HEADER TRANSCRIPTION 16-MAY-11 2LD7 TITLE SOLUTION STRUCTURE OF THE MSIN3A PAH3-SAP30 SID COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: INTERACTION WITH SIN3A REGION RESIDUES 130-220; COMPND 5 SYNONYM: 30 KDA SIN3-ASSOCIATED POLYPEPTIDE, SIN3 COREPRESSOR COMPLEX COMPND 6 SUBUNIT SAP30, SIN3-ASSOCIATED POLYPEPTIDE P30; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PAIRED AMPHIPATHIC HELIX PROTEIN SIN3A; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: PAH 3 DOMAIN RESIDUES 456-528; COMPND 12 SYNONYM: HISTONE DEACETYLASE COMPLEX SUBUNIT SIN3A, TRANSCRIPTIONAL COMPND 13 COREPRESSOR SIN3A; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SAP30; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PMCSG23; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 GENE: SIN3A, KIAA4126; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PMCSG7 KEYWDS TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.XIE,Y.HE,H.KORKEAMAKI,Y.ZHANG,R.IMHOFF,O.LOHI,I.RADHAKRISHNAN REVDAT 4 15-MAY-24 2LD7 1 REMARK REVDAT 3 14-JUN-23 2LD7 1 REMARK SEQADV REVDAT 2 04-APR-12 2LD7 1 JRNL VERSN REVDAT 1 15-JUN-11 2LD7 0 JRNL AUTH T.XIE,Y.HE,H.KORKEAMAKI,Y.ZHANG,R.IMHOFF,O.LOHI, JRNL AUTH 2 I.RADHAKRISHNAN JRNL TITL STRUCTURE OF THE 30-KDA SIN3-ASSOCIATED PROTEIN (SAP30) IN JRNL TITL 2 COMPLEX WITH THE MAMMALIAN SIN3A COREPRESSOR AND ITS ROLE IN JRNL TITL 3 NUCLEIC ACID BINDING. JRNL REF J.BIOL.CHEM. V. 286 27814 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21676866 JRNL DOI 10.1074/JBC.M111.252494 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2, CNS REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), BRUNGER, REMARK 3 ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LD7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000102253. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN 1, 1 MM PROTEIN 2, 90% REMARK 210 H2O/10% D2O; 1 MM PROTEIN 1, 1 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN 2, 90% H2O/10% D2O; 1 MM REMARK 210 [U-100% 13C; U-100% 15N] PROTEIN REMARK 210 1, 1 MM PROTEIN 2, 100% D2O; 1 REMARK 210 MM PROTEIN 1, 1 MM [U-100% 13C; REMARK 210 U-100% 15N] PROTEIN 2, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 2D 1H-15N HSQC; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D HNCO; REMARK 210 3D HCCH-COSY; 3D HCCH-TOCSY; 2D REMARK 210 1H-13C HSQC AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, FELIX 98, VNMRJ, CNS REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 128 177.44 67.38 REMARK 500 1 ASP A 137 -54.93 72.67 REMARK 500 1 GLN A 141 106.93 -166.64 REMARK 500 1 THR A 145 112.00 72.02 REMARK 500 1 LYS A 166 81.78 56.67 REMARK 500 1 ASN A 206 -80.58 -103.48 REMARK 500 1 ASN A 209 85.82 63.77 REMARK 500 1 SER A 211 -73.75 -80.03 REMARK 500 1 ASP A 212 84.48 47.06 REMARK 500 1 ASP A 216 -71.48 -84.70 REMARK 500 1 ALA B 456 -75.31 -99.03 REMARK 500 1 SER B 457 34.42 -90.71 REMARK 500 1 LYS B 458 -71.69 -101.98 REMARK 500 1 ARG B 476 -46.05 71.25 REMARK 500 1 PHE B 508 -61.50 -106.58 REMARK 500 1 LYS B 526 -76.19 -67.73 REMARK 500 1 GLU B 527 19.08 58.76 REMARK 500 2 ASN A 128 -176.77 65.66 REMARK 500 2 GLN A 141 77.23 -101.63 REMARK 500 2 ASP A 144 10.07 59.93 REMARK 500 2 THR A 145 110.50 73.45 REMARK 500 2 LYS A 166 74.57 54.50 REMARK 500 2 ASN A 206 -72.15 -109.23 REMARK 500 2 ASN A 209 117.52 179.67 REMARK 500 2 LEU A 213 64.12 61.59 REMARK 500 2 ALA A 215 -50.94 -173.36 REMARK 500 2 ARG B 476 -59.94 69.23 REMARK 500 2 PHE B 508 -65.73 -90.56 REMARK 500 3 ASP A 133 -101.42 42.27 REMARK 500 3 ASP A 134 79.06 54.29 REMARK 500 3 ASP A 142 101.92 64.91 REMARK 500 3 LYS A 166 77.53 57.64 REMARK 500 3 SER A 188 34.86 -147.45 REMARK 500 3 ASN A 209 -49.52 -154.42 REMARK 500 3 LYS A 210 124.56 -175.52 REMARK 500 3 SER A 211 104.23 -57.09 REMARK 500 3 ASP A 212 -70.57 -102.88 REMARK 500 3 LEU A 213 -45.16 179.43 REMARK 500 3 SER A 217 -60.83 -170.58 REMARK 500 3 LYS B 458 -153.27 61.60 REMARK 500 3 ARG B 476 -1.63 69.28 REMARK 500 3 LYS B 526 -71.02 -59.82 REMARK 500 3 GLU B 527 92.03 64.58 REMARK 500 4 ASN A 128 83.96 69.02 REMARK 500 4 ASP A 132 90.49 55.16 REMARK 500 4 ASP A 134 115.47 -169.35 REMARK 500 4 PRO A 139 -159.38 -77.86 REMARK 500 4 GLN A 141 -170.12 -170.24 REMARK 500 4 ASP A 142 86.59 65.67 REMARK 500 4 ASP A 144 -60.45 -90.94 REMARK 500 REMARK 500 THIS ENTRY HAS 225 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17653 RELATED DB: BMRB DBREF 2LD7 A 130 220 UNP O88574 SAP30_MOUSE 130 220 DBREF 2LD7 B 456 528 UNP Q60520 SIN3A_MOUSE 456 528 SEQADV 2LD7 SER A 127 UNP O88574 EXPRESSION TAG SEQADV 2LD7 ASN A 128 UNP O88574 EXPRESSION TAG SEQADV 2LD7 ALA A 129 UNP O88574 EXPRESSION TAG SEQADV 2LD7 SER B 454 UNP Q60520 EXPRESSION TAG SEQADV 2LD7 ASN B 455 UNP Q60520 EXPRESSION TAG SEQRES 1 A 94 SER ASN ALA GLY SER ASP ASP ASP GLY GLY ASP SER PRO SEQRES 2 A 94 VAL GLN ASP ILE ASP THR PRO GLU VAL ASP LEU TYR GLN SEQRES 3 A 94 LEU GLN VAL ASN THR LEU ARG ARG TYR LYS ARG HIS PHE SEQRES 4 A 94 LYS LEU PRO THR ARG PRO GLY LEU ASN LYS ALA GLN LEU SEQRES 5 A 94 VAL GLU ILE VAL GLY CYS HIS PHE LYS SER ILE PRO VAL SEQRES 6 A 94 ASN GLU LYS ASP THR LEU THR CYS PHE ILE TYR SER VAL SEQRES 7 A 94 ARG ASN ASP LYS ASN LYS SER ASP LEU LYS ALA ASP SER SEQRES 8 A 94 GLY VAL HIS SEQRES 1 B 75 SER ASN ALA SER LYS HIS GLY VAL GLY THR GLU SER LEU SEQRES 2 B 75 PHE PHE ASP LYS VAL ARG LYS ALA LEU ARG SER ALA GLU SEQRES 3 B 75 ALA TYR GLU ASN PHE LEU ARG CYS LEU VAL ILE PHE ASN SEQRES 4 B 75 GLN GLU VAL ILE SER ARG ALA GLU LEU VAL GLN LEU VAL SEQRES 5 B 75 SER PRO PHE LEU GLY LYS PHE PRO GLU LEU PHE ASN TRP SEQRES 6 B 75 PHE LYS ASN PHE LEU GLY TYR LYS GLU SER HELIX 1 1 VAL A 155 HIS A 164 1 10 HELIX 2 2 LYS A 175 PHE A 186 1 12 HELIX 3 3 GLU A 193 ASN A 206 1 14 HELIX 4 4 THR B 463 LEU B 475 1 13 HELIX 5 5 ALA B 478 ASN B 492 1 15 HELIX 6 6 ARG B 498 LEU B 504 1 7 HELIX 7 7 SER B 506 LEU B 509 1 4 HELIX 8 8 PRO B 513 LEU B 523 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1