HEADER    DNA BINDING PROTEIN, CHAPERONE          09-NOV-11   2LLH              
TITLE     NMR STRUCTURE OF NPM1_C70                                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NUCLEOPHOSMIN;                                             
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: NUCLEOLAR LOCALIZATION REGION RESIDUES 225-294;            
COMPND   5 SYNONYM: NPM, NUCLEOLAR PHOSPHOPROTEIN B23, NUCLEOLAR PROTEIN NO38,  
COMPND   6 NUMATRIN;                                                            
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NPM1, NPM;                                                     
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PET28+(A)                                  
KEYWDS    NUCLEOLAR, CHAPERONE, ONCOPROTEIN, DNA BINDING PROTEIN                
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    L.BANCI,I.BERTINI,M.BRUNORI,A.DI MATTEO,L.FEDERICI,A.GALLO,C.LO       
AUTHOR   2 STERZO,M.MORI                                                        
REVDAT   4   15-MAY-24 2LLH    1       REMARK                                   
REVDAT   3   14-JUN-23 2LLH    1       REMARK SEQADV                            
REVDAT   2   22-AUG-12 2LLH    1       JRNL                                     
REVDAT   1   27-JUN-12 2LLH    0                                                
JRNL        AUTH   A.GALLO,C.LO STERZO,M.MORI,A.DI MATTEO,I.BERTINI,L.BANCI,    
JRNL        AUTH 2 M.BRUNORI,L.FEDERICI                                         
JRNL        TITL   STRUCTURE OF NUCLEOPHOSMIN DNA-BINDING DOMAIN AND ANALYSIS   
JRNL        TITL 2 OF ITS COMPLEX WITH A G-QUADRUPLEX SEQUENCE FROM THE C-MYC   
JRNL        TITL 3 PROMOTER.                                                    
JRNL        REF    J.BIOL.CHEM.                  V. 287 26539 2012              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   22707729                                                     
JRNL        DOI    10.1074/JBC.M112.371013                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : TOPSPIN 2.1, AMBER 11.0                              
REMARK   3   AUTHORS     : BRUKER BIOSPIN (TOPSPIN), CASE, DARDEN, CHEATHAM,    
REMARK   3                 III, SIMMERLING, WANG, DUKE, LUO, AND KOLLM (AMBER)  
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2LLH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-11.                  
REMARK 100 THE DEPOSITION ID IS D_1000102527.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.2                                
REMARK 210  IONIC STRENGTH                 : 20                                 
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.5 MM [U-15N] PROTEIN, 20 MM      
REMARK 210                                   SODIUM PHOSPHATE, 90% H2O/10%      
REMARK 210                                   D2O; 0.5 MM [U-13C; U-15N]         
REMARK 210                                   PROTEIN, 20 MM SODIUM PHOSPHATE,   
REMARK 210                                   90% H2O/10% D2O                    
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 3D CBCA(CO)NH;     
REMARK 210                                   3D HNCO; 3D HNCA; 3D HNCACB; 3D    
REMARK 210                                   HBHA(CO)NH; 3D HN(CO)CA; 3D        
REMARK 210                                   HN(CA)CO; 3D HCCH-TOCSY; 2D 1H-    
REMARK 210                                   1H NOESY; 3D 1H-13C NOESY; 3D 1H-  
REMARK 210                                   15N NOESY                          
REMARK 210  SPECTROMETER FIELD STRENGTH    : 900 MHZ; 700 MHZ; 500 MHZ          
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TOPSPIN 2.1, CARA 2.1, TALOS,      
REMARK 210                                   CYANA 2.1, PSVS                    
REMARK 210   METHOD USED                   : MOLECULAR DYNAMICS, SIMULATED      
REMARK 210                                   ANNEALING                          
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 400                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY A    -3                                                      
REMARK 465     SER A    -2                                                      
REMARK 465     HIS A    -1                                                      
REMARK 465     MET A     0                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  1 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.9 DEGREES          
REMARK 500  2 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500  3 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500  4 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500  4 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500  5 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   4.0 DEGREES          
REMARK 500  6 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.5 DEGREES          
REMARK 500  7 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500  7 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.2 DEGREES          
REMARK 500  9 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.9 DEGREES          
REMARK 500  9 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500 10 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500 12 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.4 DEGREES          
REMARK 500 12 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500 13 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.0 DEGREES          
REMARK 500 14 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.8 DEGREES          
REMARK 500 15 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.3 DEGREES          
REMARK 500 17 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   3.2 DEGREES          
REMARK 500 17 ARG A  67   NE  -  CZ  -  NH1 ANGL. DEV. =   3.1 DEGREES          
REMARK 500 19 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500 20 ARG A  53   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 PHE A   4      -39.07   -145.47                                   
REMARK 500  1 GLN A   7      -63.39   -146.44                                   
REMARK 500  1 LYS A   9     -164.69     46.96                                   
REMARK 500  1 LYS A  12      -45.88   -157.33                                   
REMARK 500  1 THR A  13       76.22     46.27                                   
REMARK 500  1 PRO A  17     -167.17    -65.36                                   
REMARK 500  1 GLU A  32      -60.35    -96.33                                   
REMARK 500  1 SER A  69       45.42    -83.15                                   
REMARK 500  2 GLN A   7      -68.21   -136.85                                   
REMARK 500  2 LYS A   9      -31.19   -142.30                                   
REMARK 500  2 VAL A  20      -25.24     58.87                                   
REMARK 500  3 PHE A   4     -171.07     55.80                                   
REMARK 500  3 LYS A   6       48.36   -163.58                                   
REMARK 500  3 LYS A  12       40.12   -142.04                                   
REMARK 500  3 PRO A  17     -176.90    -55.51                                   
REMARK 500  3 SER A  19     -164.37   -111.54                                   
REMARK 500  3 PHE A  52      -90.35   -135.06                                   
REMARK 500  3 ARG A  53      -53.62   -162.79                                   
REMARK 500  3 MET A  54      109.44     45.83                                   
REMARK 500  4 LYS A   9       80.65     50.71                                   
REMARK 500  4 PRO A  17      173.54    -52.48                                   
REMARK 500  4 LEU A  37      151.41     67.89                                   
REMARK 500  5 SER A  36       69.58   -108.71                                   
REMARK 500  5 ASP A  56       89.29    -67.78                                   
REMARK 500  6 SER A   3      128.80     61.44                                   
REMARK 500  6 LYS A   5     -161.29     61.67                                   
REMARK 500  6 LYS A   6      132.35     69.56                                   
REMARK 500  6 GLN A   7      -69.41     62.19                                   
REMARK 500  6 GLU A   8      -25.38     59.08                                   
REMARK 500  6 LYS A  12      176.01     56.67                                   
REMARK 500  6 SER A  18       17.54    -68.32                                   
REMARK 500  6 SER A  19      -81.85   -135.21                                   
REMARK 500  6 PHE A  52      136.89   -171.35                                   
REMARK 500  6 THR A  55      -21.53     52.67                                   
REMARK 500  7 SER A  36       -6.29   -161.46                                   
REMARK 500  7 THR A  55      -29.49     56.55                                   
REMARK 500  7 SER A  69       43.57    -85.99                                   
REMARK 500  8 LYS A   5      171.53     56.33                                   
REMARK 500  8 GLN A   7      -37.51   -135.76                                   
REMARK 500  8 GLU A   8      144.73     62.12                                   
REMARK 500  8 PRO A  17      160.93    -48.77                                   
REMARK 500  8 MET A  54       73.35     41.59                                   
REMARK 500  9 SER A   3      159.56     58.01                                   
REMARK 500  9 PHE A   4      -36.47   -135.54                                   
REMARK 500  9 GLN A   7      -61.82   -138.24                                   
REMARK 500  9 GLU A   8      -43.08     59.31                                   
REMARK 500  9 SER A  18       32.59    -80.57                                   
REMARK 500  9 PHE A  52      -27.59   -152.97                                   
REMARK 500  9 ARG A  53       93.86     53.30                                   
REMARK 500  9 THR A  55      -36.20     64.31                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     112 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2VXD   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 18048   RELATED DB: BMRB                                 
DBREF  2LLH A    1    70  UNP    P06748   NPM_HUMAN      225    294             
SEQADV 2LLH GLY A   -3  UNP  P06748              EXPRESSION TAG                 
SEQADV 2LLH SER A   -2  UNP  P06748              EXPRESSION TAG                 
SEQADV 2LLH HIS A   -1  UNP  P06748              EXPRESSION TAG                 
SEQADV 2LLH MET A    0  UNP  P06748              EXPRESSION TAG                 
SEQRES   1 A   74  GLY SER HIS MET GLN GLU SER PHE LYS LYS GLN GLU LYS          
SEQRES   2 A   74  THR PRO LYS THR PRO LYS GLY PRO SER SER VAL GLU ASP          
SEQRES   3 A   74  ILE LYS ALA LYS MET GLN ALA SER ILE GLU LYS GLY GLY          
SEQRES   4 A   74  SER LEU PRO LYS VAL GLU ALA LYS PHE ILE ASN TYR VAL          
SEQRES   5 A   74  LYS ASN CYS PHE ARG MET THR ASP GLN GLU ALA ILE GLN          
SEQRES   6 A   74  ASP LEU TRP GLN TRP ARG LYS SER LEU                          
HELIX    1   1 SER A   19  GLY A   34  1                                  16    
HELIX    2   2 VAL A   40  PHE A   52  1                                  13    
HELIX    3   3 ASP A   56  SER A   69  1                                  14    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1