data_2LGD # _entry.id 2LGD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LGD pdb_00002lgd 10.2210/pdb2lgd/pdb RCSB RCSB102359 ? ? BMRB 17805 ? ? WWPDB D_1000102359 ? ? # _pdbx_database_related.db_id 17805 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LGD _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-07-25 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, W.' 1 'Ko, S.' 2 # _citation.id primary _citation.title 'The High Resolution Structure of Ubiquitin Like Dom Ublcp1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, N.' 1 ? primary 'Ko, S.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ubiquitin-like domain-containing CTD phosphatase 1' _entity.formula_weight 9141.800 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.1.3.16 _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-TERMINAL DOMAIN (UNP RESIDUES 1-81)' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMALPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTR EES ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMALPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTR EES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 LEU n 1 6 PRO n 1 7 ILE n 1 8 ILE n 1 9 VAL n 1 10 LYS n 1 11 TRP n 1 12 GLY n 1 13 GLY n 1 14 GLN n 1 15 GLU n 1 16 TYR n 1 17 SER n 1 18 VAL n 1 19 THR n 1 20 THR n 1 21 LEU n 1 22 SER n 1 23 GLU n 1 24 ASP n 1 25 ASP n 1 26 THR n 1 27 VAL n 1 28 LEU n 1 29 ASP n 1 30 LEU n 1 31 LYS n 1 32 GLN n 1 33 PHE n 1 34 LEU n 1 35 LYS n 1 36 THR n 1 37 LEU n 1 38 THR n 1 39 GLY n 1 40 VAL n 1 41 LEU n 1 42 PRO n 1 43 GLU n 1 44 ARG n 1 45 GLN n 1 46 LYS n 1 47 LEU n 1 48 LEU n 1 49 GLY n 1 50 LEU n 1 51 LYS n 1 52 VAL n 1 53 LYS n 1 54 GLY n 1 55 LYS n 1 56 PRO n 1 57 ALA n 1 58 GLU n 1 59 ASN n 1 60 ASP n 1 61 VAL n 1 62 LYS n 1 63 LEU n 1 64 GLY n 1 65 ALA n 1 66 LEU n 1 67 LYS n 1 68 LEU n 1 69 LYS n 1 70 PRO n 1 71 ASN n 1 72 THR n 1 73 LYS n 1 74 ILE n 1 75 MET n 1 76 MET n 1 77 MET n 1 78 GLY n 1 79 THR n 1 80 ARG n 1 81 GLU n 1 82 GLU n 1 83 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene UBLCP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type VECTOR _entity_src_gen.pdbx_host_org_vector 'PGEX 4T-1' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBCP1_HUMAN _struct_ref.pdbx_db_accession Q8WVY7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MALPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREE S ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LGD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 83 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8WVY7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 81 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 81 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2LGD GLY A 1 ? UNP Q8WVY7 ? ? 'expression tag' -1 1 1 2LGD SER A 2 ? UNP Q8WVY7 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 3 '3D CBCA(CO)NH' 1 3 3 '3D HNCO' 1 4 3 '3D HNCA' 1 5 3 '3D HNCACB' 1 6 3 '3D HBHA(CO)NH' 1 7 2 '3D HCCH-TOCSY' 1 8 1 '3D 1 15N NOESY' 1 9 2 '3D 1H-13C NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1.5 mM [U-99% 15N] UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-1, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1.5 mM [U-95% 13C] UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-2, 100% D2O' 2 '100% D2O' '1.5 mM [U-95% 13C; U-95% 15N] UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-3, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'BRUKER DRX' # _pdbx_nmr_refine.entry_id 2LGD _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LGD _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LGD _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Zimmerman, Moseley, Kulikowski and Montelione' 'chemical shift assignment' AutoAssign 1 ? 'Koradi, Billeter and Wuthrich' 'data analysis' MOLMOL_NMRDRAW 2 ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 3 ? 'Laskowski and MacArthur' refinement PROCHECKNMR 4 ? Goddard 'chemical shift assignment' Sparky 5 ? Goddard 'peak picking' Sparky 6 ? 'Bruker Biospin' processing XwinNMR 7 ? 'Cornilescu, Delaglio and Bax' 'structure solution' TALOS 8 ? 'P.GUNTERT ET AL.' refinement CYANA 9 2.2.5 'P.GUNTERT ET AL.' 'structure solution' CYANA 10 2.2.5 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRDraw 11 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LGD _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LGD _struct.title 'The high resolution structure of ubiquitin like domain of UBLCP1' _struct.pdbx_model_details 'minimized average structure, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2LGD _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'UBIQUITIN LIKE DOMAIN, UBLCP1, RNA POLYMERASE II, HYDROLASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 26 ? GLY A 39 ? THR A 24 GLY A 37 1 ? 14 HELX_P HELX_P2 2 LYS A 62 ? LYS A 67 ? LYS A 60 LYS A 65 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 14 ? VAL A 18 ? GLN A 12 VAL A 16 A 2 ILE A 7 ? TRP A 11 ? ILE A 5 TRP A 9 A 3 LYS A 73 ? MET A 77 ? LYS A 71 MET A 75 A 4 LYS A 46 ? LEU A 47 ? LYS A 44 LEU A 45 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 16 ? O TYR A 14 N VAL A 9 ? N VAL A 7 A 2 3 N ILE A 8 ? N ILE A 6 O ILE A 74 ? O ILE A 72 A 3 4 O MET A 77 ? O MET A 75 N LYS A 46 ? N LYS A 44 # _atom_sites.entry_id 2LGD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 ALA 4 2 2 ALA ALA A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 PRO 6 4 4 PRO PRO A . n A 1 7 ILE 7 5 5 ILE ILE A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 VAL 9 7 7 VAL VAL A . n A 1 10 LYS 10 8 8 LYS LYS A . n A 1 11 TRP 11 9 9 TRP TRP A . n A 1 12 GLY 12 10 10 GLY GLY A . n A 1 13 GLY 13 11 11 GLY GLY A . n A 1 14 GLN 14 12 12 GLN GLN A . n A 1 15 GLU 15 13 13 GLU GLU A . n A 1 16 TYR 16 14 14 TYR TYR A . n A 1 17 SER 17 15 15 SER SER A . n A 1 18 VAL 18 16 16 VAL VAL A . n A 1 19 THR 19 17 17 THR THR A . n A 1 20 THR 20 18 18 THR THR A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 SER 22 20 20 SER SER A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 ASP 24 22 22 ASP ASP A . n A 1 25 ASP 25 23 23 ASP ASP A . n A 1 26 THR 26 24 24 THR THR A . n A 1 27 VAL 27 25 25 VAL VAL A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 ASP 29 27 27 ASP ASP A . n A 1 30 LEU 30 28 28 LEU LEU A . n A 1 31 LYS 31 29 29 LYS LYS A . n A 1 32 GLN 32 30 30 GLN GLN A . n A 1 33 PHE 33 31 31 PHE PHE A . n A 1 34 LEU 34 32 32 LEU LEU A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 THR 36 34 34 THR THR A . n A 1 37 LEU 37 35 35 LEU LEU A . n A 1 38 THR 38 36 36 THR THR A . n A 1 39 GLY 39 37 37 GLY GLY A . n A 1 40 VAL 40 38 38 VAL VAL A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 PRO 42 40 40 PRO PRO A . n A 1 43 GLU 43 41 41 GLU GLU A . n A 1 44 ARG 44 42 42 ARG ARG A . n A 1 45 GLN 45 43 43 GLN GLN A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 LEU 47 45 45 LEU LEU A . n A 1 48 LEU 48 46 46 LEU LEU A . n A 1 49 GLY 49 47 47 GLY GLY A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 LYS 51 49 49 LYS LYS A . n A 1 52 VAL 52 50 50 VAL VAL A . n A 1 53 LYS 53 51 51 LYS LYS A . n A 1 54 GLY 54 52 52 GLY GLY A . n A 1 55 LYS 55 53 53 LYS LYS A . n A 1 56 PRO 56 54 54 PRO PRO A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 GLU 58 56 56 GLU GLU A . n A 1 59 ASN 59 57 57 ASN ASN A . n A 1 60 ASP 60 58 58 ASP ASP A . n A 1 61 VAL 61 59 59 VAL VAL A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 LEU 63 61 61 LEU LEU A . n A 1 64 GLY 64 62 62 GLY GLY A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 LYS 67 65 65 LYS LYS A . n A 1 68 LEU 68 66 66 LEU LEU A . n A 1 69 LYS 69 67 67 LYS LYS A . n A 1 70 PRO 70 68 68 PRO PRO A . n A 1 71 ASN 71 69 69 ASN ASN A . n A 1 72 THR 72 70 70 THR THR A . n A 1 73 LYS 73 71 71 LYS LYS A . n A 1 74 ILE 74 72 72 ILE ILE A . n A 1 75 MET 75 73 73 MET MET A . n A 1 76 MET 76 74 74 MET MET A . n A 1 77 MET 77 75 75 MET MET A . n A 1 78 GLY 78 76 76 GLY GLY A . n A 1 79 THR 79 77 77 THR THR A . n A 1 80 ARG 80 78 78 ARG ARG A . n A 1 81 GLU 81 79 79 GLU GLU A . n A 1 82 GLU 82 80 80 GLU GLU A . n A 1 83 SER 83 81 81 SER SER A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-29 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-1' 1.5 ? mM '[U-99% 15N]' 1 'UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-2' 1.5 ? mM '[U-95% 13C]' 2 'UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1-3' 1.5 ? mM '[U-95% 13C; U-95% 15N]' 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 17 ? ? -155.71 48.14 2 1 THR A 18 ? ? -130.88 -34.46 3 1 ASP A 23 ? ? -82.83 -74.36 4 1 THR A 24 ? ? 176.19 149.36 5 1 PRO A 54 ? ? -69.81 64.75 6 1 ALA A 55 ? ? 49.29 84.61 7 1 GLU A 56 ? ? -52.35 172.47 8 1 LYS A 65 ? ? -48.71 -85.53 9 1 LEU A 66 ? ? 175.91 -172.26 10 2 THR A 17 ? ? -152.19 43.24 11 2 ASP A 23 ? ? -74.61 -78.53 12 2 THR A 24 ? ? 178.43 148.58 13 2 PRO A 54 ? ? -69.80 64.57 14 2 ALA A 55 ? ? 49.09 84.47 15 2 GLU A 56 ? ? -54.77 177.25 16 2 LYS A 65 ? ? -47.60 -84.71 17 2 LEU A 66 ? ? 175.71 -173.05 18 3 THR A 17 ? ? -155.69 44.96 19 3 ASP A 23 ? ? -80.94 -74.21 20 3 THR A 24 ? ? 175.33 151.09 21 3 PRO A 54 ? ? -69.83 64.65 22 3 ALA A 55 ? ? 50.67 88.26 23 3 LYS A 65 ? ? -49.91 -86.19 24 3 LEU A 66 ? ? 176.34 -172.84 25 3 GLU A 79 ? ? -57.21 170.12 26 4 THR A 17 ? ? -156.75 52.29 27 4 THR A 18 ? ? -135.58 -37.64 28 4 LEU A 19 ? ? -126.47 -168.71 29 4 ASP A 23 ? ? -82.09 -75.10 30 4 THR A 24 ? ? 176.42 148.35 31 4 PRO A 54 ? ? -69.78 64.53 32 4 ALA A 55 ? ? 49.37 80.10 33 4 LYS A 65 ? ? -49.29 -85.04 34 4 LEU A 66 ? ? 175.65 -172.71 35 5 THR A 17 ? ? -152.26 48.03 36 5 THR A 18 ? ? -130.35 -36.43 37 5 ASP A 23 ? ? -75.99 -78.41 38 5 THR A 24 ? ? 177.97 147.86 39 5 PRO A 54 ? ? -69.80 64.43 40 5 ALA A 55 ? ? 49.02 85.05 41 5 GLU A 56 ? ? -52.06 172.39 42 5 LYS A 65 ? ? -48.94 -85.51 43 5 LEU A 66 ? ? 175.08 -171.90 44 6 THR A 17 ? ? -157.20 50.26 45 6 THR A 18 ? ? -132.07 -35.91 46 6 ASP A 23 ? ? -80.22 -74.89 47 6 THR A 24 ? ? 176.44 149.08 48 6 PRO A 54 ? ? -69.80 64.52 49 6 ALA A 55 ? ? 48.16 82.51 50 6 LYS A 65 ? ? -49.37 -84.96 51 6 LEU A 66 ? ? 175.69 -173.20 52 7 THR A 17 ? ? -152.16 53.25 53 7 THR A 18 ? ? -136.06 -40.53 54 7 ASP A 23 ? ? -80.95 -78.39 55 7 THR A 24 ? ? 178.94 148.61 56 7 PRO A 54 ? ? -69.76 64.93 57 7 ALA A 55 ? ? 49.58 82.14 58 7 LYS A 65 ? ? -48.90 -85.40 59 7 LEU A 66 ? ? 175.88 -172.22 60 7 GLU A 80 ? ? -68.91 97.74 61 8 THR A 17 ? ? -153.82 50.12 62 8 THR A 18 ? ? -130.82 -37.31 63 8 ASP A 23 ? ? -80.85 -78.18 64 8 THR A 24 ? ? 178.67 150.89 65 8 LYS A 51 ? ? 59.96 19.86 66 8 PRO A 54 ? ? -69.80 65.01 67 8 ALA A 55 ? ? 49.74 86.43 68 8 LYS A 65 ? ? -50.10 -85.37 69 8 LEU A 66 ? ? 175.54 -173.16 70 9 THR A 17 ? ? -158.43 52.36 71 9 THR A 18 ? ? -134.64 -39.74 72 9 LEU A 19 ? ? -124.66 -169.26 73 9 ASP A 23 ? ? -82.36 -74.93 74 9 THR A 24 ? ? 176.02 149.50 75 9 PRO A 54 ? ? -69.65 65.17 76 9 ALA A 55 ? ? 50.72 85.60 77 9 LYS A 65 ? ? -49.28 -85.48 78 9 LEU A 66 ? ? 175.11 -172.10 79 10 THR A 17 ? ? -152.60 52.00 80 10 THR A 18 ? ? -136.16 -38.57 81 10 LEU A 19 ? ? -125.51 -169.97 82 10 ASP A 23 ? ? -80.13 -74.39 83 10 THR A 24 ? ? 175.58 148.70 84 10 PRO A 54 ? ? -69.75 64.76 85 10 ALA A 55 ? ? 49.71 81.29 86 10 GLU A 56 ? ? -49.72 165.60 87 10 LYS A 65 ? ? -48.67 -84.71 88 10 LEU A 66 ? ? 175.14 -172.27 89 11 THR A 17 ? ? -151.81 49.86 90 11 THR A 18 ? ? -133.89 -37.08 91 11 ASP A 23 ? ? -81.01 -74.15 92 11 THR A 24 ? ? 175.86 149.41 93 11 PRO A 54 ? ? -69.76 64.68 94 11 ALA A 55 ? ? 48.92 81.94 95 11 LYS A 65 ? ? -48.63 -84.78 96 11 LEU A 66 ? ? 175.83 -173.30 97 12 THR A 17 ? ? -152.52 53.59 98 12 THR A 18 ? ? -136.45 -39.40 99 12 LEU A 19 ? ? -126.03 -169.44 100 12 ASP A 23 ? ? -81.77 -74.41 101 12 THR A 24 ? ? 174.69 150.27 102 12 PRO A 54 ? ? -69.75 65.63 103 12 ALA A 55 ? ? 50.12 87.87 104 12 LYS A 65 ? ? -50.27 -85.75 105 12 LEU A 66 ? ? 176.30 -172.94 106 13 THR A 17 ? ? -154.30 45.37 107 13 ASP A 23 ? ? -77.59 -78.31 108 13 THR A 24 ? ? 178.23 148.41 109 13 PRO A 54 ? ? -69.75 64.81 110 13 ALA A 55 ? ? 49.48 82.40 111 13 LYS A 65 ? ? -49.75 -85.00 112 13 LEU A 66 ? ? 175.30 -172.62 113 14 THR A 17 ? ? -154.39 49.20 114 14 THR A 18 ? ? -132.97 -37.98 115 14 LEU A 19 ? ? -127.26 -169.62 116 14 ASP A 23 ? ? -81.01 -74.65 117 14 THR A 24 ? ? 176.10 148.42 118 14 PRO A 54 ? ? -69.74 64.83 119 14 ALA A 55 ? ? 48.49 85.13 120 14 LYS A 65 ? ? -48.56 -85.27 121 14 LEU A 66 ? ? 175.20 -172.53 122 15 THR A 17 ? ? -157.16 46.62 123 15 ASP A 23 ? ? -81.14 -73.88 124 15 THR A 24 ? ? 175.56 149.15 125 15 LYS A 51 ? ? 59.71 19.74 126 15 PRO A 54 ? ? -69.77 64.43 127 15 ALA A 55 ? ? 49.00 86.51 128 15 GLU A 56 ? ? -51.43 170.45 129 15 LYS A 65 ? ? -49.31 -85.61 130 15 LEU A 66 ? ? 175.36 -172.45 131 16 THR A 17 ? ? -153.74 40.69 132 16 ASP A 23 ? ? -75.35 -79.30 133 16 THR A 24 ? ? 178.74 148.89 134 16 PRO A 54 ? ? -69.76 64.87 135 16 ALA A 55 ? ? 48.83 84.16 136 16 LYS A 65 ? ? -48.85 -84.99 137 16 LEU A 66 ? ? 174.52 -171.83 138 17 THR A 17 ? ? -154.09 49.96 139 17 THR A 18 ? ? -132.42 -37.76 140 17 LEU A 19 ? ? -129.26 -169.84 141 17 ASP A 23 ? ? -81.82 -73.78 142 17 THR A 24 ? ? 176.37 151.35 143 17 PRO A 54 ? ? -69.77 64.58 144 17 ALA A 55 ? ? 48.47 84.52 145 17 GLU A 56 ? ? -51.88 170.84 146 17 LYS A 65 ? ? -48.43 -85.20 147 17 LEU A 66 ? ? 175.09 -171.74 148 18 THR A 17 ? ? -158.29 51.60 149 18 THR A 18 ? ? -132.98 -35.79 150 18 ASP A 23 ? ? -82.89 -74.73 151 18 THR A 24 ? ? 174.88 148.16 152 18 LEU A 48 ? ? -178.98 145.88 153 18 PRO A 54 ? ? -69.79 64.62 154 18 ALA A 55 ? ? 51.90 89.64 155 18 GLU A 56 ? ? -52.28 172.43 156 18 LYS A 65 ? ? -48.37 -86.29 157 18 LEU A 66 ? ? 175.17 -171.95 158 19 THR A 17 ? ? -155.99 53.03 159 19 THR A 18 ? ? -135.88 -37.14 160 19 LEU A 19 ? ? -127.64 -169.18 161 19 ASP A 23 ? ? -82.62 -74.78 162 19 THR A 24 ? ? 176.97 150.30 163 19 LEU A 46 ? ? -51.13 108.20 164 19 PRO A 54 ? ? -69.80 65.22 165 19 ALA A 55 ? ? 48.49 80.68 166 19 GLU A 56 ? ? -49.96 156.82 167 19 LYS A 65 ? ? -49.62 -85.05 168 19 LEU A 66 ? ? 175.41 -172.36 169 20 THR A 17 ? ? -157.61 46.18 170 20 ASP A 23 ? ? -81.60 -74.07 171 20 THR A 24 ? ? 174.83 151.16 172 20 PRO A 54 ? ? -69.76 65.77 173 20 ALA A 55 ? ? 51.22 88.96 174 20 LYS A 65 ? ? -50.01 -86.06 175 20 LEU A 66 ? ? 176.32 -172.58 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 2 Y 1 A GLY -1 ? A GLY 1 4 2 Y 1 A SER 0 ? A SER 2 5 3 Y 1 A GLY -1 ? A GLY 1 6 3 Y 1 A SER 0 ? A SER 2 7 4 Y 1 A GLY -1 ? A GLY 1 8 4 Y 1 A SER 0 ? A SER 2 9 5 Y 1 A GLY -1 ? A GLY 1 10 5 Y 1 A SER 0 ? A SER 2 11 6 Y 1 A GLY -1 ? A GLY 1 12 6 Y 1 A SER 0 ? A SER 2 13 7 Y 1 A GLY -1 ? A GLY 1 14 7 Y 1 A SER 0 ? A SER 2 15 8 Y 1 A GLY -1 ? A GLY 1 16 8 Y 1 A SER 0 ? A SER 2 17 9 Y 1 A GLY -1 ? A GLY 1 18 9 Y 1 A SER 0 ? A SER 2 19 10 Y 1 A GLY -1 ? A GLY 1 20 10 Y 1 A SER 0 ? A SER 2 21 11 Y 1 A GLY -1 ? A GLY 1 22 11 Y 1 A SER 0 ? A SER 2 23 12 Y 1 A GLY -1 ? A GLY 1 24 12 Y 1 A SER 0 ? A SER 2 25 13 Y 1 A GLY -1 ? A GLY 1 26 13 Y 1 A SER 0 ? A SER 2 27 14 Y 1 A GLY -1 ? A GLY 1 28 14 Y 1 A SER 0 ? A SER 2 29 15 Y 1 A GLY -1 ? A GLY 1 30 15 Y 1 A SER 0 ? A SER 2 31 16 Y 1 A GLY -1 ? A GLY 1 32 16 Y 1 A SER 0 ? A SER 2 33 17 Y 1 A GLY -1 ? A GLY 1 34 17 Y 1 A SER 0 ? A SER 2 35 18 Y 1 A GLY -1 ? A GLY 1 36 18 Y 1 A SER 0 ? A SER 2 37 19 Y 1 A GLY -1 ? A GLY 1 38 19 Y 1 A SER 0 ? A SER 2 39 20 Y 1 A GLY -1 ? A GLY 1 40 20 Y 1 A SER 0 ? A SER 2 #