HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-OCT-10 2L57 TITLE SOLUTION STRUCTURE OF AN UNCHARACTERIZED THIOREDOIN-LIKE PROTEIN FROM TITLE 2 CLOSTRIDIUM PERFRINGENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 28-142; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 195103; SOURCE 4 STRAIN: ATCC 13124 / NCTC 8237 / TYPE A; SOURCE 5 GENE: CPF_2862; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, THIOREDOXIN-LIKE, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC, NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 4 CONSORTIUM, NYSGRC, PSI-BIOLOGY EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.HARRIS,R.FOTI,R.D.SEIDEL,J.B.BONANNO,J.FREEMAN,K.T.BAIN,J.M.SAUDER, AUTHOR 2 S.K.BURLEY,M.E.GIRVIN,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC),NEW YORK STRUCTURAL GENOMICS RESEARCH AUTHOR 4 CONSORTIUM (NYSGRC) REVDAT 5 01-MAY-24 2L57 1 REMARK REVDAT 4 10-FEB-21 2L57 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 14-NOV-18 2L57 1 AUTHOR REVDAT 2 08-MAY-13 2L57 1 AUTHOR REMARK KEYWDS VERSN REVDAT 1 17-NOV-10 2L57 0 JRNL AUTH R.HARRIS,R.FOTI,R.D.SEIDEL,J.B.BONANNO,J.FREEMAN,K.T.BAIN, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,M.E.GIRVIN,S.C.ALMO JRNL TITL SOLUTION STRUCTURE OF AN UNCHARACTERIZED THIOREDOIN-LIKE JRNL TITL 2 PROTEIN FROM CLOSTRIDIUM PERFRINGENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT IN A BOX OF WATER REMARK 4 REMARK 4 2L57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000101971. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 UNCHARACTERIZED THIOREDOXIN-LIKE REMARK 210 PROTEIN, 20 MM SODIUM PHOSPHATE, REMARK 210 1 MM DTT, 50 MM SODIUM CHLORIDE, REMARK 210 90% H2O, 10% D2O; 1 MM [U-100% REMARK 210 13C; U-100% 15N] UNCHARACTERIZED REMARK 210 THIOREDOXIN-LIKE PROTEIN, 20 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 1 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N HSQC; 15N NOESY-HSQC; 13C REMARK 210 HSQC; AROMATIC 13C HSQC; 13C REMARK 210 NOESY-HSQC; 13C AROMATIC NOESY- REMARK 210 HSQC; HNCO; HNCACO; HNCOCA; REMARK 210 HNCACB; CBCACONH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATING ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 20 STRUCTURES FOR LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG2 PRO A 28 HA VAL A 117 1.29 REMARK 500 HB3 PHE A 88 HD13 LEU A 115 1.33 REMARK 500 OD2 ASP A 79 HZ2 LYS A 95 1.52 REMARK 500 HZ3 LYS A 105 OE1 GLU A 109 1.54 REMARK 500 HZ2 LYS A 34 OE2 GLU A 67 1.57 REMARK 500 HZ1 LYS A 53 OE1 GLU A 54 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 4 -64.46 66.34 REMARK 500 1 LYS A 7 35.50 -162.69 REMARK 500 1 GLN A 8 25.93 -140.85 REMARK 500 1 GLN A 12 -18.24 156.78 REMARK 500 1 ASP A 36 -74.55 -49.68 REMARK 500 1 LYS A 58 -36.73 -144.14 REMARK 500 1 ASP A 90 -164.48 -75.15 REMARK 500 2 LEU A 3 -71.39 -57.00 REMARK 500 2 LYS A 7 -63.69 72.76 REMARK 500 2 ILE A 9 -159.15 -112.67 REMARK 500 2 PHE A 11 -175.73 72.78 REMARK 500 2 GLN A 12 -61.20 69.13 REMARK 500 2 ARG A 55 74.55 -111.96 REMARK 500 2 LEU A 66 11.20 -69.75 REMARK 500 2 LEU A 115 -64.97 -91.12 REMARK 500 2 LYS A 118 59.51 -107.56 REMARK 500 2 GLU A 119 -86.40 -119.70 REMARK 500 2 HIS A 123 -56.40 70.17 REMARK 500 3 SER A 2 -51.74 -150.90 REMARK 500 3 LEU A 3 -153.95 -110.47 REMARK 500 3 ILE A 6 -19.73 170.28 REMARK 500 3 LYS A 7 103.68 80.16 REMARK 500 3 GLN A 8 89.45 65.24 REMARK 500 3 ILE A 14 -61.21 -108.41 REMARK 500 3 ASN A 15 30.18 -85.25 REMARK 500 3 CYS A 38 106.02 74.61 REMARK 500 3 ASN A 81 -40.20 -151.76 REMARK 500 3 ASP A 90 -172.67 -69.80 REMARK 500 3 VAL A 117 100.09 -43.14 REMARK 500 3 LYS A 118 -178.40 169.66 REMARK 500 3 HIS A 122 88.00 -64.01 REMARK 500 3 HIS A 123 36.51 -158.85 REMARK 500 3 HIS A 125 -35.84 -154.57 REMARK 500 4 SER A 2 69.94 -153.76 REMARK 500 4 LEU A 3 79.90 64.67 REMARK 500 4 LYS A 7 -61.39 72.13 REMARK 500 4 ILE A 9 128.35 -176.27 REMARK 500 4 ASN A 10 -71.29 -166.24 REMARK 500 4 GLN A 12 -67.64 171.50 REMARK 500 4 ILE A 14 -60.10 70.96 REMARK 500 4 ASN A 15 30.40 -83.30 REMARK 500 4 LYS A 24 -168.95 -173.86 REMARK 500 4 GLU A 25 -170.72 75.55 REMARK 500 4 THR A 35 -173.09 -67.72 REMARK 500 4 THR A 37 -98.02 -137.96 REMARK 500 4 CYS A 38 130.13 65.71 REMARK 500 4 ARG A 55 88.93 -153.00 REMARK 500 4 LEU A 115 -66.72 -93.47 REMARK 500 4 HIS A 122 -56.96 72.24 REMARK 500 4 HIS A 123 -93.97 -120.97 REMARK 500 REMARK 500 THIS ENTRY HAS 221 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11217H RELATED DB: TARGETDB REMARK 900 RELATED ID: NYSGRC-011325 RELATED DB: TARGETTRACK DBREF 2L57 A 4 118 UNP Q0TMB4 Q0TMB4_CLOP1 28 142 SEQADV 2L57 MET A 1 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 SER A 2 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 LEU A 3 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 GLU A 119 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 GLY A 120 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 121 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 122 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 123 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 124 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 125 UNP Q0TMB4 EXPRESSION TAG SEQADV 2L57 HIS A 126 UNP Q0TMB4 EXPRESSION TAG SEQRES 1 A 126 MET SER LEU GLU GLY ILE LYS GLN ILE ASN PHE GLN SER SEQRES 2 A 126 ILE ASN VAL VAL GLU ASN LEU GLU GLU ALA LYS GLU GLY SEQRES 3 A 126 ILE PRO THR ILE ILE MET PHE LYS THR ASP THR CYS PRO SEQRES 4 A 126 TYR CYS VAL GLU MET GLN LYS GLU LEU SER TYR VAL SER SEQRES 5 A 126 LYS GLU ARG GLU GLY LYS PHE ASN ILE TYR TYR ALA ARG SEQRES 6 A 126 LEU GLU GLU GLU LYS ASN ILE ASP LEU ALA TYR LYS TYR SEQRES 7 A 126 ASP ALA ASN ILE VAL PRO THR THR VAL PHE LEU ASP LYS SEQRES 8 A 126 GLU GLY ASN LYS PHE TYR VAL HIS GLN GLY LEU MET ARG SEQRES 9 A 126 LYS ASN ASN ILE GLU THR ILE LEU ASN SER LEU GLY VAL SEQRES 10 A 126 LYS GLU GLY HIS HIS HIS HIS HIS HIS HELIX 1 1 CYS A 38 ARG A 55 1 18 HELIX 2 2 GLU A 69 TYR A 78 1 10 HELIX 3 3 ARG A 104 GLY A 116 1 13 SHEET 1 A 5 VAL A 16 VAL A 17 0 SHEET 2 A 5 ASN A 60 ARG A 65 1 O ILE A 61 N VAL A 17 SHEET 3 A 5 THR A 29 LYS A 34 1 N LYS A 34 O ALA A 64 SHEET 4 A 5 THR A 85 LEU A 89 -1 O VAL A 87 N ILE A 31 SHEET 5 A 5 LYS A 95 GLN A 100 -1 O HIS A 99 N THR A 86 CISPEP 1 VAL A 83 PRO A 84 1 -0.15 CISPEP 2 VAL A 83 PRO A 84 2 -0.65 CISPEP 3 VAL A 83 PRO A 84 3 -0.92 CISPEP 4 VAL A 83 PRO A 84 4 -0.06 CISPEP 5 VAL A 83 PRO A 84 5 -1.35 CISPEP 6 VAL A 83 PRO A 84 6 -1.61 CISPEP 7 VAL A 83 PRO A 84 7 -0.82 CISPEP 8 VAL A 83 PRO A 84 8 -0.56 CISPEP 9 VAL A 83 PRO A 84 9 -0.56 CISPEP 10 VAL A 83 PRO A 84 10 -0.57 CISPEP 11 VAL A 83 PRO A 84 11 -1.91 CISPEP 12 VAL A 83 PRO A 84 12 -0.23 CISPEP 13 VAL A 83 PRO A 84 13 -0.68 CISPEP 14 VAL A 83 PRO A 84 14 -0.46 CISPEP 15 VAL A 83 PRO A 84 15 0.04 CISPEP 16 VAL A 83 PRO A 84 16 -1.99 CISPEP 17 VAL A 83 PRO A 84 17 -0.48 CISPEP 18 VAL A 83 PRO A 84 18 -0.89 CISPEP 19 VAL A 83 PRO A 84 19 -1.19 CISPEP 20 VAL A 83 PRO A 84 20 -0.62 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1