HEADER CELL ADHESION 25-APR-11 2LC6 TITLE SOLUTION STRUCTURE OF PAR-6 Q144C/L164C COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAR-6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 130-255; COMPND 5 SYNONYM: PAR-6, LD29223P; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: CG5884, DMEL_CG5884, PAR-6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PBH4 KEYWDS PDZ DOMAIN, CRIB, CDC42, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.F.VOLKMAN,D.S.WHITNEY,F.C.PETERSON REVDAT 2 14-JUN-23 2LC6 1 REMARK SEQADV REVDAT 1 30-NOV-11 2LC6 0 JRNL AUTH D.S.WHITNEY,F.C.PETERSON,B.F.VOLKMAN JRNL TITL A CONFORMATIONAL SWITCH IN THE CRIB-PDZ MODULE OF PAR-6. JRNL REF STRUCTURE V. 19 1711 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 22078569 JRNL DOI 10.1016/J.STR.2011.07.018 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.9.3 REMARK 3 AUTHORS : REMARK 3 SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTOMATED METHODS WERE USED FOR REMARK 3 BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. REMARK 3 FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT REMARK 3 SOLVENTSTRUCTURES ARE BASED ON A TOTAL OF 1604 NOE CONSTRAINTS ( REMARK 3 407 INTRA, 388 SEQUENTIAL, 251 MEDIUM, AND 558 LONG RANGE) AND REMARK 3 165 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS., STRUCTURES ARE REMARK 3 BASED ON A TOTAL OF 1604 NOE CONSTRAINTS ( 407 INTRA, 388 REMARK 3 SEQUENTIAL, 251 MEDIUM, AND 558 LONG RANGE) AND 165 PHI AND PSI REMARK 3 DIHEDRAL ANGLE CONSTRAINTS. REMARK 4 REMARK 4 2LC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000102216. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 53 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PAR-6, 20 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, NMRPIPE 2007, XEASY REMARK 210 1.3, GARANT 2.1, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 165 OD1 ASP A 169 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 222 -28.71 73.18 REMARK 500 1 GLN A 254 67.99 66.88 REMARK 500 2 PRO A 134 38.69 -75.62 REMARK 500 2 PRO A 139 -159.93 -85.91 REMARK 500 2 ASP A 150 17.93 53.69 REMARK 500 2 SER A 168 160.89 66.28 REMARK 500 2 ASN A 253 88.56 59.93 REMARK 500 3 LYS A 130 -60.21 -90.02 REMARK 500 3 PRO A 134 108.98 -49.68 REMARK 500 3 SER A 135 -45.94 -151.07 REMARK 500 3 ILE A 136 98.63 67.06 REMARK 500 3 LYS A 170 167.52 59.92 REMARK 500 3 ASN A 222 -54.28 71.69 REMARK 500 3 VAL A 226 -20.32 61.89 REMARK 500 4 LYS A 130 -60.21 -120.68 REMARK 500 4 THR A 131 72.21 51.45 REMARK 500 4 ILE A 136 114.45 72.60 REMARK 500 4 HIS A 140 23.10 -146.07 REMARK 500 4 ASP A 169 -73.70 -53.49 REMARK 500 4 LYS A 170 161.46 59.95 REMARK 500 4 ASN A 222 -27.18 76.37 REMARK 500 4 ASN A 253 66.72 62.51 REMARK 500 4 GLN A 254 -37.83 69.38 REMARK 500 5 LYS A 130 82.02 44.48 REMARK 500 5 SER A 168 -68.81 67.17 REMARK 500 5 VAL A 226 -20.26 61.56 REMARK 500 5 ASN A 253 75.80 70.29 REMARK 500 6 LYS A 130 95.95 67.78 REMARK 500 6 SER A 135 86.38 55.98 REMARK 500 6 PHE A 142 -70.74 -128.09 REMARK 500 6 SER A 168 -175.28 174.41 REMARK 500 6 VAL A 226 -14.93 64.02 REMARK 500 7 PRO A 139 76.61 -67.69 REMARK 500 7 HIS A 140 24.23 -162.14 REMARK 500 7 ASN A 222 -71.03 71.19 REMARK 500 7 VAL A 226 0.95 55.46 REMARK 500 7 ASN A 253 81.35 49.21 REMARK 500 8 ASN A 253 96.09 58.70 REMARK 500 9 VAL A 226 -11.04 59.13 REMARK 500 9 GLN A 254 89.48 70.38 REMARK 500 10 THR A 131 -62.97 -162.02 REMARK 500 10 LYS A 132 86.33 56.79 REMARK 500 10 SER A 135 108.77 68.95 REMARK 500 10 HIS A 140 73.95 -100.90 REMARK 500 10 ASN A 222 -71.47 71.35 REMARK 500 10 ASN A 253 -177.06 66.63 REMARK 500 11 LYS A 130 92.97 -175.78 REMARK 500 11 SER A 135 75.35 57.35 REMARK 500 11 ASN A 253 97.80 65.41 REMARK 500 12 SER A 137 81.57 58.86 REMARK 500 REMARK 500 THIS ENTRY HAS 94 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 ARG A 160 0.08 SIDE CHAIN REMARK 500 10 ARG A 160 0.09 SIDE CHAIN REMARK 500 20 ARG A 160 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17599 RELATED DB: BMRB REMARK 900 RELATED ID: 2LC7 RELATED DB: PDB DBREF 2LC6 A 130 255 UNP O97111 O97111_DROME 130 255 SEQADV 2LC6 GLY A 128 UNP O97111 EXPRESSION TAG SEQADV 2LC6 SER A 129 UNP O97111 EXPRESSION TAG SEQADV 2LC6 CYS A 144 UNP O97111 GLN 144 ENGINEERED MUTATION SEQADV 2LC6 CYS A 164 UNP O97111 LEU 164 ENGINEERED MUTATION SEQRES 1 A 128 GLY SER LYS THR LYS ALA PRO SER ILE SER ILE PRO HIS SEQRES 2 A 128 ASP PHE ARG CYS VAL SER ALA ILE ILE ASP VAL ASP ILE SEQRES 3 A 128 VAL PRO GLU THR HIS ARG ARG VAL ARG LEU CYS LYS HIS SEQRES 4 A 128 GLY SER ASP LYS PRO LEU GLY PHE TYR ILE ARG ASP GLY SEQRES 5 A 128 THR SER VAL ARG VAL THR ALA SER GLY LEU GLU LYS GLN SEQRES 6 A 128 PRO GLY ILE PHE ILE SER ARG LEU VAL PRO GLY GLY LEU SEQRES 7 A 128 ALA GLU SER THR GLY LEU LEU ALA VAL ASN ASP GLU VAL SEQRES 8 A 128 ILE GLU VAL ASN GLY ILE GLU VAL ALA GLY LYS THR LEU SEQRES 9 A 128 ASP GLN VAL THR ASP MET MET VAL ALA ASN SER SER ASN SEQRES 10 A 128 LEU ILE ILE THR VAL LYS PRO ALA ASN GLN ARG HELIX 1 1 GLY A 204 GLY A 210 1 7 HELIX 2 2 THR A 230 ASN A 241 1 12 SHEET 1 A 5 ARG A 159 CYS A 164 0 SHEET 2 A 5 ASN A 244 LYS A 250 -1 O VAL A 249 N ARG A 159 SHEET 3 A 5 GLU A 217 VAL A 221 -1 N ILE A 219 O THR A 248 SHEET 4 A 5 LEU A 189 LEU A 200 -1 N ILE A 195 O VAL A 218 SHEET 5 A 5 PHE A 174 VAL A 184 -1 N ARG A 177 O PHE A 196 SHEET 1 B 4 ARG A 159 CYS A 164 0 SHEET 2 B 4 ASN A 244 LYS A 250 -1 O VAL A 249 N ARG A 159 SHEET 3 B 4 GLU A 217 VAL A 221 -1 N ILE A 219 O THR A 248 SHEET 4 B 4 ILE A 224 GLU A 225 -1 O ILE A 224 N VAL A 221 SSBOND 1 CYS A 144 CYS A 164 1555 1555 2.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1