HEADER ANTIMICROBIAL PROTEIN 21-JUL-11 2LG5 TITLE NMR STRUCTURE OF CHICKEN AVBD2 DEFENSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALLINACIN-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAL-2, BETA-DEFENSIN 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 4 ORGANISM_COMMON: BANTAM,CHICKENS; SOURCE 5 ORGANISM_TAXID: 9031 KEYWDS ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR H.MEUDAL,C.LANDON REVDAT 3 09-OCT-24 2LG5 1 REMARK REVDAT 2 14-JUN-23 2LG5 1 REMARK REVDAT 1 25-APR-12 2LG5 0 JRNL AUTH C.DERACHE,H.MEUDAL,V.AUCAGNE,K.J.MARK,M.CADENE,A.F.DELMAS, JRNL AUTH 2 A.C.LALMANACH,C.LANDON JRNL TITL INITIAL INSIGHTS INTO STRUCTURE-ACTIVITY RELATIONSHIPS OF JRNL TITL 2 AVIAN DEFENSINS. JRNL REF J.BIOL.CHEM. V. 287 7746 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22205704 JRNL DOI 10.1074/JBC.M111.312108 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.1, ARIA 1.1 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE, REMARK 3 O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000102351. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 4.1 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.1 MM CHICKEN AVBD2 DEFENSIN, REMARK 210 90% H2O/10% D2O; 0.1 MM CHICKEN REMARK 210 AVBD2 DEFENSIN, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H COSY; 2D 1H-1H TOCSY; REMARK 210 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 2 -84.37 -89.99 REMARK 500 1 CYS A 3 -170.14 -59.35 REMARK 500 1 HIS A 9 75.33 -64.39 REMARK 500 1 CYS A 13 165.08 173.87 REMARK 500 1 SER A 15 -157.46 -166.45 REMARK 500 1 VAL A 20 34.06 -146.93 REMARK 500 1 SER A 22 144.85 -174.91 REMARK 500 1 CYS A 23 -140.57 -94.32 REMARK 500 1 TRP A 34 46.09 -78.10 REMARK 500 1 ASN A 35 43.76 -154.14 REMARK 500 2 HIS A 9 76.25 -58.26 REMARK 500 2 SER A 15 43.75 -150.50 REMARK 500 2 LYS A 19 99.63 -64.88 REMARK 500 2 PHE A 26 40.12 -105.19 REMARK 500 2 ARG A 27 58.07 -158.10 REMARK 500 3 CYS A 3 -32.21 70.39 REMARK 500 3 CYS A 13 152.91 170.48 REMARK 500 3 SER A 15 49.13 -175.46 REMARK 500 3 HIS A 16 -70.62 63.25 REMARK 500 3 LEU A 17 -134.01 66.92 REMARK 500 3 LYS A 19 79.23 -61.74 REMARK 500 3 VAL A 20 42.98 -77.25 REMARK 500 3 CYS A 23 -142.97 -84.99 REMARK 500 3 ARG A 27 83.22 -64.74 REMARK 500 3 PRO A 33 20.00 -63.54 REMARK 500 3 TRP A 34 40.72 -77.45 REMARK 500 3 ASN A 35 113.97 -171.61 REMARK 500 4 PHE A 2 -99.75 -70.31 REMARK 500 4 CYS A 3 109.80 -37.87 REMARK 500 4 LYS A 4 42.09 34.64 REMARK 500 4 HIS A 9 85.57 -52.64 REMARK 500 4 SER A 15 54.89 -165.67 REMARK 500 4 SER A 22 135.38 -178.24 REMARK 500 5 PHE A 2 -52.51 -175.52 REMARK 500 5 CYS A 3 -134.31 -81.18 REMARK 500 5 LYS A 4 73.73 -69.62 REMARK 500 5 PHE A 10 40.92 -80.43 REMARK 500 5 CYS A 13 137.00 174.45 REMARK 500 5 SER A 15 -130.52 54.89 REMARK 500 5 SER A 22 -146.28 -94.93 REMARK 500 5 CYS A 23 -69.01 -177.84 REMARK 500 5 PHE A 24 141.75 -178.85 REMARK 500 5 TRP A 34 40.24 -81.83 REMARK 500 5 ASN A 35 48.32 -74.74 REMARK 500 6 PHE A 2 66.08 -65.80 REMARK 500 6 CYS A 3 35.50 163.59 REMARK 500 6 LYS A 4 38.47 37.99 REMARK 500 6 SER A 7 109.92 -52.77 REMARK 500 6 HIS A 9 75.52 -59.54 REMARK 500 6 PHE A 10 43.18 -73.79 REMARK 500 REMARK 500 THIS ENTRY HAS 93 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17797 RELATED DB: BMRB REMARK 900 RELATED ID: 2LG6 RELATED DB: PDB REMARK 900 K31A MUTANT DBREF 2LG5 A 1 36 UNP P46158 GLL2_CHICK 29 64 SEQRES 1 A 36 LEU PHE CYS LYS GLY GLY SER CYS HIS PHE GLY GLY CYS SEQRES 2 A 36 PRO SER HIS LEU ILE LYS VAL GLY SER CYS PHE GLY PHE SEQRES 3 A 36 ARG SER CYS CYS LYS TRP PRO TRP ASN ALA SHEET 1 A 3 SER A 7 CYS A 8 0 SHEET 2 A 3 SER A 28 LYS A 31 -1 O CYS A 30 N SER A 7 SHEET 3 A 3 ILE A 18 SER A 22 -1 N VAL A 20 O CYS A 29 SSBOND 1 CYS A 3 CYS A 29 1555 1555 2.03 SSBOND 2 CYS A 8 CYS A 23 1555 1555 2.03 SSBOND 3 CYS A 13 CYS A 30 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1