HEADER METAL BINDING PROTEIN 30-JUN-11 2LFI TITLE SOLUTION NMR STRUCTURE OF A MUCBP DOMAIN (FRAGMENT 187-294) OF THE TITLE 2 PROTEIN LBA1460 FROM LACTOBACILLUS ACIDOPHILUS, NORTHEAST STRUCTURAL TITLE 3 GENOMICS CONSORTIUM TARGET LAR80A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN LBA1460; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS ACIDOPHILUS; SOURCE 3 ORGANISM_TAXID: 1579; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR: PET 21-23C KEYWDS NESG, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, PUTATIVE ZN BINDING, KEYWDS 2 STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, METAL KEYWDS 3 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR E.A.FELDMANN,T.A.RAMELOT,Y.YANG,H.LEE,C.CICCOSANTI,H.JANJUA,R.NAIR, AUTHOR 2 T.B.ACTON,R.XIAO,J.K.EVERETT,J.H.PRESTEGARD,G.T.MONTELIONE, AUTHOR 3 M.A.KENNEDY,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 01-MAY-24 2LFI 1 REMARK REVDAT 2 22-FEB-12 2LFI 1 KEYWDS REVDAT 1 01-FEB-12 2LFI 0 JRNL AUTH E.A.FELDMANN,T.A.RAMELOT,Y.A.YANG,H.WANG,C.CICCOSANTI, JRNL AUTH 2 H.JANJUA,R.NAIR,T.B.ACTON,R.XIAO,J.K.EVERETT,G.T.MONTELIONE, JRNL AUTH 3 M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF A MUCBP DOMAIN (FRAGMENT 187-294) JRNL TITL 2 OF THE PROTEIN LBA1460 FROM LACTOBACILLUS ACIDOPHILUS, JRNL TITL 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET LAR80A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2008, CNS 1.2, PSVS 1.4 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS), BHATTACHARYA AND MONTELIONE (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS WATER REFINEMENT REMARK 4 REMARK 4 2LFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000102328. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 0.02 % SODIUM AZIDE, REMARK 210 10 MM DTT, 90% H2O/10% D2O; 1.2 REMARK 210 MM U-100% 15N AND 5% 13C REMARK 210 BIOSYNTHETICALLY DIRECTED REMARK 210 PROTEIN, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORID, 10 MM DTT, 0.02 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 0.02 % SODIUM AZIDE, REMARK 210 10 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-13C HSQC-CT; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NUS REMARK 210 NOESY_ALIPH; 3D HNCO; 3D HNCACB; REMARK 210 3D CBCA(CO)NH; 3D 1H-13C NOESY_ REMARK 210 AROM; 3D HN(CO)CA; 3D HBHA(CO)NH; REMARK 210 3D C(CCO)NH; 3D HCCH-COSY; 3D REMARK 210 HCCH-TOCSY; 3D CCH-TOCSY; 4D CC- REMARK 210 NOESY; 2D 1H-15N HSQC_HIS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, TOPSPIN 2.1.4, REMARK 210 AUTOSTRUCTURE 2.2.1, X-PLOR NIH REMARK 210 2.25, SPARKY 3.113, PDBSTAT 5.1, REMARK 210 PINE SERVER 1.0, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 26 116.59 -177.11 REMARK 500 1 ASP A 28 77.26 -106.79 REMARK 500 1 GLU A 61 -164.70 -167.03 REMARK 500 1 PRO A 64 -165.13 -70.66 REMARK 500 1 SER A 65 106.52 -164.65 REMARK 500 1 ARG A 96 -52.83 -132.68 REMARK 500 1 LYS A 111 90.92 -66.69 REMARK 500 1 GLU A 116 101.71 66.64 REMARK 500 1 HIS A 117 107.03 -53.47 REMARK 500 2 ASP A 27 -153.33 -87.72 REMARK 500 2 ASP A 28 91.47 -55.89 REMARK 500 2 PRO A 64 92.35 -64.69 REMARK 500 2 GLN A 94 45.48 -104.36 REMARK 500 2 LYS A 112 -55.57 -160.23 REMARK 500 2 GLU A 116 -79.64 65.72 REMARK 500 2 HIS A 117 -48.23 -169.04 REMARK 500 2 HIS A 118 85.80 56.54 REMARK 500 3 ASP A 27 82.00 -161.62 REMARK 500 3 ASP A 28 -3.86 -171.76 REMARK 500 3 GLU A 61 -163.47 -170.09 REMARK 500 3 PRO A 80 90.49 -64.52 REMARK 500 3 GLN A 94 41.65 -84.65 REMARK 500 3 ASN A 105 -141.31 -69.45 REMARK 500 3 THR A 106 -9.90 -54.93 REMARK 500 3 LYS A 112 -84.83 -80.74 REMARK 500 3 ASP A 113 -170.14 166.59 REMARK 500 4 HIS A 26 103.68 -168.49 REMARK 500 4 PRO A 80 78.73 -31.75 REMARK 500 4 GLN A 109 87.27 -64.12 REMARK 500 4 ASP A 113 -167.47 57.18 REMARK 500 4 HIS A 121 -52.49 -149.10 REMARK 500 5 HIS A 26 90.03 -176.99 REMARK 500 5 ASP A 27 41.08 -98.62 REMARK 500 5 ASP A 28 16.46 -152.99 REMARK 500 5 GLU A 61 -159.95 -168.41 REMARK 500 5 PRO A 80 29.48 -72.38 REMARK 500 5 ASP A 81 -72.47 69.90 REMARK 500 5 ALA A 104 108.89 -50.09 REMARK 500 5 ASN A 110 -66.11 -107.04 REMARK 500 5 LYS A 112 -41.82 -172.03 REMARK 500 5 ASP A 113 -174.34 66.78 REMARK 500 5 LEU A 115 -9.45 73.41 REMARK 500 5 GLU A 116 -170.66 68.57 REMARK 500 6 ASP A 27 29.44 -153.75 REMARK 500 6 GLN A 94 23.36 -141.71 REMARK 500 6 LEU A 115 -70.35 -79.00 REMARK 500 6 GLU A 116 107.94 54.74 REMARK 500 6 HIS A 118 87.97 -62.83 REMARK 500 7 GLU A 61 -162.35 -168.64 REMARK 500 7 LYS A 112 -48.08 -140.75 REMARK 500 REMARK 500 THIS ENTRY HAS 177 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17754 RELATED DB: BMRB REMARK 900 RELATED ID: LAR80A RELATED DB: TARGETDB DBREF 2LFI A 1 122 PDB 2LFI 2LFI 1 122 SEQRES 1 A 122 MET ILE GLU PRO ILE LYS ARG THR GLN VAL VAL THR GLN SEQRES 2 A 122 THR ILE HIS TYR ARG TYR GLU ASP GLY ALA VAL ALA HIS SEQRES 3 A 122 ASP ASP HIS VAL VAL SER LEU ILE PHE THR GLN SER GLY SEQRES 4 A 122 LYS ARG ASP LEU THR ASN GLY LYS GLU ILE TRP ASP SER SEQRES 5 A 122 LYS TRP SER LEU THR GLN THR PHE GLU ALA LEU PRO SER SEQRES 6 A 122 PRO VAL ILE ILE GLY TYR THR ALA ASP LYS PRO MET VAL SEQRES 7 A 122 GLY PRO ASP GLU VAL THR VAL ASP SER LYS ASN PHE LEU SEQRES 8 A 122 ASP LYS GLN ASN ARG GLU GLU THR VAL ILE TYR SER ALA SEQRES 9 A 122 ASN THR ILE THR GLN ASN LYS LYS ASP GLY LEU GLU HIS SEQRES 10 A 122 HIS HIS HIS HIS HIS SHEET 1 A 5 GLU A 48 TRP A 50 0 SHEET 2 A 5 VAL A 24 ASP A 42 -1 N LYS A 40 O ILE A 49 SHEET 3 A 5 ILE A 2 TYR A 19 -1 N ARG A 7 O GLN A 37 SHEET 4 A 5 GLU A 97 ALA A 104 1 O TYR A 102 N ARG A 18 SHEET 5 A 5 TYR A 71 ALA A 73 -1 N THR A 72 O SER A 103 SHEET 1 B 2 SER A 55 PHE A 60 0 SHEET 2 B 2 ASP A 81 ASP A 86 -1 O ASP A 81 N PHE A 60 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1