data_2LA5 # _entry.id 2LA5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LA5 pdb_00002la5 10.2210/pdb2la5/pdb RCSB RCSB102148 ? ? BMRB 17504 ? 10.13018/BMR17504 WWPDB D_1000102148 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' pdbx_nmr_spectrometer 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LA5 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-03-03 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_id 17504 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Phan, A.' 1 'Kuryavyi, V.' 2 'Darnell, J.' 3 'Serganov, A.' 4 'Majumdar, A.' 5 'Ilin, S.' 6 'Darnell, R.' 7 'Patel, D.' 8 # _citation.id primary _citation.title 'Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 18 _citation.page_first 796 _citation.page_last 804 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21642970 _citation.pdbx_database_id_DOI 10.1038/nsmb.2064 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Phan, A.T.' 1 ? primary 'Kuryavyi, V.' 2 ? primary 'Darnell, J.C.' 3 ? primary 'Serganov, A.' 4 ? primary 'Majumdar, A.' 5 ? primary 'Ilin, S.' 6 ? primary 'Raslin, T.' 7 ? primary 'Polonskaia, A.' 8 ? primary 'Chen, C.' 9 ? primary 'Clain, D.' 10 ? primary 'Darnell, R.B.' 11 ? primary 'Patel, D.J.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (36-MER)' 11805.026 1 ? ? ? ? 2 polymer man 'Fragile X mental retardation 1 protein' 1757.924 1 ? ? 'RNA-binding RGG-box residues 527-541' ? # _entity_name_com.entity_id 2 _entity_name_com.name 'FMRP, Protein FMR-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCUGCGGUGUGGAAGGAGUGGCUGGGUUGCGCAGCG GCUGCGGUGUGGAAGGAGUGGCUGGGUUGCGCAGCG A ? 2 'polypeptide(L)' no no GPRRGDGRRRGGGGRGQ GPRRGDGRRRGGGGRGQ B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 U n 1 4 G n 1 5 C n 1 6 G n 1 7 G n 1 8 U n 1 9 G n 1 10 U n 1 11 G n 1 12 G n 1 13 A n 1 14 A n 1 15 G n 1 16 G n 1 17 A n 1 18 G n 1 19 U n 1 20 G n 1 21 G n 1 22 C n 1 23 U n 1 24 G n 1 25 G n 1 26 G n 1 27 U n 1 28 U n 1 29 G n 1 30 C n 1 31 G n 1 32 C n 1 33 A n 1 34 G n 1 35 C n 1 36 G n 2 1 GLY n 2 2 PRO n 2 3 ARG n 2 4 ARG n 2 5 GLY n 2 6 ASP n 2 7 GLY n 2 8 ARG n 2 9 ARG n 2 10 ARG n 2 11 GLY n 2 12 GLY n 2 13 GLY n 2 14 GLY n 2 15 ARG n 2 16 GLY n 2 17 GLN n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene FMR1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 C 2 2 2 C C A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 C 5 5 5 C C A . n A 1 6 G 6 6 6 G G A . n A 1 7 G 7 7 7 G G A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 U 10 10 10 U U A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 A 13 13 13 A A A . n A 1 14 A 14 14 14 A A A . n A 1 15 G 15 15 15 G G A . n A 1 16 G 16 16 16 G G A . n A 1 17 A 17 17 17 A A A . n A 1 18 G 18 18 18 G G A . n A 1 19 U 19 19 19 U U A . n A 1 20 G 20 20 20 G G A . n A 1 21 G 21 21 21 G G A . n A 1 22 C 22 22 22 C C A . n A 1 23 U 23 23 23 U U A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 U 27 27 27 U U A . n A 1 28 U 28 28 28 U U A . n A 1 29 G 29 29 29 G G A . n A 1 30 C 30 30 30 C C A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 G 34 34 34 G G A . n A 1 35 C 35 35 35 C C A . n A 1 36 G 36 36 36 G G A . n B 2 1 GLY 1 1 1 GLY GLY B . n B 2 2 PRO 2 2 2 PRO PRO B . n B 2 3 ARG 3 3 3 ARG ARG B . n B 2 4 ARG 4 4 4 ARG ARG B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 ASP 6 6 6 ASP ASP B . n B 2 7 GLY 7 7 7 GLY GLY B . n B 2 8 ARG 8 8 8 ARG ARG B . n B 2 9 ARG 9 9 9 ARG ARG B . n B 2 10 ARG 10 10 10 ARG ARG B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 GLY 12 12 12 GLY GLY B . n B 2 13 GLY 13 13 13 GLY GLY B . n B 2 14 GLY 14 14 14 GLY GLY B . n B 2 15 ARG 15 15 15 ARG ARG B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 GLN 17 17 17 GLN GLN B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LA5 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LA5 _struct.title 'RNA Duplex-Quadruplex Junction Complex with FMRP RGG peptide' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LA5 _struct_keywords.pdbx_keywords 'RNA Binding Protein/RNA' _struct_keywords.text 'RNA Binding Protein-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 2LA5 2LA5 1 ? ? ? 2 UNP FMR1_HUMAN Q06787 2 RRGDGRRRGGGGRGQ 527 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2LA5 A 1 ? 17 ? 2LA5 1 ? 17 ? 1 17 2 2 2LA5 B 3 ? 17 ? Q06787 527 ? 541 ? 3 17 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 2LA5 GLY B 1 ? UNP Q06787 ? ? 'expression tag' 1 1 2 2LA5 PRO B 2 ? UNP Q06787 ? ? 'expression tag' 2 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 35 N3 ? ? A G 1 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 35 O2 ? ? A G 1 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 35 N4 ? ? A G 1 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 34 N1 ? ? A C 2 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 34 O6 ? ? A C 2 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 34 N2 ? ? A C 2 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 33 N1 ? ? A U 3 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 33 N6 ? ? A U 3 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 4 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 4 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 4 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 5 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 5 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 5 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N1 ? ? ? 1_555 A G 9 O6 ? ? A G 6 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 6 N2 ? ? ? 1_555 A G 9 N7 ? ? A G 6 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 6 N7 ? ? ? 1_555 A G 18 N2 ? ? A G 6 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A G 18 N1 ? ? A G 6 A G 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 7 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 7 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 7 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 17 N6 ? ? A U 8 A A 17 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog23 hydrog ? ? A U 8 N3 ? ? ? 1_555 A G 29 O6 ? ? A U 8 A G 29 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? A U 8 O2 ? ? ? 1_555 A G 29 N1 ? ? A U 8 A G 29 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A G 9 N1 ? ? ? 1_555 A G 26 O6 ? ? A G 9 A G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A G 9 N2 ? ? ? 1_555 A G 26 N7 ? ? A G 9 A G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 A G 15 O6 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A G 15 N7 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A G 11 N7 ? ? ? 1_555 A G 24 N2 ? ? A G 11 A G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A G 11 O6 ? ? ? 1_555 A G 24 N1 ? ? A G 11 A G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A G 12 N1 ? ? ? 1_555 A G 16 O6 ? ? A G 12 A G 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 16 N7 ? ? A G 12 A G 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? A G 12 N7 ? ? ? 1_555 A G 25 N2 ? ? A G 12 A G 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? A G 12 O6 ? ? ? 1_555 A G 25 N1 ? ? A G 12 A G 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? A G 15 N1 ? ? ? 1_555 A G 20 O6 ? ? A G 15 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? A G 15 N2 ? ? ? 1_555 A G 20 N7 ? ? A G 15 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? A G 16 N1 ? ? ? 1_555 A G 21 O6 ? ? A G 16 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? A G 16 N2 ? ? ? 1_555 A G 21 N7 ? ? A G 16 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? A G 18 N7 ? ? ? 1_555 A G 26 N2 ? ? A G 18 A G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? A G 18 O6 ? ? ? 1_555 A G 26 N1 ? ? A G 18 A G 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? A G 20 N1 ? ? ? 1_555 A G 24 O6 ? ? A G 20 A G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? A G 20 N2 ? ? ? 1_555 A G 24 N7 ? ? A G 20 A G 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? A G 21 N1 ? ? ? 1_555 A G 25 O6 ? ? A G 21 A G 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? A G 21 N2 ? ? ? 1_555 A G 25 N7 ? ? A G 21 A G 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LA5 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LA5 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM RNA (36-MER), 1 mM Peptide, 90% H2O/10% D2O and 100%D2O' 1 '90% H2O/10% D2O and 100%D2O' '0.5 mM [U-100% 13C; U-100% 15N] RNA (36-MER), 0.5 mM Peptide, 90% H2O/10% D2O and 100%D2O' 2 '90% H2O/10% D2O and 100%D2O' '0.5 mM RNA (36-MER), 0.5 mM [U-100% 13C; U-100% 15N] Peptide, 90% H2O/10% D2O and 100%D2O' 3 '90% H2O/10% D2O and 100%D2O' '0.2-0.5 mM [U-100% 13C; U-100% 15N] RNA (36-MER), 0.2-0.5 mM [U-100% 13C; U-100% 15N] Peptide, 90% H2O/10% D2O and 100%D2O' 4 '90% H2O/10% D2O and 100%D2O' '0.5 mM [U-13C; U-15N]-Gua RNA (36-MER), 0.5 mM Peptide, 90% H2O/10% D2O and 100%D2O' 5 '90% H2O/10% D2O and 100%D2O' '0.2 mM [U-13C; U-15N]-Ade RNA (36-MER), 0.2 mM Peptide, 90% H2O/10% D2O and 100%D2O' 6 '90% H2O/10% D2O and 100%D2O' '0.2 mM [U-13C; U-15N]-Cyt RNA (36-MER), 0.2 mM Peptide, 90% H2O/10% D2O and 100%D2O' 7 '90% H2O/10% D2O and 100%D2O' '0.2 mM [U-13C; U-15N]-Ura RNA (36-MER), 0.2 mM Peptide, 90% H2O/10% D2O and 100%D2O' 8 '90% H2O/10% D2O and 100%D2O' '0.2 mM rG-to-dG and rU-to-dU 2% 15N-labelled RNA (36-MER), 0.2 mM Peptide, 90% H2O/10% D2O and 100%D2O' 9 '90% H2O/10% D2O and 100%D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'RNA (36-MER)-1' 1 ? mM ? 1 Peptide-2 1 ? mM ? 1 'RNA (36-MER)-3' 0.5 ? mM '[U-100% 13C; U-100% 15N]' 2 Peptide-4 0.5 ? mM ? 2 'RNA (36-MER)-5' 0.5 ? mM ? 3 Peptide-6 0.5 ? mM '[U-100% 13C; U-100% 15N]' 3 'RNA (36-MER)-7' ? 0.2-0.5 mM '[U-100% 13C; U-100% 15N]' 4 Peptide-8 ? 0.2-0.5 mM '[U-100% 13C; U-100% 15N]' 4 'RNA (36-MER)-9' 0.5 ? mM '[U-13C; U-15N]-Gua' 5 Peptide-10 0.5 ? mM ? 5 'RNA (36-MER)-11' 0.2 ? mM '[U-13C; U-15N]-Ade' 6 Peptide-12 0.2 ? mM ? 6 'RNA (36-MER)-13' 0.2 ? mM '[U-13C; U-15N]-Cyt' 7 Peptide-14 0.2 ? mM ? 7 'RNA (36-MER)-15' 0.2 ? mM '[U-13C; U-15N]-Ura' 8 Peptide-16 0.2 ? mM ? 8 'RNA (36-MER)-17' 0.2 ? mM 'rG-to-dG and rU-to-dU 2% 15N-labelled' 9 Peptide-18 0.2 ? mM ? 9 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.050 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 JR 1 2 1 '2D 1H-1H NOESY' 1 3 1 '2D 1H-1H COSY' 1 4 1 '2D 1H-1H TOCSY' 1 5 2 '2D 1H-13C HSQC' 1 6 2 '2D 1H-15N HSQC' 1 7 2 '2D 13C-1H CTHSQC' 1 8 2 HNH-COSY 1 9 2 HNN-COSY 1 10 2 HCCH-COSY 1 11 2 HCCH-TOCSY 1 12 2 '13C-edited NOESY' 1 13 2 '15N-edited NOESY' 1 14 3 '15N-1H HSQC' 1 15 3 '13C-1H HSQC' 1 16 3 HNCA 1 17 3 HNCO 1 18 3 HNCOCA 1 19 3 HNCACB 1 20 3 HBHACONH 1 21 3 HCCH-TOCSY 1 22 3 HCCH-COSY 1 23 3 '13C-edited NOESY' 1 24 3 '15N-edited NOESY' 1 25 4 HNN-COSY 1 26 4 '13C-edited NOESY' 1 27 4 '15N-edited NOESY' 1 28 5 CTHSQC 1 29 5 HCCH-COSY 1 30 5 HCCH-TOCSY 1 31 5 '13C-edited NOESY' 1 32 6 CTHSQC 1 33 6 HCCH-COSY 1 34 6 HCCH-TOCSY 1 35 6 '13C-edited NOESY' 1 36 7 CTHSQC 1 37 7 HCCH-COSY 1 38 7 HCCH-TOCSY 1 39 7 '13C-edited NOESY' 1 40 8 CTHSQC 1 41 8 HCCH-COSY 1 42 8 HCCH-TOCSY 1 43 8 '13C-edited NOESY' 1 44 9 '1D 15N-filtered' 1 45 9 '2D NOESY' # _pdbx_nmr_refine.entry_id 2LA5 _pdbx_nmr_refine.method 'torsion angle dynamics, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' ? 1 'Accelrys Software Inc.' 'geometry optimization' Amber ? 2 'Accelrys Software Inc.' processing Felix ? 3 Varian collection VNMR ? 4 'Bruker Biospin' collection TopSpin ? 5 'K. Wuthrich' 'data analysis' CARA ? 6 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 7 'Accelrys Software Inc.' refinement Amber ? 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ARG N N N N 38 ARG CA C N S 39 ARG C C N N 40 ARG O O N N 41 ARG CB C N N 42 ARG CG C N N 43 ARG CD C N N 44 ARG NE N N N 45 ARG CZ C N N 46 ARG NH1 N N N 47 ARG NH2 N N N 48 ARG OXT O N N 49 ARG H H N N 50 ARG H2 H N N 51 ARG HA H N N 52 ARG HB2 H N N 53 ARG HB3 H N N 54 ARG HG2 H N N 55 ARG HG3 H N N 56 ARG HD2 H N N 57 ARG HD3 H N N 58 ARG HE H N N 59 ARG HH11 H N N 60 ARG HH12 H N N 61 ARG HH21 H N N 62 ARG HH22 H N N 63 ARG HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 C OP3 O N N 81 C P P N N 82 C OP1 O N N 83 C OP2 O N N 84 C "O5'" O N N 85 C "C5'" C N N 86 C "C4'" C N R 87 C "O4'" O N N 88 C "C3'" C N S 89 C "O3'" O N N 90 C "C2'" C N R 91 C "O2'" O N N 92 C "C1'" C N R 93 C N1 N N N 94 C C2 C N N 95 C O2 O N N 96 C N3 N N N 97 C C4 C N N 98 C N4 N N N 99 C C5 C N N 100 C C6 C N N 101 C HOP3 H N N 102 C HOP2 H N N 103 C "H5'" H N N 104 C "H5''" H N N 105 C "H4'" H N N 106 C "H3'" H N N 107 C "HO3'" H N N 108 C "H2'" H N N 109 C "HO2'" H N N 110 C "H1'" H N N 111 C H41 H N N 112 C H42 H N N 113 C H5 H N N 114 C H6 H N N 115 G OP3 O N N 116 G P P N N 117 G OP1 O N N 118 G OP2 O N N 119 G "O5'" O N N 120 G "C5'" C N N 121 G "C4'" C N R 122 G "O4'" O N N 123 G "C3'" C N S 124 G "O3'" O N N 125 G "C2'" C N R 126 G "O2'" O N N 127 G "C1'" C N R 128 G N9 N Y N 129 G C8 C Y N 130 G N7 N Y N 131 G C5 C Y N 132 G C6 C N N 133 G O6 O N N 134 G N1 N N N 135 G C2 C N N 136 G N2 N N N 137 G N3 N N N 138 G C4 C Y N 139 G HOP3 H N N 140 G HOP2 H N N 141 G "H5'" H N N 142 G "H5''" H N N 143 G "H4'" H N N 144 G "H3'" H N N 145 G "HO3'" H N N 146 G "H2'" H N N 147 G "HO2'" H N N 148 G "H1'" H N N 149 G H8 H N N 150 G H1 H N N 151 G H21 H N N 152 G H22 H N N 153 GLN N N N N 154 GLN CA C N S 155 GLN C C N N 156 GLN O O N N 157 GLN CB C N N 158 GLN CG C N N 159 GLN CD C N N 160 GLN OE1 O N N 161 GLN NE2 N N N 162 GLN OXT O N N 163 GLN H H N N 164 GLN H2 H N N 165 GLN HA H N N 166 GLN HB2 H N N 167 GLN HB3 H N N 168 GLN HG2 H N N 169 GLN HG3 H N N 170 GLN HE21 H N N 171 GLN HE22 H N N 172 GLN HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 PRO N N N N 184 PRO CA C N S 185 PRO C C N N 186 PRO O O N N 187 PRO CB C N N 188 PRO CG C N N 189 PRO CD C N N 190 PRO OXT O N N 191 PRO H H N N 192 PRO HA H N N 193 PRO HB2 H N N 194 PRO HB3 H N N 195 PRO HG2 H N N 196 PRO HG3 H N N 197 PRO HD2 H N N 198 PRO HD3 H N N 199 PRO HXT H N N 200 U OP3 O N N 201 U P P N N 202 U OP1 O N N 203 U OP2 O N N 204 U "O5'" O N N 205 U "C5'" C N N 206 U "C4'" C N R 207 U "O4'" O N N 208 U "C3'" C N S 209 U "O3'" O N N 210 U "C2'" C N R 211 U "O2'" O N N 212 U "C1'" C N R 213 U N1 N N N 214 U C2 C N N 215 U O2 O N N 216 U N3 N N N 217 U C4 C N N 218 U O4 O N N 219 U C5 C N N 220 U C6 C N N 221 U HOP3 H N N 222 U HOP2 H N N 223 U "H5'" H N N 224 U "H5''" H N N 225 U "H4'" H N N 226 U "H3'" H N N 227 U "HO3'" H N N 228 U "H2'" H N N 229 U "HO2'" H N N 230 U "H1'" H N N 231 U H3 H N N 232 U H5 H N N 233 U H6 H N N 234 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ARG N CA sing N N 40 ARG N H sing N N 41 ARG N H2 sing N N 42 ARG CA C sing N N 43 ARG CA CB sing N N 44 ARG CA HA sing N N 45 ARG C O doub N N 46 ARG C OXT sing N N 47 ARG CB CG sing N N 48 ARG CB HB2 sing N N 49 ARG CB HB3 sing N N 50 ARG CG CD sing N N 51 ARG CG HG2 sing N N 52 ARG CG HG3 sing N N 53 ARG CD NE sing N N 54 ARG CD HD2 sing N N 55 ARG CD HD3 sing N N 56 ARG NE CZ sing N N 57 ARG NE HE sing N N 58 ARG CZ NH1 sing N N 59 ARG CZ NH2 doub N N 60 ARG NH1 HH11 sing N N 61 ARG NH1 HH12 sing N N 62 ARG NH2 HH21 sing N N 63 ARG NH2 HH22 sing N N 64 ARG OXT HXT sing N N 65 ASP N CA sing N N 66 ASP N H sing N N 67 ASP N H2 sing N N 68 ASP CA C sing N N 69 ASP CA CB sing N N 70 ASP CA HA sing N N 71 ASP C O doub N N 72 ASP C OXT sing N N 73 ASP CB CG sing N N 74 ASP CB HB2 sing N N 75 ASP CB HB3 sing N N 76 ASP CG OD1 doub N N 77 ASP CG OD2 sing N N 78 ASP OD2 HD2 sing N N 79 ASP OXT HXT sing N N 80 C OP3 P sing N N 81 C OP3 HOP3 sing N N 82 C P OP1 doub N N 83 C P OP2 sing N N 84 C P "O5'" sing N N 85 C OP2 HOP2 sing N N 86 C "O5'" "C5'" sing N N 87 C "C5'" "C4'" sing N N 88 C "C5'" "H5'" sing N N 89 C "C5'" "H5''" sing N N 90 C "C4'" "O4'" sing N N 91 C "C4'" "C3'" sing N N 92 C "C4'" "H4'" sing N N 93 C "O4'" "C1'" sing N N 94 C "C3'" "O3'" sing N N 95 C "C3'" "C2'" sing N N 96 C "C3'" "H3'" sing N N 97 C "O3'" "HO3'" sing N N 98 C "C2'" "O2'" sing N N 99 C "C2'" "C1'" sing N N 100 C "C2'" "H2'" sing N N 101 C "O2'" "HO2'" sing N N 102 C "C1'" N1 sing N N 103 C "C1'" "H1'" sing N N 104 C N1 C2 sing N N 105 C N1 C6 sing N N 106 C C2 O2 doub N N 107 C C2 N3 sing N N 108 C N3 C4 doub N N 109 C C4 N4 sing N N 110 C C4 C5 sing N N 111 C N4 H41 sing N N 112 C N4 H42 sing N N 113 C C5 C6 doub N N 114 C C5 H5 sing N N 115 C C6 H6 sing N N 116 G OP3 P sing N N 117 G OP3 HOP3 sing N N 118 G P OP1 doub N N 119 G P OP2 sing N N 120 G P "O5'" sing N N 121 G OP2 HOP2 sing N N 122 G "O5'" "C5'" sing N N 123 G "C5'" "C4'" sing N N 124 G "C5'" "H5'" sing N N 125 G "C5'" "H5''" sing N N 126 G "C4'" "O4'" sing N N 127 G "C4'" "C3'" sing N N 128 G "C4'" "H4'" sing N N 129 G "O4'" "C1'" sing N N 130 G "C3'" "O3'" sing N N 131 G "C3'" "C2'" sing N N 132 G "C3'" "H3'" sing N N 133 G "O3'" "HO3'" sing N N 134 G "C2'" "O2'" sing N N 135 G "C2'" "C1'" sing N N 136 G "C2'" "H2'" sing N N 137 G "O2'" "HO2'" sing N N 138 G "C1'" N9 sing N N 139 G "C1'" "H1'" sing N N 140 G N9 C8 sing Y N 141 G N9 C4 sing Y N 142 G C8 N7 doub Y N 143 G C8 H8 sing N N 144 G N7 C5 sing Y N 145 G C5 C6 sing N N 146 G C5 C4 doub Y N 147 G C6 O6 doub N N 148 G C6 N1 sing N N 149 G N1 C2 sing N N 150 G N1 H1 sing N N 151 G C2 N2 sing N N 152 G C2 N3 doub N N 153 G N2 H21 sing N N 154 G N2 H22 sing N N 155 G N3 C4 sing N N 156 GLN N CA sing N N 157 GLN N H sing N N 158 GLN N H2 sing N N 159 GLN CA C sing N N 160 GLN CA CB sing N N 161 GLN CA HA sing N N 162 GLN C O doub N N 163 GLN C OXT sing N N 164 GLN CB CG sing N N 165 GLN CB HB2 sing N N 166 GLN CB HB3 sing N N 167 GLN CG CD sing N N 168 GLN CG HG2 sing N N 169 GLN CG HG3 sing N N 170 GLN CD OE1 doub N N 171 GLN CD NE2 sing N N 172 GLN NE2 HE21 sing N N 173 GLN NE2 HE22 sing N N 174 GLN OXT HXT sing N N 175 GLY N CA sing N N 176 GLY N H sing N N 177 GLY N H2 sing N N 178 GLY CA C sing N N 179 GLY CA HA2 sing N N 180 GLY CA HA3 sing N N 181 GLY C O doub N N 182 GLY C OXT sing N N 183 GLY OXT HXT sing N N 184 PRO N CA sing N N 185 PRO N CD sing N N 186 PRO N H sing N N 187 PRO CA C sing N N 188 PRO CA CB sing N N 189 PRO CA HA sing N N 190 PRO C O doub N N 191 PRO C OXT sing N N 192 PRO CB CG sing N N 193 PRO CB HB2 sing N N 194 PRO CB HB3 sing N N 195 PRO CG CD sing N N 196 PRO CG HG2 sing N N 197 PRO CG HG3 sing N N 198 PRO CD HD2 sing N N 199 PRO CD HD3 sing N N 200 PRO OXT HXT sing N N 201 U OP3 P sing N N 202 U OP3 HOP3 sing N N 203 U P OP1 doub N N 204 U P OP2 sing N N 205 U P "O5'" sing N N 206 U OP2 HOP2 sing N N 207 U "O5'" "C5'" sing N N 208 U "C5'" "C4'" sing N N 209 U "C5'" "H5'" sing N N 210 U "C5'" "H5''" sing N N 211 U "C4'" "O4'" sing N N 212 U "C4'" "C3'" sing N N 213 U "C4'" "H4'" sing N N 214 U "O4'" "C1'" sing N N 215 U "C3'" "O3'" sing N N 216 U "C3'" "C2'" sing N N 217 U "C3'" "H3'" sing N N 218 U "O3'" "HO3'" sing N N 219 U "C2'" "O2'" sing N N 220 U "C2'" "C1'" sing N N 221 U "C2'" "H2'" sing N N 222 U "O2'" "HO2'" sing N N 223 U "C1'" N1 sing N N 224 U "C1'" "H1'" sing N N 225 U N1 C2 sing N N 226 U N1 C6 sing N N 227 U C2 O2 doub N N 228 U C2 N3 sing N N 229 U N3 C4 sing N N 230 U N3 H3 sing N N 231 U C4 O4 doub N N 232 U C4 C5 sing N N 233 U C5 C6 doub N N 234 U C5 H5 sing N N 235 U C6 H6 sing N N 236 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2LA5 'bulge loop' 2LA5 'quadruple helix' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian UNITY 1 'Varian Unity' 600 Bruker AVANCE 2 'Bruker Avance' 700 Bruker AVANCE 3 'Bruker Avance' 800 Bruker AVANCE 4 'Bruker Avance' # _atom_sites.entry_id 2LA5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_