data_2LP0 # _entry.id 2LP0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LP0 pdb_00002lp0 10.2210/pdb2lp0/pdb RCSB RCSB102653 ? ? BMRB 17407 ? ? WWPDB D_1000102653 ? ? # _pdbx_database_related.db_id 17407 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LP0 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2012-01-29 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, C.' 1 'Zhou, B.' 2 'Xu, Z.' 3 'Zhu, G.' 4 # _citation.id primary _citation.title 'Structural basis for homeodomain recognition by the cell-cycle regulator Geminin' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22615398 _citation.pdbx_database_id_DOI 10.1073/pnas.1200874109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhou, B.' 1 ? primary 'Liu, C.' 2 ? primary 'Xu, Z.' 3 ? primary 'Zhu, G.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeobox protein Hox-C9' 7739.212 1 ? ? 'UNP residues 192-251' ? 2 polymer man Geminin 2330.237 1 ? ? 'UNP residues 171-190' ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Homeobox protein Hox-3B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMN TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMN A ? 2 'polypeptide(L)' no no NQEFDSEEETVEDSLVEDSE NQEFDSEEETVEDSLVEDSE B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ARG n 1 3 LYS n 1 4 LYS n 1 5 ARG n 1 6 CYS n 1 7 PRO n 1 8 TYR n 1 9 THR n 1 10 LYS n 1 11 TYR n 1 12 GLN n 1 13 THR n 1 14 LEU n 1 15 GLU n 1 16 LEU n 1 17 GLU n 1 18 LYS n 1 19 GLU n 1 20 PHE n 1 21 LEU n 1 22 PHE n 1 23 ASN n 1 24 MET n 1 25 TYR n 1 26 LEU n 1 27 THR n 1 28 ARG n 1 29 ASP n 1 30 ARG n 1 31 ARG n 1 32 TYR n 1 33 GLU n 1 34 VAL n 1 35 ALA n 1 36 ARG n 1 37 VAL n 1 38 LEU n 1 39 ASN n 1 40 LEU n 1 41 THR n 1 42 GLU n 1 43 ARG n 1 44 GLN n 1 45 VAL n 1 46 LYS n 1 47 ILE n 1 48 TRP n 1 49 PHE n 1 50 GLN n 1 51 ASN n 1 52 ARG n 1 53 ARG n 1 54 MET n 1 55 LYS n 1 56 MET n 1 57 LYS n 1 58 LYS n 1 59 MET n 1 60 ASN n 2 1 ASN n 2 2 GLN n 2 3 GLU n 2 4 PHE n 2 5 ASP n 2 6 SER n 2 7 GLU n 2 8 GLU n 2 9 GLU n 2 10 THR n 2 11 VAL n 2 12 GLU n 2 13 ASP n 2 14 SER n 2 15 LEU n 2 16 VAL n 2 17 GLU n 2 18 ASP n 2 19 SER n 2 20 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? HOXC9 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? vector pet32 ? ? ? ? ? 2 1 sample ? ? ? human ? GMNN ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? vector pet32 ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP HXC9_HUMAN P31274 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMN 192 ? 2 UNP GEMI_HUMAN O75496 2 NQEFDSEEETVEDSLVEDSE 171 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2LP0 A 1 ? 60 ? P31274 192 ? 251 ? 17 76 2 2 2LP0 B 1 ? 20 ? O75496 171 ? 190 ? 171 190 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 2 '2D 1H-15N HSQC' 1 3 1 '2D 1H-13C HSQC' 1 4 2 '2D 1H-13C HSQC' 1 5 1 '3D HNCO' 1 6 1 '3D HNCACB' 1 7 1 '3D CBCA(CO)NH' 1 8 3 '3D HCCH-TOCSY' 1 9 1 '3D 1H-15N NOESY' 1 10 3 '3D 1H-13C NOESY aliphatic' 1 11 2 '3D HNCO' 1 12 2 '3D CBCA(CO)NH' 1 13 2 '3D HNCACB' 1 14 2 '3D 1H-15N NOESY' 1 15 4 '3D 1H-13C NOESY aliphatic' 1 16 4 '3D HCCH-TOCSY' 1 17 3 '3D 13C-FILTERED 13C-EDITED NOESY' 1 18 4 '3D 13C-FILTERED 13C-EDITED NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.125 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-5, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-10, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' ;0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-11, 1.0 mM Geminin-12, 25 mM potassium phosphate-13, 100 mM sodium chloride-14, 5 mM DTT-15, 100% D2O ; 3 '100% D2O' ;1.0 mM Hox-C9-16, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-17, 25 mM potassium phosphate-18, 100 mM sodium chloride-19, 5 mM DTT-20, 100% D2O ; 4 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian INOVA 1 'Varian INOVA' 750 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2LP0 _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LP0 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LP0 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version Varian collection VnmrJ 1 ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2 ? Goddard 'peak picking' Sparky 3 ? Goddard 'chemical shift assignment' Sparky 4 ? Goddard 'data analysis' Sparky 5 ? 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 6 ? 'Guntert, Mumenthaler and Wuthrich' 'data analysis' CYANA 7 ? 'Laskowski and MacArthur' 'data analysis' ProcheckNMR 8 ? 'Laskowski and MacArthur' 'geometry optimization' ProcheckNMR 9 ? 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 10 ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 'geometry optimization' CNS 11 ? 'Alexandre Bonvin' refinement HADDOCK 12 ? ? refinement CYANA 13 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LP0 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LP0 _struct.title 'The solution structure of homeodomain-protein complex' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LP0 _struct_keywords.pdbx_keywords 'TRANSCRIPTION/CELL CYCLE' _struct_keywords.text 'homeodomain, TRANSCRIPTION-CELL CYCLE complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 9 ? ASN A 23 ? THR A 25 ASN A 39 1 ? 15 HELX_P HELX_P2 2 THR A 27 ? LEU A 38 ? THR A 43 LEU A 54 1 ? 12 HELX_P HELX_P3 3 THR A 41 ? LYS A 58 ? THR A 57 LYS A 74 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2LP0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 17 17 THR THR A . n A 1 2 ARG 2 18 18 ARG ARG A . n A 1 3 LYS 3 19 19 LYS LYS A . n A 1 4 LYS 4 20 20 LYS LYS A . n A 1 5 ARG 5 21 21 ARG ARG A . n A 1 6 CYS 6 22 22 CYS CYS A . n A 1 7 PRO 7 23 23 PRO PRO A . n A 1 8 TYR 8 24 24 TYR TYR A . n A 1 9 THR 9 25 25 THR THR A . n A 1 10 LYS 10 26 26 LYS LYS A . n A 1 11 TYR 11 27 27 TYR TYR A . n A 1 12 GLN 12 28 28 GLN GLN A . n A 1 13 THR 13 29 29 THR THR A . n A 1 14 LEU 14 30 30 LEU LEU A . n A 1 15 GLU 15 31 31 GLU GLU A . n A 1 16 LEU 16 32 32 LEU LEU A . n A 1 17 GLU 17 33 33 GLU GLU A . n A 1 18 LYS 18 34 34 LYS LYS A . n A 1 19 GLU 19 35 35 GLU GLU A . n A 1 20 PHE 20 36 36 PHE PHE A . n A 1 21 LEU 21 37 37 LEU LEU A . n A 1 22 PHE 22 38 38 PHE PHE A . n A 1 23 ASN 23 39 39 ASN ASN A . n A 1 24 MET 24 40 40 MET MET A . n A 1 25 TYR 25 41 41 TYR TYR A . n A 1 26 LEU 26 42 42 LEU LEU A . n A 1 27 THR 27 43 43 THR THR A . n A 1 28 ARG 28 44 44 ARG ARG A . n A 1 29 ASP 29 45 45 ASP ASP A . n A 1 30 ARG 30 46 46 ARG ARG A . n A 1 31 ARG 31 47 47 ARG ARG A . n A 1 32 TYR 32 48 48 TYR TYR A . n A 1 33 GLU 33 49 49 GLU GLU A . n A 1 34 VAL 34 50 50 VAL VAL A . n A 1 35 ALA 35 51 51 ALA ALA A . n A 1 36 ARG 36 52 52 ARG ARG A . n A 1 37 VAL 37 53 53 VAL VAL A . n A 1 38 LEU 38 54 54 LEU LEU A . n A 1 39 ASN 39 55 55 ASN ASN A . n A 1 40 LEU 40 56 56 LEU LEU A . n A 1 41 THR 41 57 57 THR THR A . n A 1 42 GLU 42 58 58 GLU GLU A . n A 1 43 ARG 43 59 59 ARG ARG A . n A 1 44 GLN 44 60 60 GLN GLN A . n A 1 45 VAL 45 61 61 VAL VAL A . n A 1 46 LYS 46 62 62 LYS LYS A . n A 1 47 ILE 47 63 63 ILE ILE A . n A 1 48 TRP 48 64 64 TRP TRP A . n A 1 49 PHE 49 65 65 PHE PHE A . n A 1 50 GLN 50 66 66 GLN GLN A . n A 1 51 ASN 51 67 67 ASN ASN A . n A 1 52 ARG 52 68 68 ARG ARG A . n A 1 53 ARG 53 69 69 ARG ARG A . n A 1 54 MET 54 70 70 MET MET A . n A 1 55 LYS 55 71 71 LYS LYS A . n A 1 56 MET 56 72 72 MET MET A . n A 1 57 LYS 57 73 73 LYS LYS A . n A 1 58 LYS 58 74 74 LYS LYS A . n A 1 59 MET 59 75 75 MET MET A . n A 1 60 ASN 60 76 76 ASN ASN A . n B 2 1 ASN 1 171 171 ASN ASN B . n B 2 2 GLN 2 172 172 GLN GLN B . n B 2 3 GLU 3 173 173 GLU GLU B . n B 2 4 PHE 4 174 174 PHE PHE B . n B 2 5 ASP 5 175 175 ASP ASP B . n B 2 6 SER 6 176 176 SER SER B . n B 2 7 GLU 7 177 177 GLU GLU B . n B 2 8 GLU 8 178 178 GLU GLU B . n B 2 9 GLU 9 179 179 GLU GLU B . n B 2 10 THR 10 180 180 THR THR B . n B 2 11 VAL 11 181 181 VAL VAL B . n B 2 12 GLU 12 182 182 GLU GLU B . n B 2 13 ASP 13 183 183 ASP ASP B . n B 2 14 SER 14 184 184 SER SER B . n B 2 15 LEU 15 185 185 LEU LEU B . n B 2 16 VAL 16 186 186 VAL VAL B . n B 2 17 GLU 17 187 187 GLU GLU B . n B 2 18 ASP 18 188 188 ASP ASP B . n B 2 19 SER 19 189 189 SER SER B . n B 2 20 GLU 20 190 190 GLU GLU B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-06 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Hox-C9-1 0.8 ? mM '[U-100% 13C; U-100% 15N]' 1 Geminin-2 1.0 ? mM ? 1 'potassium phosphate-3' 25 ? mM ? 1 'sodium chloride-4' 100 ? mM ? 1 DTT-5 5 ? mM ? 1 Hox-C9-6 1.0 ? mM ? 2 Geminin-7 0.8 ? mM '[U-100% 13C; U-100% 15N]' 2 'potassium phosphate-8' 25 ? mM ? 2 'sodium chloride-9' 100 ? mM ? 2 DTT-10 5 ? mM ? 2 Hox-C9-11 0.8 ? mM '[U-100% 13C; U-100% 15N]' 3 Geminin-12 1.0 ? mM ? 3 'potassium phosphate-13' 25 ? mM ? 3 'sodium chloride-14' 100 ? mM ? 3 DTT-15 5 ? mM ? 3 Hox-C9-16 1.0 ? mM ? 4 Geminin-17 0.8 ? mM '[U-100% 13C; U-100% 15N]' 4 'potassium phosphate-18' 25 ? mM ? 4 'sodium chloride-19' 100 ? mM ? 4 DTT-20 5 ? mM ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ1 A LYS 20 ? ? OE1 B GLU 179 ? ? 1.59 2 2 HZ3 A LYS 74 ? ? OE1 B GLU 187 ? ? 1.56 3 2 HZ1 A LYS 19 ? ? OE2 B GLU 182 ? ? 1.57 4 2 HZ3 A LYS 71 ? ? O B GLU 190 ? ? 1.60 5 4 H A ARG 18 ? ? OE1 B GLU 182 ? ? 1.58 6 4 OE1 A GLU 35 ? ? HH12 A ARG 47 ? ? 1.58 7 5 OD1 A ASN 67 ? ? HZ2 A LYS 71 ? ? 1.57 8 6 HB3 A LEU 56 ? ? HG3 A GLN 60 ? ? 1.33 9 6 HZ3 A LYS 71 ? ? OE1 B GLU 187 ? ? 1.55 10 6 OE2 B GLU 182 ? ? HG B SER 184 ? ? 1.59 11 8 HG1 A THR 57 ? ? OE1 A GLN 60 ? ? 1.58 12 8 HZ1 A LYS 19 ? ? OE2 B GLU 182 ? ? 1.60 13 9 HG3 A MET 75 ? ? HG12 B VAL 186 ? ? 1.32 14 10 HB2 A LYS 74 ? ? HB B VAL 186 ? ? 1.27 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 20 ? ? 69.47 -86.76 2 1 PHE B 174 ? ? -81.20 -80.68 3 1 ASP B 175 ? ? 36.79 -107.37 4 1 SER B 176 ? ? 165.78 149.09 5 1 SER B 184 ? ? -144.17 12.19 6 2 ARG A 18 ? ? 70.81 129.03 7 2 LYS A 19 ? ? -68.75 92.08 8 2 LEU A 54 ? ? -97.90 -93.53 9 2 ASN A 55 ? ? -176.32 43.77 10 2 MET A 75 ? ? -161.23 92.00 11 2 PHE B 174 ? ? -145.27 -63.13 12 3 LYS A 19 ? ? 72.83 -45.70 13 3 LYS A 20 ? ? -77.12 -149.73 14 3 LEU A 54 ? ? -94.13 -91.33 15 3 ASN A 55 ? ? -179.44 33.30 16 3 LYS A 74 ? ? -87.82 -73.21 17 3 MET A 75 ? ? -80.87 46.45 18 3 PHE B 174 ? ? -108.35 -60.96 19 3 ASP B 175 ? ? -156.23 9.21 20 3 SER B 176 ? ? -142.29 28.13 21 3 GLU B 178 ? ? -157.09 24.21 22 3 VAL B 181 ? ? -113.08 73.24 23 3 SER B 184 ? ? -81.59 49.80 24 3 VAL B 186 ? ? -94.02 50.14 25 3 SER B 189 ? ? -174.28 -26.23 26 4 LYS A 20 ? ? 67.62 171.25 27 4 LEU A 54 ? ? -91.37 -92.04 28 4 ASN A 55 ? ? 177.65 29.80 29 4 LYS A 74 ? ? -70.40 -70.90 30 4 VAL B 181 ? ? -100.10 67.46 31 4 LEU B 185 ? ? -166.08 -33.60 32 4 VAL B 186 ? ? -100.57 69.23 33 4 ASP B 188 ? ? 62.99 64.32 34 4 SER B 189 ? ? -142.48 -4.54 35 5 LYS A 19 ? ? 73.16 -68.07 36 5 LYS A 20 ? ? 57.16 -155.15 37 5 GLU B 177 ? ? -91.24 -72.44 38 5 ASP B 183 ? ? 65.52 134.59 39 5 LEU B 185 ? ? -101.50 -86.26 40 5 SER B 189 ? ? -146.60 -37.36 41 6 LYS A 19 ? ? -131.91 -73.40 42 6 PRO A 23 ? ? -69.47 99.81 43 6 MET A 75 ? ? -83.39 38.59 44 6 GLN B 172 ? ? 63.60 95.04 45 6 GLU B 173 ? ? 65.97 -91.27 46 6 PHE B 174 ? ? -154.17 -71.62 47 6 SER B 176 ? ? -67.55 85.30 48 6 GLU B 177 ? ? -148.16 31.90 49 6 THR B 180 ? ? -129.75 -50.21 50 6 SER B 184 ? ? -110.38 -154.60 51 6 LEU B 185 ? ? -107.17 -69.58 52 7 ARG A 18 ? ? -161.17 84.15 53 7 LYS A 19 ? ? -138.35 -42.17 54 7 LEU A 54 ? ? -96.43 -80.39 55 7 ASN A 55 ? ? 169.75 26.37 56 7 MET A 75 ? ? -171.18 94.78 57 7 GLN B 172 ? ? -144.47 28.06 58 7 ASP B 175 ? ? 74.35 134.64 59 7 GLU B 179 ? ? -64.33 -177.84 60 7 LEU B 185 ? ? -87.91 -83.98 61 8 LYS A 74 ? ? -78.28 -74.31 62 8 GLN B 172 ? ? 64.46 -165.13 63 8 VAL B 186 ? ? -100.04 68.06 64 8 GLU B 187 ? ? -106.83 77.69 65 9 LYS A 19 ? ? -169.01 -67.22 66 9 LEU A 54 ? ? -94.42 -91.50 67 9 ASN A 55 ? ? -177.09 34.85 68 9 ASP B 175 ? ? -161.50 -168.24 69 9 GLU B 177 ? ? -160.44 44.42 70 9 THR B 180 ? ? -165.29 -68.96 71 9 GLU B 182 ? ? -33.51 108.89 72 9 ASP B 183 ? ? -99.64 -144.39 73 9 VAL B 186 ? ? -104.83 74.98 74 10 LYS A 20 ? ? 68.93 166.80 75 10 PRO A 23 ? ? -64.88 89.04 76 10 LEU A 54 ? ? -91.71 -84.53 77 10 ASN A 55 ? ? 178.99 18.89 78 10 MET A 75 ? ? -155.29 75.93 79 10 ASP B 175 ? ? -148.15 27.74 80 10 GLU B 177 ? ? -159.87 28.21 81 10 GLU B 178 ? ? -149.63 27.99 82 10 GLU B 182 ? ? -38.74 117.01 83 10 SER B 184 ? ? 71.04 135.79 84 10 LEU B 185 ? ? -165.13 -65.36 #