HEADER REPLICATION 14-JUN-11 2LE8 TITLE THE PROTEIN COMPLEX FOR DNA REPLICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPLICATION LICENSING FACTOR MCM6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 708-821; COMPND 5 SYNONYM: P105MCM; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA REPLICATION FACTOR CDT1; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 413-440; COMPND 12 SYNONYM: DOUBLE PARKED HOMOLOG, DUP; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MCM6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: CDT1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS DNA REPLICATION, REPLICATION EXPDTA SOLUTION NMR NUMMDL 19 AUTHOR C.LIU,Z.WEI,G.ZHU REVDAT 4 15-MAY-24 2LE8 1 REMARK REVDAT 3 14-JUN-23 2LE8 1 REMARK SEQADV REVDAT 2 21-JUN-17 2LE8 1 JRNL REVDAT 1 19-DEC-12 2LE8 0 JRNL AUTH C.LIU,R.WU,B.ZHOU,J.WANG,Z.WEI,B.K.TYE,C.LIANG,G.ZHU JRNL TITL STRUCTURAL INSIGHTS INTO THE CDT1-MEDIATED MCM2-7 CHROMATIN JRNL TITL 2 LOADING JRNL REF NUCLEIC ACIDS RES. V. 40 3208 2012 JRNL REFN ESSN 1362-4962 JRNL PMID 22140117 JRNL DOI 10.1093/NAR/GKR1118 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR, CNS, HADDOCK1.3 REMARK 3 AUTHORS : VARIAN (VNMR), BRUNGER, ADAMS, CLORE, GROS, NILGES REMARK 3 AND READ (CNS), ALEXANDRE BONVIN (HADDOCK1.3) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LE8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000102286. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 3 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 25 MM MES-1, 300 MM SODIUM REMARK 210 CHLORIDE-2, 1 % GLYCEROL-3, 0.8 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 ENTITY_2-4, 1 MM ENTITY_1-5, 90% REMARK 210 H2O/10% D2O; 25 MM [U-100% 15N] REMARK 210 MES-6, 300 MM SODIUM CHLORIDE-7, REMARK 210 1 % GLYCEROL-8, 0.8 MM [U-100% REMARK 210 13C; U-100% 15N] ENTITY_1-9, 1.0 REMARK 210 MM ENTITY_2-10, 90% H2O/10% D2O; REMARK 210 25 MM MES-11, 300 MM SODIUM REMARK 210 CHLORIDE-12, 1 % GLYCEROL-13, REMARK 210 0.8 MM [U-100% 13C; U-100% 15N] REMARK 210 ENTITY_1-14, 1.0 MM ENTITY_2-15, REMARK 210 100% D2O; 25 MM MES-16, 300 MM REMARK 210 SODIUM CHLORIDE-17, 1 % GLYCEROL- REMARK 210 18, 0.8 MM [U-100% 13C; U-100% REMARK 210 15N] ENTITY_2-19, 1.0 MM ENTITY_ REMARK 210 1-20, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D C(CO) REMARK 210 NH; 3D H(CCO)NH; 3D HCCH-TOCSY; REMARK 210 3D 1H-13C NOESY; 3D 1H-15N NOESY; REMARK 210 13C/15N FILTERED-C13 EDITED NOE; REMARK 210 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, CYANA, REMARK 210 PROCHECKNMR REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 51 OE1 GLU A 54 1.57 REMARK 500 OD1 ASP A 58 HZ1 LYS B 400 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 9 -177.96 63.40 REMARK 500 1 ARG A 11 -46.13 -138.74 REMARK 500 1 LEU A 12 -30.25 -143.35 REMARK 500 1 GLU A 35 -83.27 -107.37 REMARK 500 1 ASP A 36 -54.98 -177.81 REMARK 500 1 GLU A 37 99.60 -164.04 REMARK 500 1 ALA A 39 -179.57 62.37 REMARK 500 1 LEU A 40 71.82 54.73 REMARK 500 1 LYS A 41 59.58 -154.97 REMARK 500 1 HIS A 79 -82.31 -141.60 REMARK 500 1 LEU A 87 -72.67 -69.60 REMARK 500 1 GLN A 89 -43.29 -142.59 REMARK 500 1 SER A 95 -169.03 65.28 REMARK 500 1 THR A 96 -85.65 62.98 REMARK 500 1 GLU A 100 -76.52 -63.65 REMARK 500 1 GLU A 103 -71.55 -72.13 REMARK 500 1 PRO A 106 -76.47 -53.32 REMARK 500 1 TYR A 114 -164.46 59.87 REMARK 500 1 GLU A 117 -80.01 -107.94 REMARK 500 1 LYS B 383 77.78 59.45 REMARK 500 1 SER B 386 77.79 55.99 REMARK 500 2 SER A 9 137.03 69.07 REMARK 500 2 ASP A 36 -75.42 69.13 REMARK 500 2 ALA A 39 -149.01 53.80 REMARK 500 2 LEU A 40 -37.51 -155.95 REMARK 500 2 LYS A 41 103.24 65.73 REMARK 500 2 HIS A 79 -76.43 -132.10 REMARK 500 2 LEU A 87 -85.27 -80.24 REMARK 500 2 LYS A 93 -55.70 -122.92 REMARK 500 2 SER A 95 40.32 -147.80 REMARK 500 2 SER A 99 -80.65 -83.72 REMARK 500 2 GLU A 100 -91.30 -150.67 REMARK 500 2 LYS B 383 42.10 -104.11 REMARK 500 2 SER B 386 -41.02 163.51 REMARK 500 2 ALA B 403 -72.41 -84.58 REMARK 500 2 GLN B 404 9.05 -163.22 REMARK 500 2 THR B 406 -87.59 61.22 REMARK 500 3 SER A 9 -70.00 -121.24 REMARK 500 3 LEU A 12 -54.63 -154.95 REMARK 500 3 HIS A 79 -73.60 -124.40 REMARK 500 3 LEU A 87 -73.48 -67.45 REMARK 500 3 GLU A 97 88.79 64.94 REMARK 500 3 GLU A 100 -72.73 -135.62 REMARK 500 3 GLU A 104 -153.80 -89.19 REMARK 500 3 ASN A 113 -156.83 -139.83 REMARK 500 3 TYR A 114 147.83 177.16 REMARK 500 3 LYS B 383 -70.54 70.03 REMARK 500 3 SER B 386 -47.89 71.88 REMARK 500 3 LEU B 402 -79.05 -106.06 REMARK 500 3 ALA B 403 -46.75 -177.77 REMARK 500 REMARK 500 THIS ENTRY HAS 286 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17702 RELATED DB: BMRB DBREF 2LE8 A 5 118 UNP Q14566 MCM6_HUMAN 708 821 DBREF 2LE8 B 380 407 UNP Q9H211 CDT1_HUMAN 413 440 SEQADV 2LE8 SER A 18 UNP Q14566 CYS 721 ENGINEERED MUTATION SEQADV 2LE8 TRP B 408 UNP Q9H211 EXPRESSION TAG SEQRES 1 A 114 ALA PRO LYS ALA SER LEU ARG LEU GLY PHE SER GLU TYR SEQRES 2 A 114 SER ARG ILE SER ASN LEU ILE VAL LEU HIS LEU ARG LYS SEQRES 3 A 114 VAL GLU GLU GLU GLU ASP GLU SER ALA LEU LYS ARG SER SEQRES 4 A 114 GLU LEU VAL ASN TRP TYR LEU LYS GLU ILE GLU SER GLU SEQRES 5 A 114 ILE ASP SER GLU GLU GLU LEU ILE ASN LYS LYS ARG ILE SEQRES 6 A 114 ILE GLU LYS VAL ILE HIS ARG LEU THR HIS TYR ASP HIS SEQRES 7 A 114 VAL LEU ILE GLU LEU THR GLN ALA GLY LEU LYS GLY SER SEQRES 8 A 114 THR GLU GLY SER GLU SER TYR GLU GLU ASP PRO TYR LEU SEQRES 9 A 114 VAL VAL ASN PRO ASN TYR LEU LEU GLU ASP SEQRES 1 B 29 SER ALA LEU LYS GLY VAL SER GLN ASP LEU LEU GLU ARG SEQRES 2 B 29 ILE ARG ALA LYS GLU ALA GLN LYS GLN LEU ALA GLN MET SEQRES 3 B 29 THR ARG TRP HELIX 1 1 ALA A 5 SER A 9 5 5 HELIX 2 2 PHE A 14 GLU A 35 1 22 HELIX 3 3 LYS A 41 GLU A 54 1 14 HELIX 4 4 SER A 59 THR A 78 1 20 HELIX 5 5 SER B 386 GLU B 391 1 6 HELIX 6 6 GLU B 391 ALA B 403 1 13 SHEET 1 A 2 LEU A 84 ILE A 85 0 SHEET 2 A 2 VAL A 109 VAL A 110 -1 O VAL A 109 N ILE A 85 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1