HEADER HYDROLASE INHIBITOR 15-OCT-10 2L4V TITLE THREE DIMENSIONAL STRUCTURE OF PINEAPPLE CYSTATIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTATIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANANAS COMOSUS; SOURCE 3 ORGANISM_COMMON: PINEAPPLE; SOURCE 4 ORGANISM_TAXID: 4615; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS CYSTATIN, PROTEASE INHIBITOR, HYDROLASE INHIBITOR EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.C.L.CHYAN,I.I.DELI,B.B.J.CHEN REVDAT 3 01-MAY-24 2L4V 1 REMARK REVDAT 2 11-FEB-15 2L4V 1 JRNL REMARK REVDAT 1 26-OCT-11 2L4V 0 JRNL AUTH D.IRENE,B.J.CHEN,S.H.LO,T.H.LIU,J.T.C.TZEN,C.L.CHYAN JRNL TITL RESONANCE ASSIGNMENTS AND SECONDARY STRUCTURE OF A JRNL TITL 2 PHYTOCYSTATIN FROM ANANAS COMOSUS JRNL REF BIOMOL.NMR ASSIGN. V. 6 99 2012 JRNL REFN ISSN 1874-2718 JRNL PMID 21814766 JRNL DOI 10.1007/S12104-011-9334-1 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.IRENE,T.Y.CHUNG,B.J.CHEN,T.H.LIU,F.Y.LI,J.T.C.TZEN, REMARK 1 AUTH 2 C.I.WANG,C.L.CHYAN REMARK 1 TITL SOLUTION STRUCTURE OF A PHYTOCYSTATIN FROM ANANAS COMOSUS REMARK 1 TITL 2 AND ITS MOLECULAR INTERACTION WITH PAPAIN REMARK 1 REF PLOS ONE V. 7 47865 2012 REMARK 1 REFN ESSN 1932-6203 REMARK 1 PMID 23139757 REMARK 1 DOI 10.1371/JOURNAL.PONE.0047865 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AURELIA 3.9.7, CNS 1.2 REMARK 3 AUTHORS : NEIDIG, GEYER, GORLER, ANTZ, SAFFRICH, BENEICKE, REMARK 3 KALBITZER (AURELIA), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS REMARK 4 REMARK 4 2L4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000101959. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.02 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 TO 1 MM [U-99% 13C; U-99% REMARK 210 15N] PINEAPPLE CYSTATIN-1, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCA; 3D HN(CO)CA; 3D HNCO; REMARK 210 3D HN(CA)CO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D C(CO)NH; 3D HBHA(CO) REMARK 210 NH; 3D H(CCO)NH; 2D DQF-COSY; 2D REMARK 210 1H-1H NOESY; 3D HCCH-COSY; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AURELIA 3.9.7, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 80.04 60.34 REMARK 500 1 PRO A 11 -167.98 -74.93 REMARK 500 1 GLU A 14 -68.70 -149.07 REMARK 500 1 GLU A 15 -174.61 -177.29 REMARK 500 1 ALA A 18 -43.12 -167.79 REMARK 500 1 GLU A 20 93.15 60.33 REMARK 500 1 ALA A 23 -75.40 -96.60 REMARK 500 1 ASP A 34 -170.97 60.32 REMARK 500 1 GLN A 35 177.72 60.66 REMARK 500 1 TYR A 47 -51.59 -177.57 REMARK 500 1 ALA A 49 69.23 -176.12 REMARK 500 1 LEU A 51 80.47 59.41 REMARK 500 1 ASN A 53 51.04 -91.36 REMARK 500 1 ASN A 74 -37.65 -176.75 REMARK 500 1 ASN A 75 169.44 -46.84 REMARK 500 1 ALA A 76 -175.26 -57.53 REMARK 500 1 ARG A 82 165.85 174.80 REMARK 500 1 VAL A 91 99.98 -161.29 REMARK 500 2 GLU A 4 -76.39 -59.71 REMARK 500 2 GLN A 5 53.51 -157.46 REMARK 500 2 LYS A 7 107.75 60.20 REMARK 500 2 PRO A 11 -168.24 -74.27 REMARK 500 2 ALA A 12 -169.71 -77.79 REMARK 500 2 ALA A 21 148.95 -174.46 REMARK 500 2 ALA A 23 110.81 60.46 REMARK 500 2 HIS A 30 102.87 -176.48 REMARK 500 2 ASP A 33 177.89 60.27 REMARK 500 2 ASP A 34 112.12 61.03 REMARK 500 2 GLN A 35 74.82 -67.69 REMARK 500 2 GLU A 36 80.65 58.85 REMARK 500 2 MET A 43 -179.89 -58.34 REMARK 500 2 TYR A 47 -42.48 -170.16 REMARK 500 2 ALA A 49 52.55 -140.22 REMARK 500 2 PRO A 50 -73.83 -59.15 REMARK 500 2 ASN A 74 -37.16 -176.84 REMARK 500 2 ASN A 75 168.99 -46.45 REMARK 500 2 ALA A 76 -175.15 -57.21 REMARK 500 2 ARG A 82 165.89 174.38 REMARK 500 2 VAL A 91 101.75 -160.00 REMARK 500 2 GLN A 127 -61.01 -93.29 REMARK 500 3 ASP A 3 80.07 60.49 REMARK 500 3 GLU A 4 -75.35 -76.86 REMARK 500 3 PRO A 11 -167.97 -75.89 REMARK 500 3 GLU A 14 98.31 -177.59 REMARK 500 3 ALA A 19 -40.67 -175.17 REMARK 500 3 GLU A 20 -176.84 60.92 REMARK 500 3 ALA A 21 -169.94 60.88 REMARK 500 3 ALA A 23 -169.75 60.64 REMARK 500 3 GLU A 24 -176.95 60.72 REMARK 500 3 ASP A 33 -74.42 -121.36 REMARK 500 REMARK 500 THIS ENTRY HAS 428 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17258 RELATED DB: BMRB DBREF 2L4V A 1 135 UNP Q687J0 Q687J0_ANACO 1 135 SEQRES 1 A 135 MET ALA ASP GLU GLN PRO LYS LYS PRO VAL PRO ALA ALA SEQRES 2 A 135 GLU GLU ALA PRO ALA ALA GLU ALA GLU ALA GLU GLU GLU SEQRES 3 A 135 GLU GLY LEU HIS LEU GLU ASP ASP GLN GLU PRO ARG GLU SEQRES 4 A 135 HIS PRO ILE MET GLY GLY ILE TYR ASP ALA PRO LEU ASN SEQRES 5 A 135 ASN GLU ASN GLY PHE ASP LYS GLU ASP LEU ALA ARG PHE SEQRES 6 A 135 ALA VAL ARG GLU TYR ASN ASN LYS ASN ASN ALA LEU LEU SEQRES 7 A 135 GLU PHE VAL ARG VAL VAL LYS ALA LYS GLU GLN VAL VAL SEQRES 8 A 135 SER GLY MET MET HIS TYR LEU THR VAL GLU VAL ASN ASP SEQRES 9 A 135 ALA GLY LYS LYS LYS LEU TYR GLU ALA LYS VAL TRP GLU SEQRES 10 A 135 GLN VAL TRP MET ASN PHE ARG GLN LEU GLN GLU PHE THR SEQRES 11 A 135 TYR LEU GLY ASP ALA HELIX 1 1 GLY A 56 ASN A 74 1 19 SHEET 1 A 4 GLU A 79 GLN A 89 0 SHEET 2 A 4 MET A 94 ASP A 104 -1 O ASN A 103 N GLU A 79 SHEET 3 A 4 LYS A 107 GLU A 117 -1 O VAL A 115 N HIS A 96 SHEET 4 A 4 ARG A 124 TYR A 131 -1 O GLN A 125 N TRP A 116 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1