HEADER SIGNALING PROTEIN 11-FEB-12 2LPE TITLE SOLUTION NMR STRUCTURE OF THE KSR1 CA1-CA1A DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINASE SUPPRESSOR OF RAS 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-170; COMPND 5 SYNONYM: MKSR1, PROTEIN HB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KSR, KSR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PJEXPRESS411; SOURCE 10 OTHER_DETAILS: DNA2.0 KEYWDS SAM DOMAIN, CC-SAM, COILED-COIL, SIGNALING PROTEIN, SCAFFOLDING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR D.KOVEAL,W.PETI,R.PAGE REVDAT 3 15-MAY-24 2LPE 1 REMARK REVDAT 2 14-JUN-23 2LPE 1 REMARK SEQADV REVDAT 1 26-DEC-12 2LPE 0 JRNL AUTH D.KOVEAL,N.SCHUH-NUHFER,D.RITT,R.PAGE,D.K.MORRISON,W.PETI JRNL TITL A CC-SAM, FOR COILED COIL STERILE A MOTIF, DOMAIN TARGETS JRNL TITL 2 THE SCAFFOLD KSR-1 TO SPECIFIC SITES IN THE PLASMA MEMBRANE JRNL REF SCI.SIGNAL. V. 5 RA94 2012 JRNL REFN ESSN 1937-9145 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LPE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000102667. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2 MM [U-99% 15N] KSR1 CA1-CA1A REMARK 210 DOMAIN, 20 MM SODIUM PHOSPHATE, REMARK 210 100 MM SODIUM CHLORIDE, 0.5 MM REMARK 210 TCEP, 90% H2O/10% D2O; 2 MM [U- REMARK 210 99% 13C; U-99% 15N] KSR1 CA1- REMARK 210 CA1A DOMAIN, 20 MM SODIUM REMARK 210 PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 0.5 MM TCEP, 90% H2O/ REMARK 210 10% D2O; 2 MM KSR1 CA1-CA1A REMARK 210 DOMAIN, 20 MM SODIUM PHOSPHATE, REMARK 210 100 MM SODIUM CHLORIDE, 0.5 MM REMARK 210 TCEP, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-EDITED_NOESY; 3D_13C REMARK 210 -EDITED_NOESY; 2D 1H-1H NOESY; REMARK 210 3D HNCA; 3D HNCACB; 3D HBHA(CO) REMARK 210 NH; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 3D REMARK 210 CBCA(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, TOPSPIN 1.3, CARA REMARK 210 METHOD USED : CNS WATER REFINEMENT USING REMARK 210 RECOORD SCRIPTS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 138 HH12 ARG A 166 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 0 -10.33 86.44 REMARK 500 1 ASP A 96 -73.81 -114.54 REMARK 500 1 ARG A 97 -88.91 26.05 REMARK 500 1 THR A 98 166.95 177.94 REMARK 500 1 ASN A 115 88.51 65.78 REMARK 500 1 ARG A 117 84.09 53.93 REMARK 500 1 THR A 152 -71.44 40.59 REMARK 500 1 THR A 169 165.18 67.89 REMARK 500 2 MET A 0 -93.49 52.96 REMARK 500 2 LYS A 44 -43.21 -132.97 REMARK 500 2 LYS A 59 -32.62 -137.02 REMARK 500 2 CYS A 60 79.09 61.68 REMARK 500 2 ARG A 97 -146.72 -86.73 REMARK 500 2 ASN A 115 81.05 78.13 REMARK 500 2 VAL A 116 75.12 -116.35 REMARK 500 2 ARG A 117 69.72 35.70 REMARK 500 3 HIS A -1 -80.64 -111.83 REMARK 500 3 MET A 0 86.99 -164.33 REMARK 500 3 THR A 58 -62.16 -95.44 REMARK 500 3 LYS A 59 -0.10 -146.41 REMARK 500 3 ARG A 97 -99.29 -42.68 REMARK 500 3 TRP A 110 -53.15 -122.41 REMARK 500 3 ASN A 115 84.57 70.67 REMARK 500 3 ARG A 117 68.53 37.80 REMARK 500 4 HIS A -1 -46.90 -160.05 REMARK 500 4 GLN A 43 17.95 58.35 REMARK 500 4 SER A 61 97.20 72.11 REMARK 500 4 ASN A 115 64.69 63.32 REMARK 500 4 ARG A 117 76.62 31.01 REMARK 500 5 ASP A 25 46.59 -83.19 REMARK 500 5 LEU A 42 -70.78 -83.91 REMARK 500 5 GLN A 43 16.30 59.85 REMARK 500 5 THR A 58 -88.18 -92.77 REMARK 500 5 ARG A 97 -162.33 -100.47 REMARK 500 5 ASN A 115 73.42 66.91 REMARK 500 5 VAL A 168 48.01 -90.48 REMARK 500 6 LEU A 36 -35.45 -133.48 REMARK 500 6 GLN A 41 -58.56 -143.93 REMARK 500 6 GLN A 43 -3.32 63.48 REMARK 500 6 LYS A 59 -156.92 -141.58 REMARK 500 6 CYS A 60 93.78 71.96 REMARK 500 6 ARG A 97 -144.12 -88.49 REMARK 500 6 ASN A 115 67.34 63.61 REMARK 500 6 ARG A 117 74.34 31.40 REMARK 500 7 ASP A 25 77.91 51.07 REMARK 500 7 GLN A 41 -55.20 -122.19 REMARK 500 7 ASN A 64 -52.93 -132.39 REMARK 500 7 ASP A 65 -62.74 68.13 REMARK 500 7 GLN A 87 -63.85 -100.66 REMARK 500 7 ARG A 97 -83.77 -45.95 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 5 ARG A 147 0.11 SIDE CHAIN REMARK 500 7 ARG A 106 0.12 SIDE CHAIN REMARK 500 8 ARG A 106 0.07 SIDE CHAIN REMARK 500 9 ARG A 166 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17045 RELATED DB: BMRB REMARK 900 BACKBONE AND SIDE CHAIN (1)H, (15)N AND (13)C ASSIGNMENTS OF THE REMARK 900 KSR1 CA1-CA1A DOMAIN DBREF 2LPE A 25 170 UNP Q61097 KSR1_MOUSE 25 170 SEQADV 2LPE GLY A -2 UNP Q61097 EXPRESSION TAG SEQADV 2LPE HIS A -1 UNP Q61097 EXPRESSION TAG SEQADV 2LPE MET A 0 UNP Q61097 EXPRESSION TAG SEQRES 1 A 149 GLY HIS MET ASP GLY GLY ALA GLY ALA ALA VAL SER ARG SEQRES 2 A 149 ALA LEU GLN GLN CYS GLY GLN LEU GLN LYS LEU ILE ASP SEQRES 3 A 149 ILE SER ILE GLY SER LEU ARG GLY LEU ARG THR LYS CYS SEQRES 4 A 149 SER VAL SER ASN ASP LEU THR GLN GLN GLU ILE ARG THR SEQRES 5 A 149 LEU GLU ALA LYS LEU VAL LYS TYR ILE CYS LYS GLN GLN SEQRES 6 A 149 GLN SER LYS LEU SER VAL THR PRO SER ASP ARG THR ALA SEQRES 7 A 149 GLU LEU ASN SER TYR PRO ARG PHE SER ASP TRP LEU TYR SEQRES 8 A 149 ILE PHE ASN VAL ARG PRO GLU VAL VAL GLN GLU ILE PRO SEQRES 9 A 149 GLN GLU LEU THR LEU ASP ALA LEU LEU GLU MET ASP GLU SEQRES 10 A 149 ALA LYS ALA LYS GLU MET LEU ARG ARG TRP GLY ALA SER SEQRES 11 A 149 THR GLU GLU CYS SER ARG LEU GLN GLN ALA LEU THR CYS SEQRES 12 A 149 LEU ARG LYS VAL THR GLY HELIX 1 1 VAL A 32 GLN A 37 1 6 HELIX 2 2 GLN A 38 GLY A 40 5 3 HELIX 3 3 ILE A 46 LYS A 59 1 14 HELIX 4 4 ASN A 64 CYS A 83 1 20 HELIX 5 5 LYS A 84 GLN A 86 5 3 HELIX 6 6 GLN A 87 SER A 91 5 5 HELIX 7 7 GLU A 100 TYR A 104 5 5 HELIX 8 8 TRP A 110 ASN A 115 1 6 HELIX 9 9 ARG A 117 GLN A 122 1 6 HELIX 10 10 THR A 129 LEU A 134 1 6 HELIX 11 11 ASP A 137 ARG A 147 1 11 HELIX 12 12 THR A 152 THR A 163 1 12 HELIX 13 13 CYS A 164 VAL A 168 5 5 CISPEP 1 TYR A 104 PRO A 105 1 -5.75 CISPEP 2 TYR A 104 PRO A 105 2 -3.09 CISPEP 3 TYR A 104 PRO A 105 3 -1.35 CISPEP 4 TYR A 104 PRO A 105 4 0.11 CISPEP 5 TYR A 104 PRO A 105 5 -0.12 CISPEP 6 TYR A 104 PRO A 105 6 -2.40 CISPEP 7 TYR A 104 PRO A 105 7 0.11 CISPEP 8 TYR A 104 PRO A 105 8 -1.61 CISPEP 9 TYR A 104 PRO A 105 9 -2.85 CISPEP 10 TYR A 104 PRO A 105 10 -3.20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1