data_2LF7 # _entry.id 2LF7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LF7 pdb_00002lf7 10.2210/pdb2lf7/pdb RCSB RCSB102318 ? ? BMRB 17741 ? ? WWPDB D_1000102318 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 17741 BMRB unspecified . 2LF8 PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LF7 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-06-28 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Coyne III, H.' 1 'Green, S.M.' 2 'Graves, B.J.' 3 'Mcintosh, L.P.' 4 # _citation.id primary _citation.title 'Autoinhibition of ETV6 (TEL) DNA Binding: Appended Helices Sterically Block the ETS Domain.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 421 _citation.page_first 67 _citation.page_last 84 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22584210 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2012.05.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Coyne, H.J.' 1 ? primary 'De, S.' 2 ? primary 'Okon, M.' 3 ? primary 'Green, S.M.' 4 ? primary 'Bhachech, N.' 5 ? primary 'Graves, B.J.' 6 ? primary 'McIntosh, L.P.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Transcription factor ETV6' _entity.formula_weight 13060.987 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ETS DNA binding domain residues 335-436' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ETS translocation variant 6, ETS-related protein Tel1, Tel' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQR LLFRFMKTPDEIMSGRTDRLEHLESQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQR LLFRFMKTPDEIMSGRTDRLEHLESQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ARG n 1 6 LEU n 1 7 LEU n 1 8 TRP n 1 9 ASP n 1 10 TYR n 1 11 VAL n 1 12 TYR n 1 13 GLN n 1 14 LEU n 1 15 LEU n 1 16 SER n 1 17 ASP n 1 18 SER n 1 19 ARG n 1 20 TYR n 1 21 GLU n 1 22 ASN n 1 23 PHE n 1 24 ILE n 1 25 ARG n 1 26 TRP n 1 27 GLU n 1 28 ASP n 1 29 LYS n 1 30 GLU n 1 31 SER n 1 32 LYS n 1 33 ILE n 1 34 PHE n 1 35 ARG n 1 36 ILE n 1 37 VAL n 1 38 ASP n 1 39 PRO n 1 40 ASN n 1 41 GLY n 1 42 LEU n 1 43 ALA n 1 44 ARG n 1 45 LEU n 1 46 TRP n 1 47 GLY n 1 48 ASN n 1 49 HIS n 1 50 LYS n 1 51 ASN n 1 52 ARG n 1 53 THR n 1 54 ASN n 1 55 MET n 1 56 THR n 1 57 TYR n 1 58 GLU n 1 59 LYS n 1 60 MET n 1 61 SER n 1 62 ARG n 1 63 ALA n 1 64 LEU n 1 65 ARG n 1 66 HIS n 1 67 TYR n 1 68 TYR n 1 69 LYS n 1 70 LEU n 1 71 ASN n 1 72 ILE n 1 73 ILE n 1 74 ARG n 1 75 LYS n 1 76 GLU n 1 77 PRO n 1 78 GLY n 1 79 GLN n 1 80 ARG n 1 81 LEU n 1 82 LEU n 1 83 PHE n 1 84 ARG n 1 85 PHE n 1 86 MET n 1 87 LYS n 1 88 THR n 1 89 PRO n 1 90 ASP n 1 91 GLU n 1 92 ILE n 1 93 MET n 1 94 SER n 1 95 GLY n 1 96 ARG n 1 97 THR n 1 98 ASP n 1 99 ARG n 1 100 LEU n 1 101 GLU n 1 102 HIS n 1 103 LEU n 1 104 GLU n 1 105 SER n 1 106 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Etv6, mouse ETV6, Tel, Tel1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET28b+ _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ETV6_MOUSE _struct_ref.pdbx_db_accession P97360 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQRLLFR FMKTPDEIMSGRTDRLEHLESQ ; _struct_ref.pdbx_align_begin 335 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LF7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P97360 _struct_ref_seq.db_align_beg 335 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 436 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 335 _struct_ref_seq.pdbx_auth_seq_align_end 436 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2LF7 GLY A 1 ? UNP P97360 ? ? 'expression tag' 331 1 1 2LF7 SER A 2 ? UNP P97360 ? ? 'expression tag' 332 2 1 2LF7 HIS A 3 ? UNP P97360 ? ? 'expression tag' 333 3 1 2LF7 MET A 4 ? UNP P97360 ? ? 'expression tag' 334 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-13C NOESY' 1 3 1 '2D 1H-13C HSQC aromatic' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HNCACB' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '3D HN(CO)CA' 1 8 1 '3D HNCO' 1 9 1 '3D HBHA(CO)NH' 1 10 1 '3D 1H-13C NOESY' 1 11 1 dipsi3dn 1 12 1 'Cmethyl NOESY' 1 13 1 'Nmethyl NOESY' 1 14 1 ccctocsynnh 1 15 1 '2D 1H-15N HSQC' 1 16 1 '2D 1H-13C HSQC aliphatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.250 _pdbx_nmr_exptl_sample_conditions.pH 5.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '50 mM sodium phosphate, 200 mM sodium chloride, 0.6 mM [U-99% 13C; U-99% 15N] protein, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 500 Varian UNITY 2 'Varian Unity' # _pdbx_nmr_refine.entry_id 2LF7 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;iteration protocol used default values except iteration6 had the violation tolerance 0.09 violation threshold 0.5 and max_contribution 15, iteration7 set the violation threshold 0.07 violation threshold 0.4 max_contributions 10. iteration 8 set the violation tolerance 0.05 violation threshold 0.3 max_contributions 5. The chemical shift tolerances were set to proton1=0.03 hetero1=0.4 proton2=0.3 and hetero2= 0.4. Violated restraints used in the calcuation were examined manually for correct identification as were restraints not used in the calculation over 3 angstroms. Long, medium, and short NOEs not used in the calcualtion were examined on refinement as were ambigous assigments with 3 or more contributions. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LF7 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0.05 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.22 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LF7 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 2.3 1 'Cornilescu, Delaglio and Bax' 'geometry optimization' TALOS+ ? 2 Goddard 'data analysis' Sparky ? 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 4 ;Linge, O'Donoghue and Nilges ; refinement ARIA ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LF7 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LF7 _struct.title 'Intramolecular regulation of the ETS Domain within ETV6 sequence R335 to Q436' _struct.pdbx_model_details 'closest to the average, model 5' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LF7 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'auto-inhibition, TRANSCRIPTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 6 ? SER A 16 ? LEU A 336 SER A 346 1 ? 11 HELX_P HELX_P2 2 ASP A 17 ? GLU A 21 ? ASP A 347 GLU A 351 5 ? 5 HELX_P HELX_P3 3 LYS A 29 ? SER A 31 ? LYS A 359 SER A 361 5 ? 3 HELX_P HELX_P4 4 ASP A 38 ? ASN A 51 ? ASP A 368 ASN A 381 1 ? 14 HELX_P HELX_P5 5 THR A 56 ? LEU A 70 ? THR A 386 LEU A 400 1 ? 15 HELX_P HELX_P6 6 THR A 88 ? MET A 93 ? THR A 418 MET A 423 1 ? 6 HELX_P HELX_P7 7 ARG A 99 ? GLU A 104 ? ARG A 429 GLU A 434 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 25 ? ASP A 28 ? ARG A 355 ASP A 358 A 2 ILE A 33 ? ARG A 35 ? ILE A 363 ARG A 365 A 3 LEU A 82 ? PHE A 85 ? LEU A 412 PHE A 415 A 4 ILE A 73 ? LYS A 75 ? ILE A 403 LYS A 405 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 28 ? N ASP A 358 O ILE A 33 ? O ILE A 363 A 2 3 N PHE A 34 ? N PHE A 364 O PHE A 83 ? O PHE A 413 A 3 4 O ARG A 84 ? O ARG A 414 N ARG A 74 ? N ARG A 404 # _atom_sites.entry_id 2LF7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 331 331 GLY GLY A . n A 1 2 SER 2 332 332 SER SER A . n A 1 3 HIS 3 333 333 HIS HIS A . n A 1 4 MET 4 334 334 MET MET A . n A 1 5 ARG 5 335 335 ARG ARG A . n A 1 6 LEU 6 336 336 LEU LEU A . n A 1 7 LEU 7 337 337 LEU LEU A . n A 1 8 TRP 8 338 338 TRP TRP A . n A 1 9 ASP 9 339 339 ASP ASP A . n A 1 10 TYR 10 340 340 TYR TYR A . n A 1 11 VAL 11 341 341 VAL VAL A . n A 1 12 TYR 12 342 342 TYR TYR A . n A 1 13 GLN 13 343 343 GLN GLN A . n A 1 14 LEU 14 344 344 LEU LEU A . n A 1 15 LEU 15 345 345 LEU LEU A . n A 1 16 SER 16 346 346 SER SER A . n A 1 17 ASP 17 347 347 ASP ASP A . n A 1 18 SER 18 348 348 SER SER A . n A 1 19 ARG 19 349 349 ARG ARG A . n A 1 20 TYR 20 350 350 TYR TYR A . n A 1 21 GLU 21 351 351 GLU GLU A . n A 1 22 ASN 22 352 352 ASN ASN A . n A 1 23 PHE 23 353 353 PHE PHE A . n A 1 24 ILE 24 354 354 ILE ILE A . n A 1 25 ARG 25 355 355 ARG ARG A . n A 1 26 TRP 26 356 356 TRP TRP A . n A 1 27 GLU 27 357 357 GLU GLU A . n A 1 28 ASP 28 358 358 ASP ASP A . n A 1 29 LYS 29 359 359 LYS LYS A . n A 1 30 GLU 30 360 360 GLU GLU A . n A 1 31 SER 31 361 361 SER SER A . n A 1 32 LYS 32 362 362 LYS LYS A . n A 1 33 ILE 33 363 363 ILE ILE A . n A 1 34 PHE 34 364 364 PHE PHE A . n A 1 35 ARG 35 365 365 ARG ARG A . n A 1 36 ILE 36 366 366 ILE ILE A . n A 1 37 VAL 37 367 367 VAL VAL A . n A 1 38 ASP 38 368 368 ASP ASP A . n A 1 39 PRO 39 369 369 PRO PRO A . n A 1 40 ASN 40 370 370 ASN ASN A . n A 1 41 GLY 41 371 371 GLY GLY A . n A 1 42 LEU 42 372 372 LEU LEU A . n A 1 43 ALA 43 373 373 ALA ALA A . n A 1 44 ARG 44 374 374 ARG ARG A . n A 1 45 LEU 45 375 375 LEU LEU A . n A 1 46 TRP 46 376 376 TRP TRP A . n A 1 47 GLY 47 377 377 GLY GLY A . n A 1 48 ASN 48 378 378 ASN ASN A . n A 1 49 HIS 49 379 379 HIS HIS A . n A 1 50 LYS 50 380 380 LYS LYS A . n A 1 51 ASN 51 381 381 ASN ASN A . n A 1 52 ARG 52 382 382 ARG ARG A . n A 1 53 THR 53 383 383 THR THR A . n A 1 54 ASN 54 384 384 ASN ASN A . n A 1 55 MET 55 385 385 MET MET A . n A 1 56 THR 56 386 386 THR THR A . n A 1 57 TYR 57 387 387 TYR TYR A . n A 1 58 GLU 58 388 388 GLU GLU A . n A 1 59 LYS 59 389 389 LYS LYS A . n A 1 60 MET 60 390 390 MET MET A . n A 1 61 SER 61 391 391 SER SER A . n A 1 62 ARG 62 392 392 ARG ARG A . n A 1 63 ALA 63 393 393 ALA ALA A . n A 1 64 LEU 64 394 394 LEU LEU A . n A 1 65 ARG 65 395 395 ARG ARG A . n A 1 66 HIS 66 396 396 HIS HIS A . n A 1 67 TYR 67 397 397 TYR TYR A . n A 1 68 TYR 68 398 398 TYR TYR A . n A 1 69 LYS 69 399 399 LYS LYS A . n A 1 70 LEU 70 400 400 LEU LEU A . n A 1 71 ASN 71 401 401 ASN ASN A . n A 1 72 ILE 72 402 402 ILE ILE A . n A 1 73 ILE 73 403 403 ILE ILE A . n A 1 74 ARG 74 404 404 ARG ARG A . n A 1 75 LYS 75 405 405 LYS LYS A . n A 1 76 GLU 76 406 406 GLU GLU A . n A 1 77 PRO 77 407 407 PRO PRO A . n A 1 78 GLY 78 408 408 GLY GLY A . n A 1 79 GLN 79 409 409 GLN GLN A . n A 1 80 ARG 80 410 410 ARG ARG A . n A 1 81 LEU 81 411 411 LEU LEU A . n A 1 82 LEU 82 412 412 LEU LEU A . n A 1 83 PHE 83 413 413 PHE PHE A . n A 1 84 ARG 84 414 414 ARG ARG A . n A 1 85 PHE 85 415 415 PHE PHE A . n A 1 86 MET 86 416 416 MET MET A . n A 1 87 LYS 87 417 417 LYS LYS A . n A 1 88 THR 88 418 418 THR THR A . n A 1 89 PRO 89 419 419 PRO PRO A . n A 1 90 ASP 90 420 420 ASP ASP A . n A 1 91 GLU 91 421 421 GLU GLU A . n A 1 92 ILE 92 422 422 ILE ILE A . n A 1 93 MET 93 423 423 MET MET A . n A 1 94 SER 94 424 424 SER SER A . n A 1 95 GLY 95 425 425 GLY GLY A . n A 1 96 ARG 96 426 426 ARG ARG A . n A 1 97 THR 97 427 427 THR THR A . n A 1 98 ASP 98 428 428 ASP ASP A . n A 1 99 ARG 99 429 429 ARG ARG A . n A 1 100 LEU 100 430 430 LEU LEU A . n A 1 101 GLU 101 431 431 GLU GLU A . n A 1 102 HIS 102 432 432 HIS HIS A . n A 1 103 LEU 103 433 433 LEU LEU A . n A 1 104 GLU 104 434 434 GLU GLU A . n A 1 105 SER 105 435 435 SER SER A . n A 1 106 GLN 106 436 436 GLN GLN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2012-07-25 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium phosphate-1' 50 ? mM ? 1 'sodium chloride-2' 200 ? mM ? 1 protein-3 0.6 ? mM '[U-99% 13C; U-99% 15N]' 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2LF7 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 3787 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 1397 _pdbx_nmr_constraints.NOE_long_range_total_count 1003 _pdbx_nmr_constraints.NOE_medium_range_total_count 665 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 712 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 84 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 84 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ1 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.54 2 1 HE A ARG 382 ? ? OXT A GLN 436 ? ? 1.60 3 2 HG2 A GLU 406 ? ? HB3 A LEU 412 ? ? 1.20 4 2 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.29 5 2 HG A SER 348 ? ? OE2 A GLU 351 ? ? 1.58 6 3 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.24 7 3 HZ1 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.52 8 4 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.22 9 4 OE1 A GLN 409 ? ? HH21 A ARG 410 ? ? 1.60 10 5 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.21 11 6 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.21 12 6 HZ2 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.57 13 6 O A LEU 336 ? ? H A TYR 340 ? ? 1.58 14 7 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.35 15 7 HZ3 A LYS 405 ? ? O A ARG 410 ? ? 1.58 16 8 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.23 17 8 HG3 A ARG 410 ? ? H A LEU 411 ? ? 1.33 18 9 HE21 A GLN 409 ? ? HB2 A LEU 412 ? ? 1.23 19 10 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.26 20 10 HZ2 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.54 21 11 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.23 22 11 HZ1 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.56 23 12 HZ2 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.54 24 13 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.29 25 13 HZ3 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.57 26 13 O A LEU 336 ? ? H A TYR 340 ? ? 1.59 27 13 HG A SER 348 ? ? OE2 A GLU 351 ? ? 1.60 28 15 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.28 29 15 HZ3 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.53 30 15 HE A ARG 335 ? ? OD2 A ASP 339 ? ? 1.57 31 16 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.27 32 16 HZ3 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.56 33 17 HG3 A ARG 410 ? ? H A LEU 411 ? ? 1.23 34 17 HZ3 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.52 35 18 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.29 36 18 HZ3 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.57 37 19 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.26 38 20 HB3 A LYS 362 ? ? HB2 A PHE 415 ? ? 1.20 39 20 HZ2 A LYS 405 ? ? OE2 A GLU 406 ? ? 1.52 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 402 ? ? -107.56 -65.96 2 1 ARG A 410 ? ? -86.17 -72.74 3 1 SER A 424 ? ? -87.96 38.20 4 2 MET A 334 ? ? -65.17 93.96 5 2 LEU A 336 ? ? -69.88 -179.05 6 2 ILE A 402 ? ? -105.88 -65.13 7 2 SER A 424 ? ? -85.60 37.33 8 3 HIS A 333 ? ? 69.40 -53.92 9 3 LEU A 336 ? ? -65.73 -178.13 10 3 ILE A 402 ? ? -108.29 -68.27 11 3 ARG A 410 ? ? -111.55 -70.16 12 4 SER A 332 ? ? -85.93 47.16 13 4 LEU A 336 ? ? -67.08 -175.20 14 4 ILE A 402 ? ? -101.10 -65.43 15 4 SER A 424 ? ? -80.50 31.42 16 5 ILE A 402 ? ? -107.07 -66.31 17 5 SER A 424 ? ? -94.73 38.07 18 6 ASN A 384 ? ? -88.25 32.61 19 6 ILE A 402 ? ? -106.77 -65.23 20 6 ARG A 410 ? ? -106.44 -72.10 21 6 SER A 424 ? ? -86.74 36.55 22 7 HIS A 333 ? ? 65.34 114.00 23 7 ASN A 384 ? ? -88.27 47.72 24 7 ILE A 402 ? ? -97.14 -65.62 25 7 ARG A 410 ? ? -103.73 -76.20 26 8 HIS A 333 ? ? -154.02 -37.23 27 8 MET A 334 ? ? 60.91 -83.88 28 8 ILE A 402 ? ? -109.08 -67.95 29 8 SER A 424 ? ? -82.98 36.44 30 9 LEU A 336 ? ? -67.13 -178.03 31 9 ASN A 384 ? ? -93.08 48.12 32 9 ILE A 402 ? ? -100.32 -63.32 33 9 GLU A 431 ? ? -49.45 -15.13 34 10 ILE A 402 ? ? -106.11 -66.02 35 10 ARG A 410 ? ? -97.34 -61.46 36 11 SER A 332 ? ? 64.58 -94.07 37 11 MET A 334 ? ? -91.90 56.93 38 11 ILE A 402 ? ? -105.49 -62.50 39 11 ARG A 410 ? ? -108.08 -74.51 40 11 SER A 424 ? ? -84.65 38.67 41 12 ASN A 384 ? ? -89.77 34.64 42 12 ILE A 402 ? ? -103.19 -70.01 43 12 ARG A 410 ? ? -102.50 -76.60 44 12 SER A 424 ? ? -79.34 38.81 45 13 SER A 332 ? ? -161.97 -22.55 46 13 MET A 334 ? ? -105.20 45.62 47 13 ASN A 384 ? ? -93.06 41.67 48 13 ILE A 402 ? ? -108.07 -67.42 49 14 HIS A 333 ? ? 61.46 -91.38 50 14 LEU A 336 ? ? -69.31 -177.76 51 14 ASN A 384 ? ? -85.55 48.68 52 14 ARG A 410 ? ? -107.20 -76.83 53 14 SER A 424 ? ? -90.06 34.87 54 15 MET A 334 ? ? -129.07 -70.75 55 15 ILE A 402 ? ? -105.18 -66.49 56 15 ARG A 410 ? ? -97.12 -68.65 57 15 SER A 424 ? ? -86.23 37.09 58 16 ILE A 402 ? ? -108.34 -70.14 59 16 ARG A 410 ? ? -95.83 -76.04 60 16 SER A 424 ? ? -77.53 27.47 61 17 HIS A 333 ? ? -87.24 42.16 62 17 ASN A 384 ? ? -90.10 43.39 63 17 ILE A 402 ? ? -106.04 -66.56 64 17 ARG A 410 ? ? -97.01 -75.48 65 18 MET A 334 ? ? 69.49 139.97 66 18 ASN A 384 ? ? -93.47 53.18 67 18 ILE A 402 ? ? -103.39 -68.91 68 18 SER A 424 ? ? -83.74 38.42 69 19 ILE A 402 ? ? -101.28 -63.49 70 19 ARG A 410 ? ? -108.54 -74.51 71 20 MET A 334 ? ? 72.21 129.82 72 20 ASN A 384 ? ? 74.47 -17.09 73 20 ILE A 402 ? ? -100.26 -65.99 74 20 ARG A 410 ? ? -101.35 -75.53 #