LEU n 1 70 ILE n 1 71 LEU n 1 72 PRO n 1 73 SER n 1 74 GLU n 1 75 GLU n 1 76 GLU n 1 77 GLY n 1 78 ARG n 1 79 LEU n 1 80 TYR n 1 81 PHE n 1 82 SER n 1 83 MET n 1 84 ASP n 1 85 ASP n 1 86 GLY n 1 87 GLN n 1 88 THR n 1 89 ARG n 1 90 PHE n 1 91 THR n 1 92 ASP n 1 93 LEU n 1 94 LEU n 1 95 GLN n 1 96 LEU n 1 97 VAL n 1 98 GLU n 1 99 PHE n 1 100 HIS n 1 101 GLN n 1 102 LEU n 1 103 ASN n 1 104 ARG n 1 105 GLY n 1 106 ILE n 1 107 LEU n 1 108 PRO n 1 109 CYS n 1 110 LEU n 1 111 LEU n 1 112 ARG n 1 113 HIS n 1 114 CYS n 1 115 CYS n 1 116 THR n 1 117 ARG n 1 118 VAL n 1 119 ALA n 1 120 LEU n 2 1 PRO n 2 2 GLN n 2 3 PRO n 2 4 GLU n 2 5 PTR n 2 6 VAL n 2 7 ASN n 2 8 GLN n 2 9 PRO n 2 10 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GRB7 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP GRB7_HUMAN Q14451 1 ;PASGTSLSAAIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFS MDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCTRVAL ; 415 ? 2 UNP ERBB2_HUMAN P04626 2 PQPEYVNQPD 1135 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2L4K A 3 ? 120 ? Q14451 415 ? 532 ? 3 120 2 2 2L4K B 1 ? 10 ? P04626 1135 ? 1144 ? 1135 1144 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2L4K GLY A 1 ? UNP Q14451 ? ? 'EXPRESSION TAG' 1 1 1 2L4K SER A 2 ? UNP Q14451 ? ? 'EXPRESSION TAG' 2 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D HNCA' 1 2 1 '3D HN(CO)CA' 1 3 1 '3D HNCACB' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '2D 15N HSQC' 1 6 1 'CN NOESY-HSQC' 1 7 1 '3D 15N NOESY-HSQC' 1 8 1 '3D 13C NOESY-HSQC' 1 9 1 '3D TOCSY-HSQC' 1 10 1 '2D HMQC-J' 1 11 1 '3D CBCANH' 1 12 1 '3D HCCH-TOCSY' 1 13 1 '13C, 15N→12C, 14N NOESY' 1 14 1 '12C, 14N→13C, 15N NOESY' 1 15 1 '12C, 14N→12C, 14N NOESY' 1 16 1 '12C, 14N→12C, 14N TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.6 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.6-0.8 mM [U-100% 13C; U-100% 15N] Grb7-SH2 domain-1, 0.6-0.8 mM [U-100% 13C; U-100% 15N] pY1139 peptide-2, 52.2 mM acetic acid-3, 100 mM sodium chloride-4, 5 mM DTT-5, 1 mM EDTA-6, 0.9 mM sodium azide-7, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2L4K _pdbx_nmr_refine.method 'molecular dynamics simulated annealing, simulated annealing' _pdbx_nmr_refine.details ;Refinement with AMBER software, using implicit water (generalized Born model) and ff99SB force field, Structure calculation with CNS software, in vacuum ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy and the fewest restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L4K _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L4K _pdbx_nmr_representative.selection_criteria 'best procheck statistics' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm' refinement AMBER 9 1 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure calculation' CNS 1.1 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2L4K _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L4K _struct.title 'Water refined solution structure of the human Grb7-SH2 domain in complex with the 10 amino acid peptide pY1139' _struct.pdbx_descriptor 'Growth factor receptor-bound protein 7, Receptor tyrosine-protein kinase erbB-2 (E.C.2.7.10.1)' _struct.pdbx_model_details 'best PROCHECK statistics, model 3' _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L4K _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'Grb7, SH2 domain, erbB2 receptor, water refinement, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'THE DIMERIC ANNOTATION IN REMARK 350 REFERS TO THE TWO CHAINS OF THE ASSEMBLY (PROTEIN DOMAIN AND LIGAND)' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 16 ? PHE A 20 ? THR A 16 PHE A 20 5 ? 5 HELX_P HELX_P2 2 SER A 25 ? ILE A 33 ? SER A 25 ILE A 33 1 ? 9 HELX_P HELX_P3 3 GLY A 34 ? GLN A 36 ? GLY A 34 GLN A 36 5 ? 3 HELX_P HELX_P4 4 THR A 91 ? HIS A 100 ? THR A 91 HIS A 100 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B GLU 4 C ? ? ? 1_555 B PTR 5 N ? ? B GLU 1138 B PTR 1139 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? B PTR 5 C ? ? ? 1_555 B VAL 6 N ? ? B PTR 1139 B VAL 1140 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 2 B . ? GLN 1136 B PRO 3 B ? PRO 1137 B 1 -5.64 2 SER 2 A . ? SER 2 A PRO 3 A ? PRO 3 A 4 4.86 3 SER 2 A . ? SER 2 A PRO 3 A ? PRO 3 A 5 -5.88 4 GLN 2 B . ? GLN 1136 B PRO 3 B ? PRO 1137 B 8 -3.38 5 GLN 2 B . ? GLN 1136 B PRO 3 B ? PRO 1137 B 9 -6.62 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 42 ? PHE A 43 ? LEU A 42 PHE A 43 A 2 CYS A 114 ? CYS A 115 ? CYS A 114 CYS A 115 B 1 LEU A 57 ? CYS A 60 ? LEU A 57 CYS A 60 B 2 VAL A 65 ? TYR A 68 ? VAL A 65 TYR A 68 C 1 LEU A 71 ? SER A 73 ? LEU A 71 SER A 73 C 2 LEU A 79 ? TYR A 80 ? LEU A 79 TYR A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 43 ? O PHE A 43 N CYS A 114 ? N CYS A 114 B 1 2 N LEU A 57 ? N LEU A 57 O TYR A 68 ? O TYR A 68 C 1 2 N PRO A 72 ? N PRO A 72 O TYR A 80 ? O TYR A 80 # _atom_sites.entry_id 2L4K _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 HIS 113 113 113 HIS HIS A . n A 1 114 CYS 114 114 114 CYS CYS A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 LEU 120 120 120 LEU LEU A . n B 2 1 PRO 1 1135 1135 PRO PRO B . n B 2 2 GLN 2 1136 1136 GLN GLN B . n B 2 3 PRO 3 1137 1137 PRO PRO B . n B 2 4 GLU 4 1138 1138 GLU GLU B . n B 2 5 PTR 5 1139 1139 PTR PTR B . n B 2 6 VAL 6 1140 1140 VAL VAL B . n B 2 7 ASN 7 1141 1141 ASN ASN B . n B 2 8 GLN 8 1142 1142 GLN GLN B . n B 2 9 PRO 9 1143 1143 PRO PRO B . n B 2 10 ASP 10 1144 1144 ASP ASP B . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id PTR _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id PTR _pdbx_struct_mod_residue.auth_seq_id 1139 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-PHOSPHOTYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-07-25 4 'Structure model' 1 3 2012-10-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Grb7-SH2 domain-1' ? 0.6-0.8 mM '[U-100% 13C; U-100% 15N]' 1 'pY1139 peptide-2' ? 0.6-0.8 mM '[U-100% 13C; U-100% 15N]' 1 'acetic acid-3' 52.2 ? mM ? 1 'sodium chloride-4' 100 ? mM ? 1 DTT-5 5 ? mM ? 1 EDTA-6 1 ? mM ? 1 'sodium azide-7' 0.9 ? mM ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG A SER 25 ? ? O1P B PTR 1139 ? ? 1.47 2 1 HG A SER 48 ? ? O2P B PTR 1139 ? ? 1.58 3 2 HG A SER 25 ? ? O2P B PTR 1139 ? ? 1.52 4 4 HG A SER 25 ? ? O1P B PTR 1139 ? ? 1.54 5 5 HG A SER 48 ? ? O2P B PTR 1139 ? ? 1.47 6 6 HG A SER 48 ? ? O1P B PTR 1139 ? ? 1.60 7 7 HG A SER 25 ? ? O3P B PTR 1139 ? ? 1.52 8 9 HG A SER 48 ? ? O2P B PTR 1139 ? ? 1.56 9 10 HG A SER 48 ? ? O1P B PTR 1139 ? ? 1.52 10 10 HG A SER 25 ? ? O3P B PTR 1139 ? ? 1.56 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.354 1.252 0.102 0.011 N 2 1 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.357 1.252 0.105 0.011 N 3 2 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.359 1.252 0.107 0.011 N 4 2 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.351 1.252 0.099 0.011 N 5 3 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.354 1.252 0.102 0.011 N 6 3 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.360 1.252 0.108 0.011 N 7 4 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.350 1.252 0.098 0.011 N 8 4 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.359 1.252 0.107 0.011 N 9 5 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.361 1.252 0.109 0.011 N 10 5 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.359 1.252 0.107 0.011 N 11 6 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.359 1.252 0.107 0.011 N 12 6 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.353 1.252 0.101 0.011 N 13 7 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.359 1.252 0.107 0.011 N 14 7 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.359 1.252 0.107 0.011 N 15 8 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.351 1.252 0.099 0.011 N 16 8 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.360 1.252 0.108 0.011 N 17 9 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.353 1.252 0.101 0.011 N 18 9 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.353 1.252 0.101 0.011 N 19 10 CD A GLU 47 ? ? OE2 A GLU 47 ? ? 1.352 1.252 0.100 0.011 N 20 10 CD A GLU 74 ? ? OE2 A GLU 74 ? ? 1.359 1.252 0.107 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.87 120.30 6.57 0.50 N 2 1 CB A TYR 68 ? ? CG A TYR 68 ? ? CD2 A TYR 68 ? ? 115.76 121.00 -5.24 0.60 N 3 1 NE A ARG 89 ? ? CZ A ARG 89 ? ? NH1 A ARG 89 ? ? 123.50 120.30 3.20 0.50 N 4 1 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH1 A ARG 104 ? ? 123.84 120.30 3.54 0.50 N 5 1 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.82 111.50 -8.68 1.40 N 6 1 C B VAL 1140 ? ? N B ASN 1141 ? ? CA B ASN 1141 ? ? 139.29 121.70 17.59 2.50 Y 7 1 CB B ASN 1141 ? ? CA B ASN 1141 ? ? C B ASN 1141 ? ? 127.98 110.40 17.58 2.00 N 8 1 N B ASN 1141 ? ? CA B ASN 1141 ? ? C B ASN 1141 ? ? 92.80 111.00 -18.20 2.70 N 9 2 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 123.63 120.30 3.33 0.50 N 10 2 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.83 120.30 6.53 0.50 N 11 2 NE A ARG 89 ? ? CZ A ARG 89 ? ? NH1 A ARG 89 ? ? 123.36 120.30 3.06 0.50 N 12 2 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.32 111.50 -9.18 1.40 N 13 2 C B VAL 1140 ? ? N B ASN 1141 ? ? CA B ASN 1141 ? ? 144.50 121.70 22.80 2.50 Y 14 2 N B ASN 1141 ? ? CA B ASN 1141 ? ? C B ASN 1141 ? ? 92.22 111.00 -18.78 2.70 N 15 3 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH1 A ARG 26 ? ? 123.30 120.30 3.00 0.50 N 16 3 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.81 120.30 6.51 0.50 N 17 3 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.26 111.50 -9.24 1.40 N 18 3 CG1 B VAL 1140 ? ? CB B VAL 1140 ? ? CG2 B VAL 1140 ? ? 98.40 110.90 -12.50 1.60 N 19 4 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH1 A ARG 26 ? ? 123.53 120.30 3.23 0.50 N 20 4 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.76 120.30 6.46 0.50 N 21 4 NE A ARG 112 ? ? CZ A ARG 112 ? ? NH1 A ARG 112 ? ? 123.40 120.30 3.10 0.50 N 22 4 NE A ARG 117 ? ? CZ A ARG 117 ? ? NH1 A ARG 117 ? ? 124.32 120.30 4.02 0.50 N 23 4 CB B ASN 1141 ? ? CA B ASN 1141 ? ? C B ASN 1141 ? ? 122.70 110.40 12.30 2.00 N 24 5 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH1 A ARG 26 ? ? 123.63 120.30 3.33 0.50 N 25 5 NE A ARG 50 ? ? CZ A ARG 50 ? ? NH1 A ARG 50 ? ? 123.67 120.30 3.37 0.50 N 26 5 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH1 A ARG 104 ? ? 123.59 120.30 3.29 0.50 N 27 5 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.39 111.50 -9.11 1.40 N 28 5 CB B ASN 1141 ? ? CA B ASN 1141 ? ? C B ASN 1141 ? ? 124.96 110.40 14.56 2.00 N 29 6 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 123.76 120.30 3.46 0.50 N 30 6 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.39 111.50 -9.11 1.40 N 31 7 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH1 A ARG 26 ? ? 124.83 120.30 4.53 0.50 N 32 7 CD A ARG 46 ? ? NE A ARG 46 ? ? CZ A ARG 46 ? ? 132.56 123.60 8.96 1.40 N 33 7 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.31 120.30 6.01 0.50 N 34 7 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH2 A ARG 46 ? ? 116.19 120.30 -4.11 0.50 N 35 7 CB A HIS 61 ? ? CA A HIS 61 ? ? C A HIS 61 ? ? 123.35 110.40 12.95 2.00 N 36 7 CB A TYR 68 ? ? CG A TYR 68 ? ? CD2 A TYR 68 ? ? 116.45 121.00 -4.55 0.60 N 37 7 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH1 A ARG 104 ? ? 124.54 120.30 4.24 0.50 N 38 7 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.08 111.50 -9.42 1.40 N 39 7 CA B VAL 1140 ? ? CB B VAL 1140 ? ? CG1 B VAL 1140 ? ? 123.33 110.90 12.43 1.50 N 40 7 C B GLN 1142 ? ? N B PRO 1143 ? ? CD B PRO 1143 ? ? 114.16 128.40 -14.24 2.10 Y 41 8 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.25 120.30 5.95 0.50 N 42 8 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH1 A ARG 104 ? ? 123.34 120.30 3.04 0.50 N 43 8 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 101.79 111.50 -9.71 1.40 N 44 8 CA B VAL 1140 ? ? CB B VAL 1140 ? ? CG1 B VAL 1140 ? ? 121.39 110.90 10.49 1.50 N 45 8 C B ASN 1141 ? ? N B GLN 1142 ? ? CA B GLN 1142 ? ? 137.22 121.70 15.52 2.50 Y 46 9 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 124.32 120.30 4.02 0.50 N 47 9 NE A ARG 50 ? ? CZ A ARG 50 ? ? NH1 A ARG 50 ? ? 123.95 120.30 3.65 0.50 N 48 9 CB A LEU 69 ? ? CG A LEU 69 ? ? CD1 A LEU 69 ? ? 127.00 111.00 16.00 1.70 N 49 9 C A SER 82 ? ? N A MET 83 ? ? CA A MET 83 ? ? 137.31 121.70 15.61 2.50 Y 50 9 NE A ARG 89 ? ? CZ A ARG 89 ? ? NH1 A ARG 89 ? ? 123.89 120.30 3.59 0.50 N 51 9 C B PTR 1139 ? ? N B VAL 1140 ? ? CA B VAL 1140 ? ? 139.60 121.70 17.90 2.50 Y 52 9 CA B VAL 1140 ? ? CB B VAL 1140 ? ? CG1 B VAL 1140 ? ? 121.42 110.90 10.52 1.50 N 53 10 NE A ARG 46 ? ? CZ A ARG 46 ? ? NH1 A ARG 46 ? ? 126.19 120.30 5.89 0.50 N 54 10 CB A LEU 69 ? ? CG A LEU 69 ? ? CD1 A LEU 69 ? ? 127.16 111.00 16.16 1.70 N 55 10 C A SER 82 ? ? N A MET 83 ? ? CA A MET 83 ? ? 138.95 121.70 17.25 2.50 Y 56 10 CA B PRO 1135 ? ? N B PRO 1135 ? ? CD B PRO 1135 ? ? 102.25 111.50 -9.25 1.40 N 57 10 C B PTR 1139 ? ? N B VAL 1140 ? ? CA B VAL 1140 ? ? 139.21 121.70 17.51 2.50 Y 58 10 CA B VAL 1140 ? ? CB B VAL 1140 ? ? CG1 B VAL 1140 ? ? 121.13 110.90 10.23 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 23 ? ? -145.86 47.62 2 1 SER A 25 ? ? -47.89 153.37 3 1 VAL A 45 ? ? -119.06 79.65 4 1 GLU A 47 ? ? -142.75 -156.33 5 1 ARG A 50 ? ? -99.78 -61.67 6 1 HIS A 61 ? ? -113.41 -165.88 7 1 GLN A 63 ? ? -146.44 -27.02 8 1 ILE A 70 ? ? -140.66 -42.74 9 1 ARG A 78 ? ? -128.22 -130.77 10 1 MET A 83 ? ? -29.81 144.31 11 1 GLN A 87 ? ? -97.44 53.24 12 1 THR A 88 ? ? -79.25 20.03 13 1 ARG A 89 ? ? -39.64 43.07 14 1 CYS A 109 ? ? -130.33 -43.50 15 1 GLU B 1138 ? ? -81.93 -92.62 16 1 PTR B 1139 ? ? -106.22 -167.36 17 1 ASN B 1141 ? ? 122.66 -27.80 18 1 GLN B 1142 ? ? -130.69 -136.87 19 2 LEU A 18 ? ? -58.21 0.45 20 2 ARG A 23 ? ? -145.36 47.13 21 2 ILE A 24 ? ? -150.42 81.27 22 2 LEU A 32 ? ? -92.16 -62.28 23 2 ASP A 40 ? ? -55.15 -7.02 24 2 GLU A 47 ? ? -142.87 -149.73 25 2 ARG A 50 ? ? -98.58 -70.46 26 2 CYS A 60 ? ? -119.17 69.27 27 2 GLN A 63 ? ? -145.94 -27.99 28 2 TYR A 68 ? ? -97.47 59.85 29 2 ILE A 70 ? ? -140.71 -29.39 30 2 PRO A 72 ? ? -87.85 -159.35 31 2 ARG A 78 ? ? -118.88 -125.66 32 2 SER A 82 ? ? -150.88 -141.45 33 2 ASP A 85 ? ? -140.54 57.39 34 2 GLN A 87 ? ? -142.52 49.15 35 2 ARG A 89 ? ? -39.73 16.17 36 2 LEU A 107 ? ? -29.62 -59.10 37 2 CYS A 109 ? ? -103.28 -140.63 38 2 ALA A 119 ? ? -74.67 34.77 39 2 GLU B 1138 ? ? -94.00 -95.16 40 2 PTR B 1139 ? ? -92.94 -155.90 41 2 VAL B 1140 ? ? -165.67 118.95 42 2 ASN B 1141 ? ? 158.86 -47.94 43 3 ILE A 24 ? ? -104.48 67.50 44 3 SER A 25 ? ? -46.45 152.18 45 3 GLU A 47 ? ? -142.89 -158.16 46 3 ARG A 50 ? ? -98.25 -63.81 47 3 CYS A 60 ? ? -117.03 65.55 48 3 GLN A 63 ? ? -150.54 -43.72 49 3 TYR A 68 ? ? -107.53 65.64 50 3 ILE A 70 ? ? -141.42 -36.87 51 3 ARG A 78 ? ? -115.10 -122.58 52 3 SER A 82 ? ? -150.98 -146.34 53 3 GLN A 87 ? ? -141.92 47.52 54 3 ARG A 89 ? ? -44.61 36.15 55 3 LEU A 102 ? ? -140.14 56.97 56 3 ASN A 103 ? ? -81.04 -156.82 57 3 CYS A 109 ? ? -91.17 -125.89 58 3 CYS A 114 ? ? -130.38 -61.49 59 3 CYS A 115 ? ? -141.64 -158.48 60 3 PTR B 1139 ? ? 71.78 166.19 61 3 VAL B 1140 ? ? -147.09 -15.87 62 4 ARG A 23 ? ? -147.22 48.30 63 4 ILE A 24 ? ? -150.67 68.63 64 4 ARG A 50 ? ? -98.55 -68.29 65 4 CYS A 60 ? ? -114.76 66.03 66 4 HIS A 61 ? ? -70.06 -168.18 67 4 GLN A 63 ? ? -149.75 -16.14 68 4 ILE A 70 ? ? -141.72 -42.08 69 4 ARG A 78 ? ? -83.76 -145.11 70 4 SER A 82 ? ? -140.45 20.70 71 4 MET A 83 ? ? -26.98 149.25 72 4 GLN A 87 ? ? -141.03 50.99 73 4 ARG A 89 ? ? -38.76 49.17 74 4 GLU A 98 ? ? -82.84 -88.01 75 4 PHE A 99 ? ? -47.91 0.28 76 4 LEU A 102 ? ? -140.63 39.86 77 4 ASN A 103 ? ? -75.56 -161.80 78 4 CYS A 109 ? ? -94.68 -127.68 79 4 ALA A 119 ? ? -80.27 34.63 80 4 GLU B 1138 ? ? -121.91 -114.11 81 4 VAL B 1140 ? ? -140.48 -28.51 82 5 HIS A 14 ? ? -78.54 47.44 83 5 LEU A 18 ? ? -51.41 37.18 84 5 TRP A 19 ? ? -97.89 53.26 85 5 ARG A 23 ? ? -148.63 42.06 86 5 ASP A 40 ? ? -49.30 -16.04 87 5 LEU A 42 ? ? -96.68 57.52 88 5 GLU A 47 ? ? -145.99 -146.08 89 5 ARG A 50 ? ? -99.06 -82.25 90 5 GLN A 63 ? ? -147.07 -27.32 91 5 ILE A 70 ? ? -141.38 -44.87 92 5 PRO A 72 ? ? -89.71 -148.08 93 5 ARG A 78 ? ? -116.87 -127.27 94 5 SER A 82 ? ? -149.66 21.59 95 5 MET A 83 ? ? -27.82 152.51 96 5 GLN A 87 ? ? -140.81 55.20 97 5 ARG A 89 ? ? -38.74 29.07 98 5 LEU A 111 ? ? -139.03 -51.85 99 5 CYS A 114 ? ? -140.62 -157.23 100 5 GLU B 1138 ? ? -133.22 -112.86 101 5 VAL B 1140 ? ? -140.30 -25.88 102 6 ILE A 24 ? ? -100.84 70.50 103 6 SER A 25 ? ? -46.28 151.73 104 6 ASP A 40 ? ? -49.11 -19.70 105 6 ARG A 50 ? ? -98.16 -72.70 106 6 GLN A 63 ? ? -146.08 -26.13 107 6 LEU A 69 ? ? -141.75 28.63 108 6 ARG A 78 ? ? -115.64 -126.16 109 6 ASP A 85 ? ? -140.49 44.62 110 6 GLN A 87 ? ? -141.95 56.70 111 6 ARG A 89 ? ? -38.91 39.74 112 6 VAL A 97 ? ? -70.11 -76.13 113 6 ASN A 103 ? ? -101.71 -163.56 114 6 CYS A 109 ? ? -90.39 -127.33 115 6 GLU B 1138 ? ? -81.45 -106.21 116 6 VAL B 1140 ? ? -140.69 -32.88 117 6 PRO B 1143 ? ? -68.79 52.65 118 7 HIS A 14 ? ? -74.97 41.46 119 7 THR A 16 ? ? -102.57 -74.33 120 7 ARG A 23 ? ? -147.13 52.92 121 7 ILE A 24 ? ? -140.63 59.80 122 7 SER A 25 ? ? -43.58 153.19 123 7 LEU A 32 ? ? -97.30 -60.50 124 7 ASP A 40 ? ? -58.41 22.27 125 7 GLU A 47 ? ? -142.76 -154.16 126 7 ARG A 50 ? ? -98.35 -68.10 127 7 HIS A 61 ? ? -112.70 -146.34 128 7 GLN A 63 ? ? -151.03 -17.90 129 7 ILE A 70 ? ? -139.53 -41.32 130 7 GLU A 74 ? ? -120.93 -167.59 131 7 ARG A 78 ? ? -121.73 -137.98 132 7 MET A 83 ? ? -29.91 156.23 133 7 GLN A 87 ? ? -99.17 54.10 134 7 ARG A 89 ? ? -39.47 35.54 135 7 PRO A 108 ? ? -75.36 -157.13 136 7 CYS A 114 ? ? -136.36 -154.78 137 7 GLU B 1138 ? ? -136.74 -72.40 138 7 PRO B 1143 ? ? 6.16 58.50 139 8 ARG A 23 ? ? -142.58 31.69 140 8 LEU A 42 ? ? -108.87 75.43 141 8 GLU A 47 ? ? -141.56 -158.62 142 8 ARG A 50 ? ? -97.49 -73.85 143 8 CYS A 60 ? ? -115.03 63.31 144 8 HIS A 61 ? ? -66.80 -170.95 145 8 GLN A 63 ? ? -142.29 -28.57 146 8 ILE A 70 ? ? -140.36 -43.00 147 8 ARG A 78 ? ? -106.93 -137.14 148 8 ASP A 85 ? ? -140.31 40.19 149 8 ARG A 89 ? ? -40.36 48.53 150 8 PRO A 108 ? ? -56.17 71.71 151 8 CYS A 109 ? ? -103.54 -128.98 152 8 GLU B 1138 ? ? -108.79 -105.98 153 8 VAL B 1140 ? ? -143.17 -16.89 154 9 ILE A 24 ? ? -154.87 78.23 155 9 SER A 25 ? ? -30.91 121.18 156 9 ASP A 40 ? ? -55.16 2.18 157 9 GLN A 63 ? ? -147.40 -36.24 158 9 ARG A 78 ? ? -109.64 -135.51 159 9 SER A 82 ? ? -148.73 -159.20 160 9 GLN A 87 ? ? -141.24 42.84 161 9 ARG A 89 ? ? -43.21 53.99 162 9 LEU A 102 ? ? -151.44 74.71 163 9 ASN A 103 ? ? -107.30 -167.23 164 9 ARG A 104 ? ? -104.03 76.60 165 9 LEU A 107 ? ? -28.73 -64.16 166 9 CYS A 109 ? ? -86.22 -145.45 167 9 GLN B 1136 ? ? 36.11 92.74 168 9 GLU B 1138 ? ? -137.76 -71.20 169 9 VAL B 1140 ? ? 46.39 -23.79 170 9 PRO B 1143 ? ? -62.24 41.22 171 10 ARG A 23 ? ? -146.29 30.93 172 10 SER A 25 ? ? -45.32 150.16 173 10 GLU A 47 ? ? -143.06 -159.26 174 10 ARG A 50 ? ? -98.99 -64.33 175 10 CYS A 60 ? ? -113.64 75.70 176 10 GLN A 63 ? ? -149.96 -39.36 177 10 LEU A 69 ? ? -140.89 23.36 178 10 GLU A 76 ? ? -106.99 45.10 179 10 ARG A 78 ? ? -124.18 -123.33 180 10 ARG A 89 ? ? -38.14 31.49 181 10 LEU A 102 ? ? -146.47 56.96 182 10 ASN A 103 ? ? -91.18 -154.78 183 10 CYS A 109 ? ? -92.31 -131.95 184 10 GLU B 1138 ? ? -143.64 -60.05 185 10 VAL B 1140 ? ? 46.42 -22.23 186 10 PRO B 1143 ? ? -65.02 59.10 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 107 ? ? PRO A 108 ? ? -129.17 2 1 GLN B 1142 ? ? PRO B 1143 ? ? 75.06 3 4 GLN B 1142 ? ? PRO B 1143 ? ? 149.56 4 5 LEU A 107 ? ? PRO A 108 ? ? -130.73 5 7 GLN B 1142 ? ? PRO B 1143 ? ? -126.24 6 9 GLN B 1142 ? ? PRO B 1143 ? ? 146.38 7 10 GLN B 1142 ? ? PRO B 1143 ? ? 141.52 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 46 ? ? 0.104 'SIDE CHAIN' 2 2 ARG A 46 ? ? 0.117 'SIDE CHAIN' 3 3 ARG A 46 ? ? 0.118 'SIDE CHAIN' 4 5 ARG A 46 ? ? 0.131 'SIDE CHAIN' 5 6 ARG A 26 ? ? 0.100 'SIDE CHAIN' 6 6 ARG A 46 ? ? 0.266 'SIDE CHAIN' 7 8 TYR A 68 ? ? 0.085 'SIDE CHAIN' 8 9 ARG A 46 ? ? 0.093 'SIDE CHAIN' 9 10 ARG A 46 ? ? 0.113 'SIDE CHAIN' #