data_2LM1 # _entry.id 2LM1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LM1 pdb_00002lm1 10.2210/pdb2lm1/pdb RCSB RCSB102547 ? ? BMRB 18095 ? ? WWPDB D_1000102547 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18095 BMRB unspecified . FR824D TargetDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LM1 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-11-18 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mills, J.L.' 1 'Lee, D.' 2 'Kohan, E.' 3 'Sahdev, S.' 4 'Acton, T.B.' 5 'Xiao, R.' 6 'Everett, J.K.' 7 'Kusch, T.' 8 'Montelione, G.T.' 9 'Szyperski, T.' 10 'Northeast Structural Genomics Consortium (NESG)' 11 'Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)' 12 # _citation.id primary _citation.title 'Northeast Structural Genomics Consortium Target FR824D' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mills, J.L.' 1 ? primary 'Lee, D.' 2 ? primary 'Kohan, E.' 3 ? primary 'Sahdev, S.' 4 ? primary 'Acton, T.B.' 5 ? primary 'Xiao, R.' 6 ? primary 'Everett, J.K.' 7 ? primary 'Montelione, G.T.' 8 ? primary 'Szyperski, T.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Lysine-specific demethylase lid' _entity.formula_weight 12493.500 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ARID domain residues 214-320' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Histone demethylase lid, Jumonji/ARID domain-containing protein lid, Protein little imaginal disks, Retinoblastoma-binding protein 2 homolog ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSS KSVGATLKAHYERILHPFEVYTSGKVL ; _entity_poly.pdbx_seq_one_letter_code_can ;PRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSS KSVGATLKAHYERILHPFEVYTSGKVL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier FR824D # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ARG n 1 3 VAL n 1 4 GLN n 1 5 ARG n 1 6 LEU n 1 7 ASN n 1 8 GLU n 1 9 LEU n 1 10 GLU n 1 11 ALA n 1 12 LYS n 1 13 THR n 1 14 ARG n 1 15 VAL n 1 16 LYS n 1 17 LEU n 1 18 ASN n 1 19 PHE n 1 20 LEU n 1 21 ASP n 1 22 GLN n 1 23 ILE n 1 24 ALA n 1 25 LYS n 1 26 PHE n 1 27 TRP n 1 28 GLU n 1 29 LEU n 1 30 GLN n 1 31 GLY n 1 32 SER n 1 33 SER n 1 34 LEU n 1 35 LYS n 1 36 ILE n 1 37 PRO n 1 38 MET n 1 39 VAL n 1 40 GLU n 1 41 ARG n 1 42 LYS n 1 43 ALA n 1 44 LEU n 1 45 ASP n 1 46 LEU n 1 47 TYR n 1 48 THR n 1 49 LEU n 1 50 HIS n 1 51 ARG n 1 52 ILE n 1 53 VAL n 1 54 GLN n 1 55 GLU n 1 56 GLU n 1 57 GLY n 1 58 GLY n 1 59 MET n 1 60 GLU n 1 61 GLN n 1 62 THR n 1 63 THR n 1 64 LYS n 1 65 ASP n 1 66 ARG n 1 67 LYS n 1 68 TRP n 1 69 ALA n 1 70 LYS n 1 71 VAL n 1 72 ALA n 1 73 ASN n 1 74 ARG n 1 75 MET n 1 76 GLN n 1 77 TYR n 1 78 PRO n 1 79 SER n 1 80 SER n 1 81 LYS n 1 82 SER n 1 83 VAL n 1 84 GLY n 1 85 ALA n 1 86 THR n 1 87 LEU n 1 88 LYS n 1 89 ALA n 1 90 HIS n 1 91 TYR n 1 92 GLU n 1 93 ARG n 1 94 ILE n 1 95 LEU n 1 96 HIS n 1 97 PRO n 1 98 PHE n 1 99 GLU n 1 100 VAL n 1 101 TYR n 1 102 THR n 1 103 SER n 1 104 GLY n 1 105 LYS n 1 106 VAL n 1 107 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CG9088, lid' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pMgK' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET15Nano6HT_NESG _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KDM5_DROME _struct_ref.pdbx_db_accession Q9VMJ7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSS KSVGATLKAHYERILHPFEVYTSGKVL ; _struct_ref.pdbx_align_begin 214 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LM1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9VMJ7 _struct_ref_seq.db_align_beg 214 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 320 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 214 _struct_ref_seq.pdbx_auth_seq_align_end 320 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCO' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HNCACB' 1 5 1 '3D HCCH-COSY' 1 6 1 '3D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY' 1 7 2 '2D 1H-13C HSQC' 1 8 1 '2D 1H-13C HSQC aliphatic' 1 9 1 '2D 1H-13C HSQC aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1.1 mM [U-100% 13C; U-100% 15N] FR824D, 100 mM sodium chloride, 5 mM DTT, 0.02 % sodium azide, 10 mM TRIS, 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '1.3 mM [U-5% 13C; U-100% 15N] FR824D, 100 mM sodium chloride, 5 mM DTT, 0.02 % sodium azide, 10 mM TRIS, 95% H2O/5% D2O' 2 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 750 Varian INOVA 1 'Varian INOVA' 600 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2LM1 _pdbx_nmr_refine.method 'torsion angle dynamics, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LM1 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LM1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Brunger, Adams, Clore, Gros, Nilges and Read' 'refinemen,structure solution,geometry optimization' CNS ? 1 'Guntert, Mumenthaler and Wuthrich' 'refinement,geometry optimization,structure solution' CYANA 3.0 2 'Huang, Tejero, Powers and Montelione' 'data analysis,refinement' AutoStructure 2.1 3 'Zimmerman, Moseley, Kulikowski and Montelione' 'data analysis,chemical shift assignment' AutoAssign 2.1 4 Guntert processing PROSA ? 5 'Keller and Wuthrich' 'data analysis,peak picking,chemical shift assignment' CARA ? 6 Varian collection VnmrJ ? 7 'Shen, Cornilescu, Delaglio and Bax' 'geometry optimization' TALOS+ ? 8 'Guntert, Mumenthaler and Wuthrich' refinement CYANA ? 9 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 10 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LM1 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LM1 _struct.title ;Solution NMR Structure of Lysine-specific demethylase lid from Drosophila melanogaster, Northeast Structural Genomics Consortium Target FR824D ; _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LM1 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text ;Structural Genomics, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), PSI-Biology, Protein Structure Initiative, Chaperone-Enabled Studies of Epigenetic Regulation Enzymes, CEBS, DNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 13 ? GLU A 28 ? THR A 226 GLU A 241 1 ? 16 HELX_P HELX_P2 2 ASP A 45 ? GLY A 57 ? ASP A 258 GLY A 270 1 ? 13 HELX_P HELX_P3 3 GLY A 58 ? ARG A 66 ? GLY A 271 ARG A 279 1 ? 9 HELX_P HELX_P4 4 LYS A 67 ? MET A 75 ? LYS A 280 MET A 288 1 ? 9 HELX_P HELX_P5 5 SER A 80 ? SER A 103 ? SER A 293 SER A 316 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2LM1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 214 214 PRO PRO A . n A 1 2 ARG 2 215 215 ARG ARG A . n A 1 3 VAL 3 216 216 VAL VAL A . n A 1 4 GLN 4 217 217 GLN GLN A . n A 1 5 ARG 5 218 218 ARG ARG A . n A 1 6 LEU 6 219 219 LEU LEU A . n A 1 7 ASN 7 220 220 ASN ASN A . n A 1 8 GLU 8 221 221 GLU GLU A . n A 1 9 LEU 9 222 222 LEU LEU A . n A 1 10 GLU 10 223 223 GLU GLU A . n A 1 11 ALA 11 224 224 ALA ALA A . n A 1 12 LYS 12 225 225 LYS LYS A . n A 1 13 THR 13 226 226 THR THR A . n A 1 14 ARG 14 227 227 ARG ARG A . n A 1 15 VAL 15 228 228 VAL VAL A . n A 1 16 LYS 16 229 229 LYS LYS A . n A 1 17 LEU 17 230 230 LEU LEU A . n A 1 18 ASN 18 231 231 ASN ASN A . n A 1 19 PHE 19 232 232 PHE PHE A . n A 1 20 LEU 20 233 233 LEU LEU A . n A 1 21 ASP 21 234 234 ASP ASP A . n A 1 22 GLN 22 235 235 GLN GLN A . n A 1 23 ILE 23 236 236 ILE ILE A . n A 1 24 ALA 24 237 237 ALA ALA A . n A 1 25 LYS 25 238 238 LYS LYS A . n A 1 26 PHE 26 239 239 PHE PHE A . n A 1 27 TRP 27 240 240 TRP TRP A . n A 1 28 GLU 28 241 241 GLU GLU A . n A 1 29 LEU 29 242 242 LEU LEU A . n A 1 30 GLN 30 243 243 GLN GLN A . n A 1 31 GLY 31 244 244 GLY GLY A . n A 1 32 SER 32 245 245 SER SER A . n A 1 33 SER 33 246 246 SER SER A . n A 1 34 LEU 34 247 247 LEU LEU A . n A 1 35 LYS 35 248 248 LYS LYS A . n A 1 36 ILE 36 249 249 ILE ILE A . n A 1 37 PRO 37 250 250 PRO PRO A . n A 1 38 MET 38 251 251 MET MET A . n A 1 39 VAL 39 252 252 VAL VAL A . n A 1 40 GLU 40 253 253 GLU GLU A . n A 1 41 ARG 41 254 254 ARG ARG A . n A 1 42 LYS 42 255 255 LYS LYS A . n A 1 43 ALA 43 256 256 ALA ALA A . n A 1 44 LEU 44 257 257 LEU LEU A . n A 1 45 ASP 45 258 258 ASP ASP A . n A 1 46 LEU 46 259 259 LEU LEU A . n A 1 47 TYR 47 260 260 TYR TYR A . n A 1 48 THR 48 261 261 THR THR A . n A 1 49 LEU 49 262 262 LEU LEU A . n A 1 50 HIS 50 263 263 HIS HIS A . n A 1 51 ARG 51 264 264 ARG ARG A . n A 1 52 ILE 52 265 265 ILE ILE A . n A 1 53 VAL 53 266 266 VAL VAL A . n A 1 54 GLN 54 267 267 GLN GLN A . n A 1 55 GLU 55 268 268 GLU GLU A . n A 1 56 GLU 56 269 269 GLU GLU A . n A 1 57 GLY 57 270 270 GLY GLY A . n A 1 58 GLY 58 271 271 GLY GLY A . n A 1 59 MET 59 272 272 MET MET A . n A 1 60 GLU 60 273 273 GLU GLU A . n A 1 61 GLN 61 274 274 GLN GLN A . n A 1 62 THR 62 275 275 THR THR A . n A 1 63 THR 63 276 276 THR THR A . n A 1 64 LYS 64 277 277 LYS LYS A . n A 1 65 ASP 65 278 278 ASP ASP A . n A 1 66 ARG 66 279 279 ARG ARG A . n A 1 67 LYS 67 280 280 LYS LYS A . n A 1 68 TRP 68 281 281 TRP TRP A . n A 1 69 ALA 69 282 282 ALA ALA A . n A 1 70 LYS 70 283 283 LYS LYS A . n A 1 71 VAL 71 284 284 VAL VAL A . n A 1 72 ALA 72 285 285 ALA ALA A . n A 1 73 ASN 73 286 286 ASN ASN A . n A 1 74 ARG 74 287 287 ARG ARG A . n A 1 75 MET 75 288 288 MET MET A . n A 1 76 GLN 76 289 289 GLN GLN A . n A 1 77 TYR 77 290 290 TYR TYR A . n A 1 78 PRO 78 291 291 PRO PRO A . n A 1 79 SER 79 292 292 SER SER A . n A 1 80 SER 80 293 293 SER SER A . n A 1 81 LYS 81 294 294 LYS LYS A . n A 1 82 SER 82 295 295 SER SER A . n A 1 83 VAL 83 296 296 VAL VAL A . n A 1 84 GLY 84 297 297 GLY GLY A . n A 1 85 ALA 85 298 298 ALA ALA A . n A 1 86 THR 86 299 299 THR THR A . n A 1 87 LEU 87 300 300 LEU LEU A . n A 1 88 LYS 88 301 301 LYS LYS A . n A 1 89 ALA 89 302 302 ALA ALA A . n A 1 90 HIS 90 303 303 HIS HIS A . n A 1 91 TYR 91 304 304 TYR TYR A . n A 1 92 GLU 92 305 305 GLU GLU A . n A 1 93 ARG 93 306 306 ARG ARG A . n A 1 94 ILE 94 307 307 ILE ILE A . n A 1 95 LEU 95 308 308 LEU LEU A . n A 1 96 HIS 96 309 309 HIS HIS A . n A 1 97 PRO 97 310 310 PRO PRO A . n A 1 98 PHE 98 311 311 PHE PHE A . n A 1 99 GLU 99 312 312 GLU GLU A . n A 1 100 VAL 100 313 313 VAL VAL A . n A 1 101 TYR 101 314 314 TYR TYR A . n A 1 102 THR 102 315 315 THR THR A . n A 1 103 SER 103 316 316 SER SER A . n A 1 104 GLY 104 317 317 GLY GLY A . n A 1 105 LYS 105 318 318 LYS LYS A . n A 1 106 VAL 106 319 319 VAL VAL A . n A 1 107 LEU 107 320 320 LEU LEU A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Northeast Structural Genomics Consortium' 1 NESG PSI:Biology 'Chaperone-Enabled Studies of Epigenetic Regulation Enzymes' 2 CEBS PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-21 2 'Structure model' 1 1 2012-08-29 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id FR824D-1 1.1 ? mM '[U-100% 13C; U-100% 15N]' 1 'sodium chloride-2' 100 ? mM ? 1 DTT-3 5 ? mM ? 1 'sodium azide-4' 0.02 ? % ? 1 TRIS-5 10 ? mM ? 1 FR824D-6 1.3 ? mM '[U-5% 13C; U-100% 15N]' 2 'sodium chloride-7' 100 ? mM ? 2 DTT-8 5 ? mM ? 2 'sodium azide-9' 0.02 ? % ? 2 TRIS-10 10 ? mM ? 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 221 ? ? -151.61 -71.12 2 1 LEU A 222 ? ? -102.33 -74.87 3 1 GLU A 223 ? ? 59.74 102.93 4 1 ALA A 224 ? ? -177.76 84.94 5 1 SER A 246 ? ? -68.59 94.40 6 1 ILE A 249 ? ? -110.98 79.66 7 1 LYS A 255 ? ? 81.78 -37.90 8 1 PRO A 291 ? ? -65.33 93.47 9 1 SER A 292 ? ? -65.22 91.35 10 1 LYS A 318 ? ? -108.81 71.80 11 2 ARG A 218 ? ? 67.78 102.41 12 2 ASN A 220 ? ? 62.37 85.44 13 2 GLU A 221 ? ? -81.53 -74.15 14 2 LEU A 222 ? ? -85.10 -93.41 15 2 GLU A 223 ? ? -144.03 -35.02 16 2 SER A 245 ? ? 60.00 -171.10 17 2 GLU A 253 ? ? -75.45 -71.38 18 2 ARG A 254 ? ? -163.66 -1.72 19 2 ASP A 258 ? ? -152.03 87.71 20 2 PRO A 291 ? ? -52.36 -70.39 21 2 SER A 316 ? ? 66.35 168.96 22 3 ASN A 220 ? ? 65.13 166.95 23 3 GLU A 221 ? ? -152.69 -63.77 24 3 LEU A 222 ? ? -94.91 -63.97 25 3 THR A 226 ? ? -82.25 32.30 26 3 SER A 246 ? ? -118.01 69.14 27 3 ILE A 249 ? ? -117.25 74.79 28 3 ALA A 256 ? ? 71.20 -175.70 29 3 ARG A 279 ? ? 60.23 67.80 30 3 SER A 316 ? ? -91.41 52.64 31 3 VAL A 319 ? ? -66.72 92.20 32 4 ARG A 215 ? ? -154.92 -56.95 33 4 LEU A 219 ? ? 69.01 -7.03 34 4 ASN A 220 ? ? -161.17 115.39 35 4 GLU A 221 ? ? -98.70 -66.90 36 4 LEU A 222 ? ? -127.93 -77.98 37 4 LYS A 225 ? ? -139.63 -58.26 38 4 ILE A 249 ? ? -116.06 78.45 39 4 PRO A 250 ? ? -90.19 -65.39 40 4 LYS A 255 ? ? 77.69 -44.08 41 4 LYS A 280 ? ? -91.95 44.66 42 4 SER A 292 ? ? 74.01 -81.19 43 4 LYS A 294 ? ? 66.22 -84.26 44 4 LYS A 318 ? ? -69.34 99.40 45 5 GLU A 221 ? ? -129.17 -57.51 46 5 LEU A 222 ? ? -135.84 -46.89 47 5 GLU A 223 ? ? -137.75 -92.36 48 5 ALA A 224 ? ? 179.75 89.82 49 5 LYS A 225 ? ? -173.72 -31.32 50 5 ARG A 227 ? ? -120.49 -67.15 51 5 TRP A 240 ? ? -115.27 -130.92 52 5 GLU A 241 ? ? 61.45 -70.64 53 5 GLN A 243 ? ? -81.35 34.92 54 5 PRO A 250 ? ? -89.76 -70.03 55 5 ARG A 279 ? ? 58.72 78.93 56 5 LYS A 294 ? ? -148.83 -72.24 57 6 LEU A 222 ? ? -141.68 -85.77 58 6 GLU A 223 ? ? -145.24 -42.50 59 6 ALA A 224 ? ? 79.52 -3.43 60 6 GLN A 243 ? ? -77.46 -74.81 61 6 SER A 245 ? ? 58.91 -162.58 62 6 ILE A 249 ? ? -119.32 78.11 63 6 GLU A 253 ? ? -76.07 -87.09 64 6 LYS A 294 ? ? -135.10 -91.33 65 7 ARG A 215 ? ? 62.38 105.46 66 7 ARG A 218 ? ? 63.97 -174.55 67 7 LEU A 219 ? ? -150.93 51.68 68 7 ASN A 220 ? ? 70.43 127.18 69 7 LEU A 222 ? ? -125.64 -66.20 70 7 LYS A 225 ? ? -155.27 60.64 71 7 LYS A 248 ? ? 75.75 59.75 72 7 MET A 251 ? ? 54.43 -172.72 73 7 VAL A 252 ? ? -170.41 -51.85 74 7 LYS A 255 ? ? 62.83 -74.33 75 7 LYS A 294 ? ? -133.93 -57.88 76 7 SER A 316 ? ? 64.76 160.99 77 8 ARG A 218 ? ? 62.95 171.30 78 8 GLU A 221 ? ? -120.12 -62.83 79 8 LEU A 222 ? ? -76.44 -76.70 80 8 GLU A 223 ? ? -163.05 117.83 81 8 ARG A 227 ? ? -94.08 -67.83 82 8 LYS A 248 ? ? 72.14 31.30 83 8 VAL A 252 ? ? -161.18 -44.57 84 8 LYS A 255 ? ? -45.65 166.29 85 8 ALA A 256 ? ? 75.11 126.31 86 8 SER A 292 ? ? -57.56 99.01 87 8 SER A 316 ? ? -80.59 -70.64 88 8 VAL A 319 ? ? 61.32 96.25 89 9 ARG A 218 ? ? 67.38 111.23 90 9 GLU A 221 ? ? 71.54 -66.67 91 9 LYS A 225 ? ? -152.85 5.97 92 9 ARG A 227 ? ? -89.32 -74.75 93 9 ILE A 249 ? ? -114.82 75.23 94 9 GLU A 253 ? ? -88.61 31.80 95 9 LYS A 255 ? ? -91.57 49.15 96 9 ALA A 256 ? ? 61.62 -153.14 97 9 SER A 293 ? ? -100.96 -69.68 98 10 ASN A 220 ? ? 62.69 171.05 99 10 GLU A 221 ? ? -173.27 -61.78 100 10 LEU A 222 ? ? -127.32 -66.04 101 10 LYS A 225 ? ? -77.96 20.73 102 10 ARG A 227 ? ? -66.93 -71.66 103 10 TRP A 240 ? ? -71.90 -85.76 104 10 GLU A 241 ? ? 67.96 -59.67 105 10 GLN A 243 ? ? -65.65 4.74 106 10 SER A 245 ? ? 68.18 -177.26 107 10 LYS A 248 ? ? 70.67 57.76 108 10 LYS A 255 ? ? 76.24 -32.17 109 10 LYS A 294 ? ? -154.96 -64.87 110 10 SER A 316 ? ? 67.07 148.36 111 11 ARG A 215 ? ? 62.54 -76.16 112 11 VAL A 216 ? ? -179.67 -46.34 113 11 THR A 226 ? ? 77.83 121.69 114 11 SER A 245 ? ? 67.92 179.38 115 11 LYS A 248 ? ? 71.01 63.78 116 11 LYS A 255 ? ? 75.83 -57.93 117 12 VAL A 216 ? ? 63.95 67.74 118 12 ARG A 218 ? ? 68.37 138.53 119 12 LEU A 219 ? ? 73.29 -44.21 120 12 ASN A 220 ? ? 70.13 117.03 121 12 LEU A 222 ? ? -87.91 -96.61 122 12 ALA A 224 ? ? -111.42 67.50 123 12 LYS A 225 ? ? -82.56 35.05 124 12 ARG A 227 ? ? -108.28 -65.09 125 12 SER A 245 ? ? 63.22 -177.63 126 12 LYS A 248 ? ? 78.11 59.84 127 12 PRO A 250 ? ? -90.85 -74.88 128 12 GLU A 253 ? ? -73.18 -84.02 129 12 ARG A 254 ? ? -151.62 5.29 130 12 ASP A 258 ? ? -117.03 78.86 131 12 SER A 292 ? ? -64.61 89.13 132 13 ARG A 218 ? ? -109.57 -65.93 133 13 LEU A 219 ? ? -158.57 -62.09 134 13 ASN A 220 ? ? 70.30 122.93 135 13 GLU A 221 ? ? -167.00 -37.18 136 13 ALA A 224 ? ? -167.32 37.39 137 13 THR A 226 ? ? -86.55 39.97 138 13 LYS A 255 ? ? 75.30 -19.91 139 13 LYS A 280 ? ? -100.83 41.85 140 13 PRO A 291 ? ? -62.97 -176.56 141 13 SER A 293 ? ? 73.83 128.59 142 14 ARG A 215 ? ? -113.70 -82.74 143 14 LEU A 222 ? ? -76.17 -94.72 144 14 GLU A 223 ? ? 179.14 147.19 145 14 ALA A 224 ? ? 57.18 80.23 146 14 THR A 226 ? ? 63.45 126.68 147 14 LYS A 248 ? ? 76.42 38.79 148 14 VAL A 252 ? ? -145.36 -48.50 149 14 ARG A 254 ? ? -113.46 -92.86 150 14 LYS A 255 ? ? 163.90 -42.42 151 14 SER A 316 ? ? 64.81 -178.80 152 15 LEU A 219 ? ? -113.64 -73.83 153 15 ASN A 220 ? ? 49.27 71.57 154 15 ALA A 224 ? ? -143.03 -37.16 155 15 LYS A 225 ? ? -150.21 -56.54 156 15 ARG A 227 ? ? -102.53 -67.29 157 15 LEU A 247 ? ? 69.04 167.26 158 15 LYS A 248 ? ? 73.93 45.71 159 15 PRO A 250 ? ? -87.37 -70.35 160 15 LYS A 255 ? ? 66.82 178.63 161 15 ALA A 256 ? ? 66.14 99.04 162 15 GLN A 289 ? ? 67.99 67.28 163 15 SER A 292 ? ? -108.25 -161.96 164 16 LEU A 219 ? ? -151.75 -36.16 165 16 ASN A 220 ? ? 62.86 97.92 166 16 LEU A 222 ? ? -87.39 -95.55 167 16 GLU A 223 ? ? 54.28 105.10 168 16 LYS A 225 ? ? -58.69 -8.94 169 16 THR A 226 ? ? -39.43 129.33 170 16 TRP A 240 ? ? -77.87 -77.75 171 16 GLU A 241 ? ? 64.45 -68.48 172 16 LEU A 242 ? ? -158.57 37.22 173 16 SER A 245 ? ? 72.39 160.06 174 16 LYS A 248 ? ? 77.16 41.19 175 16 LYS A 255 ? ? 78.17 -34.22 176 16 ASP A 258 ? ? -113.83 73.39 177 16 LYS A 280 ? ? -93.37 33.85 178 16 LYS A 294 ? ? -88.05 -83.20 179 17 LEU A 219 ? ? -158.74 -54.39 180 17 ASN A 220 ? ? 72.75 133.28 181 17 GLU A 221 ? ? -72.77 -72.33 182 17 LEU A 222 ? ? -123.66 -63.59 183 17 ILE A 249 ? ? -115.68 79.46 184 17 LYS A 255 ? ? 72.53 -47.71 185 17 SER A 292 ? ? -63.82 95.77 186 18 LEU A 219 ? ? 67.34 -65.27 187 18 GLU A 221 ? ? -152.84 -63.63 188 18 LYS A 225 ? ? -101.76 -78.56 189 18 THR A 226 ? ? 54.77 -171.44 190 18 ARG A 227 ? ? -116.00 -81.67 191 18 SER A 245 ? ? 53.98 18.12 192 18 LEU A 247 ? ? -129.44 -164.48 193 18 ALA A 256 ? ? 62.33 110.17 194 18 LEU A 257 ? ? -69.35 98.01 195 18 PRO A 291 ? ? -55.40 93.17 196 18 SER A 292 ? ? -55.00 103.00 197 19 GLN A 217 ? ? 63.47 79.70 198 19 ARG A 218 ? ? 68.85 159.10 199 19 ASN A 220 ? ? 64.88 110.41 200 19 GLU A 221 ? ? -90.94 -73.64 201 19 LEU A 222 ? ? -133.56 -73.27 202 19 SER A 245 ? ? -57.79 84.19 203 19 ILE A 249 ? ? -119.89 70.44 204 19 LYS A 255 ? ? 72.66 -33.40 205 19 ARG A 279 ? ? 72.48 37.65 206 19 SER A 292 ? ? -67.96 86.64 207 20 ARG A 218 ? ? 65.33 166.02 208 20 ASN A 220 ? ? 65.99 122.77 209 20 GLU A 221 ? ? -77.05 -71.62 210 20 LEU A 222 ? ? -104.67 -84.69 211 20 GLU A 223 ? ? -133.44 -48.58 212 20 LYS A 248 ? ? 73.54 49.18 213 20 PRO A 250 ? ? -95.57 -78.67 214 20 LYS A 255 ? ? 71.87 -66.04 215 20 GLN A 289 ? ? 75.03 49.12 216 20 LYS A 294 ? ? -80.90 -133.20 217 20 LYS A 318 ? ? 64.01 144.91 #