data_2LQ5 # _entry.id 2LQ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LQ5 pdb_00002lq5 10.2210/pdb2lq5/pdb RCSB RCSB102693 ? ? BMRB 18292 ? ? WWPDB D_1000102693 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18292 BMRB unspecified . JCSG-421759 TargetTrack unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LQ5 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-23 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Serrano, P.' 1 'Dutta, S.K.' 2 'Geralt, M.' 3 'Wuthrich, K.' 4 'Joint Center for Structural Genomics (JCSG)' 5 'Partnership for T-Cell Biology (TCELL)' 6 # _citation.id primary _citation.title 'NMR structure of the RNA binding motif 39 (RBM39) from Mus musculus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serrano, P.' 1 ? primary 'Dutta, S.K.' 2 ? primary 'Geralt, M.' 3 ? primary 'Wuthrich, K.' 4 ? primary 'Joint Center for Structural Genomics (JCSG)' 5 ? primary 'Partnership for T-Cell Biology (TCELL)' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-binding protein 39' _entity.formula_weight 12516.202 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM 3 domain residues 418-530' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Coactivator of activating protein 1 and estrogen receptors, Coactivator of AP-1 and ERs, RNA-binding motif protein 39, RNA-binding region-containing protein 2, Transcription coactivator CAPER ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA GKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR ; _entity_poly.pdbx_seq_one_letter_code_can ;VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA GKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-421759 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 PRO n 1 4 LEU n 1 5 ALA n 1 6 THR n 1 7 GLN n 1 8 CYS n 1 9 PHE n 1 10 GLN n 1 11 LEU n 1 12 SER n 1 13 ASN n 1 14 MET n 1 15 PHE n 1 16 ASN n 1 17 PRO n 1 18 GLN n 1 19 THR n 1 20 GLU n 1 21 GLU n 1 22 GLU n 1 23 VAL n 1 24 GLY n 1 25 TRP n 1 26 ASP n 1 27 THR n 1 28 GLU n 1 29 ILE n 1 30 LYS n 1 31 ASP n 1 32 ASP n 1 33 VAL n 1 34 ILE n 1 35 GLU n 1 36 GLU n 1 37 CYS n 1 38 ASN n 1 39 LYS n 1 40 HIS n 1 41 GLY n 1 42 GLY n 1 43 VAL n 1 44 ILE n 1 45 HIS n 1 46 ILE n 1 47 TYR n 1 48 VAL n 1 49 ASP n 1 50 LYS n 1 51 ASN n 1 52 SER n 1 53 ALA n 1 54 GLN n 1 55 GLY n 1 56 ASN n 1 57 VAL n 1 58 TYR n 1 59 VAL n 1 60 LYS n 1 61 CYS n 1 62 PRO n 1 63 SER n 1 64 ILE n 1 65 ALA n 1 66 ALA n 1 67 ALA n 1 68 ILE n 1 69 ALA n 1 70 ALA n 1 71 VAL n 1 72 ASN n 1 73 ALA n 1 74 LEU n 1 75 HIS n 1 76 GLY n 1 77 ARG n 1 78 TRP n 1 79 PHE n 1 80 ALA n 1 81 GLY n 1 82 LYS n 1 83 MET n 1 84 ILE n 1 85 THR n 1 86 ALA n 1 87 ALA n 1 88 TYR n 1 89 VAL n 1 90 PRO n 1 91 LEU n 1 92 PRO n 1 93 THR n 1 94 TYR n 1 95 HIS n 1 96 ASN n 1 97 LEU n 1 98 PHE n 1 99 PRO n 1 100 ASP n 1 101 SER n 1 102 MET n 1 103 THR n 1 104 ALA n 1 105 THR n 1 106 GLN n 1 107 LEU n 1 108 LEU n 1 109 VAL n 1 110 PRO n 1 111 SER n 1 112 ARG n 1 113 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Rbm39, Caper, Rnpc2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pSpeedET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM39_MOUSE _struct_ref.pdbx_db_accession Q8VH51 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA GKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR ; _struct_ref.pdbx_align_begin 418 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LQ5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 113 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8VH51 _struct_ref_seq.db_align_beg 418 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 530 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 113 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-13C NOESY aliphatic' 1 3 1 '3D 1H-15N NOESY' 1 4 1 '3D 1H-13C NOESY aromatic' 1 5 1 '4D APSY HACANH' 1 6 1 '5D APSY CBCACONH' 1 7 1 '5D APSY HACACONH' 1 8 1 '2D 1H-13C HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.083 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1.2 mM [U-95% 13C; U-95% 15N] protein, 4.5 mM sodium azide, 50 mM sodium chloride, 25 mM sodium phosphate, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2LQ5 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LQ5 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LQ5 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Keller and Wuthrich' 'chemical shift assignment' CARA ? 1 'Keller and Wuthrich' 'data analysis' CARA ? 2 'Luginbuhl, Guntert, Billeter and Wuthrich' refinement OPALp ? 3 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 4 'Bruker Biospin' 'data analysis' TopSpin ? 5 'Bruker Biospin' collection TopSpin ? 6 'Bruker Biospin' processing TopSpin ? 7 'Unio Herrmann Wuthrich' 'chemical shift assignment' UNIO ? 8 'Unio Herrmann Wuthrich' 'structure solution' UNIO ? 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LQ5 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LQ5 _struct.title 'NMR structure of the RNA binding motif 39 (RBM39) from Mus musculus' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LQ5 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA binding domain, RNA BINDING PROTEIN, Structural Genomics, PSI-Biology, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 25 ? GLY A 41 ? TRP A 25 GLY A 41 1 ? 17 HELX_P HELX_P2 2 SER A 63 ? HIS A 75 ? SER A 63 HIS A 75 1 ? 13 HELX_P HELX_P3 3 PRO A 90 ? PHE A 98 ? PRO A 90 PHE A 98 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 45 ? TYR A 47 ? HIS A 45 TYR A 47 A 2 TYR A 58 ? LYS A 60 ? TYR A 58 LYS A 60 A 3 CYS A 8 ? LEU A 11 ? CYS A 8 LEU A 11 A 4 ALA A 86 ? TYR A 88 ? ALA A 86 TYR A 88 B 1 TRP A 78 ? PHE A 79 ? TRP A 78 PHE A 79 B 2 LYS A 82 ? MET A 83 ? LYS A 82 MET A 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 47 ? N TYR A 47 O TYR A 58 ? O TYR A 58 A 2 3 O VAL A 59 ? O VAL A 59 N PHE A 9 ? N PHE A 9 A 3 4 N GLN A 10 ? N GLN A 10 O ALA A 87 ? O ALA A 87 B 1 2 N PHE A 79 ? N PHE A 79 O LYS A 82 ? O LYS A 82 # _atom_sites.entry_id 2LQ5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 MET 14 14 14 MET MET A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 TRP 25 25 25 TRP TRP A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 CYS 61 61 61 CYS CYS A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 TRP 78 78 78 TRP TRP A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ARG 113 113 113 ARG ARG A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Joint Center for Structural Genomics' 1 JCSG PSI:Biology 'Partnership for T-Cell Biology' 2 TCELL PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-07 2 'Structure model' 1 1 2015-10-21 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 1.2 ? mM '[U-95% 13C; U-95% 15N]' 1 'sodium azide-2' 4.5 ? mM ? 1 'sodium chloride-3' 50 ? mM ? 1 'sodium phosphate-4' 25 ? mM ? 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 12 ? ? -150.08 35.22 2 1 ASN A 13 ? ? 178.00 82.10 3 1 MET A 14 ? ? -140.85 -11.00 4 1 GLU A 21 ? ? -149.72 17.42 5 1 HIS A 40 ? ? -99.09 -66.90 6 1 ASN A 51 ? ? -117.14 57.82 7 1 ALA A 80 ? ? -66.03 85.09 8 1 PHE A 98 ? ? -117.66 70.80 9 1 ALA A 104 ? ? -45.26 94.29 10 1 ARG A 112 ? ? -174.23 123.81 11 2 LEU A 4 ? ? -149.29 34.28 12 2 SER A 12 ? ? -147.38 59.49 13 2 ASN A 13 ? ? -179.10 4.57 14 2 GLU A 21 ? ? -148.01 16.20 15 2 ARG A 112 ? ? -166.91 119.79 16 3 SER A 12 ? ? -150.16 33.68 17 3 ASN A 13 ? ? -158.19 -0.09 18 3 GLU A 20 ? ? -68.21 11.91 19 3 LEU A 74 ? ? -124.45 -56.25 20 3 ALA A 80 ? ? -66.85 81.27 21 3 SER A 101 ? ? -68.95 8.73 22 3 ALA A 104 ? ? -57.48 106.06 23 3 ARG A 112 ? ? -160.66 113.25 24 4 SER A 12 ? ? -153.72 68.73 25 4 ASN A 13 ? ? 178.20 7.02 26 4 GLU A 20 ? ? -159.50 34.50 27 4 HIS A 45 ? ? -166.31 118.63 28 5 PRO A 3 ? ? -65.21 82.33 29 5 SER A 12 ? ? -157.16 49.72 30 5 ASN A 13 ? ? -165.37 -5.94 31 5 THR A 19 ? ? -112.95 56.83 32 5 GLU A 20 ? ? -154.29 87.37 33 5 TRP A 25 ? ? -66.49 3.85 34 5 HIS A 40 ? ? -120.19 -65.96 35 5 ALA A 80 ? ? -57.00 -6.54 36 5 ARG A 112 ? ? -173.97 122.02 37 6 LEU A 4 ? ? -153.72 33.38 38 6 SER A 12 ? ? -158.10 63.00 39 6 ASN A 13 ? ? 178.48 12.21 40 6 GLU A 21 ? ? -156.96 13.35 41 6 HIS A 45 ? ? -170.80 137.60 42 6 GLN A 54 ? ? -145.33 40.77 43 6 PHE A 79 ? ? -64.21 -178.80 44 6 ALA A 80 ? ? -67.64 27.95 45 6 PHE A 98 ? ? -117.82 72.31 46 6 ALA A 104 ? ? -66.52 96.61 47 7 SER A 12 ? ? -150.11 39.75 48 7 ASN A 13 ? ? -169.82 9.63 49 7 VAL A 23 ? ? -67.91 82.41 50 7 TRP A 25 ? ? -66.60 0.04 51 7 TYR A 47 ? ? -161.98 108.78 52 7 LYS A 50 ? ? -58.79 -6.89 53 7 PHE A 79 ? ? -69.15 -164.44 54 7 ALA A 80 ? ? -69.72 47.67 55 7 LYS A 82 ? ? 176.15 144.25 56 7 ARG A 112 ? ? -170.72 116.04 57 8 GLN A 2 ? ? -168.40 86.02 58 8 PRO A 3 ? ? -67.09 82.17 59 8 SER A 12 ? ? -149.10 35.30 60 8 ASN A 13 ? ? -176.19 72.72 61 8 THR A 19 ? ? -146.93 44.30 62 8 GLU A 21 ? ? -144.31 18.37 63 8 TYR A 47 ? ? -163.58 112.40 64 8 GLN A 54 ? ? -116.39 54.02 65 8 SER A 101 ? ? -68.57 9.19 66 8 ARG A 112 ? ? -146.52 14.04 67 9 LEU A 4 ? ? -151.77 33.90 68 9 ASN A 13 ? ? -172.34 1.25 69 9 TRP A 25 ? ? -57.68 -9.94 70 9 GLU A 28 ? ? -98.53 -64.48 71 9 PHE A 79 ? ? -66.65 -173.80 72 9 ALA A 80 ? ? -63.14 0.41 73 10 PRO A 3 ? ? -66.43 77.82 74 10 SER A 12 ? ? -150.71 42.73 75 10 ASN A 13 ? ? -166.85 10.96 76 10 THR A 19 ? ? -141.32 51.15 77 10 GLU A 21 ? ? -150.36 20.62 78 10 TRP A 25 ? ? -61.02 4.12 79 10 HIS A 40 ? ? -130.72 -52.71 80 10 ASN A 51 ? ? -79.92 34.77 81 10 ARG A 112 ? ? -163.85 111.11 82 11 GLN A 2 ? ? -154.95 73.18 83 11 SER A 12 ? ? -150.54 28.80 84 11 ASN A 13 ? ? -164.20 31.50 85 11 GLU A 21 ? ? -78.87 -163.70 86 11 GLU A 22 ? ? -72.83 -165.36 87 11 VAL A 23 ? ? -49.51 94.64 88 11 TRP A 25 ? ? -57.80 -5.09 89 11 ALA A 80 ? ? -63.15 82.62 90 11 ARG A 112 ? ? -176.41 92.04 91 12 SER A 12 ? ? -157.06 61.88 92 12 ASN A 13 ? ? -176.06 8.24 93 12 GLU A 20 ? ? -173.89 141.03 94 12 GLU A 21 ? ? -168.57 33.53 95 12 VAL A 23 ? ? -113.31 72.44 96 12 TRP A 25 ? ? -64.02 2.77 97 12 SER A 52 ? ? -59.30 178.58 98 12 SER A 111 ? ? -138.79 -35.79 99 12 ARG A 112 ? ? -177.35 125.01 100 13 GLN A 2 ? ? -153.70 74.71 101 13 LEU A 4 ? ? -155.79 32.21 102 13 SER A 12 ? ? -146.49 39.81 103 13 ASN A 13 ? ? -159.72 -4.31 104 13 THR A 19 ? ? -142.86 57.50 105 13 GLU A 21 ? ? -164.61 29.01 106 13 HIS A 40 ? ? -94.13 -74.68 107 13 ALA A 80 ? ? -61.03 87.28 108 13 ALA A 87 ? ? -157.49 20.26 109 13 TYR A 88 ? ? 49.99 -179.02 110 13 ARG A 112 ? ? -177.10 99.64 111 14 PRO A 3 ? ? -69.16 88.08 112 14 SER A 12 ? ? -150.25 52.84 113 14 ASN A 13 ? ? 172.73 81.08 114 14 VAL A 23 ? ? -68.05 75.72 115 14 ASN A 51 ? ? -91.22 40.86 116 14 GLN A 54 ? ? -142.15 43.57 117 15 SER A 12 ? ? -160.37 36.08 118 15 ASN A 13 ? ? -171.22 22.46 119 15 GLU A 21 ? ? -77.81 -165.96 120 15 TRP A 25 ? ? -59.66 -5.44 121 15 TYR A 47 ? ? -161.18 96.22 122 15 ASN A 51 ? ? -69.17 9.90 123 15 ALA A 80 ? ? -62.26 6.11 124 15 ARG A 112 ? ? -161.97 109.65 125 16 ALA A 5 ? ? -68.97 81.74 126 16 SER A 12 ? ? -156.50 53.03 127 16 ASN A 13 ? ? -177.69 23.08 128 16 GLU A 21 ? ? -148.21 17.60 129 16 HIS A 45 ? ? -174.56 145.01 130 16 ALA A 80 ? ? -62.87 5.07 131 16 THR A 103 ? ? -142.22 33.31 132 16 ALA A 104 ? ? -63.47 98.75 133 16 ARG A 112 ? ? -171.44 110.72 134 17 GLN A 7 ? ? -73.04 21.00 135 17 SER A 12 ? ? -154.60 35.87 136 17 ASN A 13 ? ? -168.05 27.86 137 17 GLU A 21 ? ? -123.05 -164.16 138 17 HIS A 40 ? ? -129.95 -61.17 139 17 SER A 52 ? ? -68.07 4.55 140 17 ALA A 53 ? ? 65.78 -36.12 141 17 PHE A 79 ? ? -114.16 -169.63 142 17 ALA A 80 ? ? -63.59 75.06 143 17 SER A 111 ? ? -123.76 -58.01 144 17 ARG A 112 ? ? -160.97 117.48 145 18 LEU A 4 ? ? -67.56 37.30 146 18 ALA A 5 ? ? -140.02 58.24 147 18 SER A 12 ? ? -143.62 21.16 148 18 ASN A 13 ? ? -169.16 70.14 149 18 THR A 19 ? ? -105.36 41.63 150 18 TYR A 47 ? ? -166.23 97.68 151 18 SER A 52 ? ? -67.07 -179.08 152 18 GLN A 54 ? ? -118.00 56.42 153 18 ALA A 80 ? ? -48.63 -7.21 154 18 ALA A 104 ? ? -65.03 98.52 155 18 ARG A 112 ? ? -171.16 112.04 156 19 LEU A 4 ? ? -151.23 34.91 157 19 GLN A 7 ? ? -77.80 29.16 158 19 SER A 12 ? ? -156.52 48.04 159 19 ASN A 13 ? ? -168.94 22.49 160 19 THR A 19 ? ? -149.73 48.94 161 19 TRP A 25 ? ? -57.80 2.00 162 19 GLU A 28 ? ? -70.04 -73.05 163 19 VAL A 48 ? ? -58.67 108.70 164 19 ASN A 51 ? ? -69.39 1.77 165 19 PHE A 79 ? ? -64.70 -171.21 166 19 ALA A 80 ? ? -62.07 83.69 167 19 ARG A 112 ? ? 174.79 125.40 168 20 GLN A 2 ? ? -154.71 86.12 169 20 SER A 12 ? ? -153.99 49.16 170 20 ASN A 13 ? ? 174.62 71.10 171 20 TRP A 25 ? ? -55.91 15.79 172 20 VAL A 43 ? ? -165.79 108.74 173 20 TYR A 47 ? ? -161.54 101.48 174 20 ARG A 112 ? ? 174.87 103.77 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 112 ? ? 0.080 'SIDE CHAIN' 2 2 TYR A 88 ? ? 0.072 'SIDE CHAIN' 3 5 TYR A 88 ? ? 0.076 'SIDE CHAIN' 4 6 TYR A 58 ? ? 0.068 'SIDE CHAIN' 5 7 PHE A 9 ? ? 0.084 'SIDE CHAIN' 6 7 ARG A 112 ? ? 0.078 'SIDE CHAIN' 7 8 ARG A 113 ? ? 0.087 'SIDE CHAIN' 8 9 TYR A 88 ? ? 0.081 'SIDE CHAIN' 9 9 TYR A 94 ? ? 0.068 'SIDE CHAIN' 10 9 ARG A 112 ? ? 0.103 'SIDE CHAIN' 11 11 TYR A 94 ? ? 0.116 'SIDE CHAIN' 12 12 TYR A 94 ? ? 0.065 'SIDE CHAIN' 13 13 ARG A 77 ? ? 0.087 'SIDE CHAIN' 14 13 ARG A 113 ? ? 0.132 'SIDE CHAIN' 15 14 ARG A 77 ? ? 0.078 'SIDE CHAIN' 16 16 TYR A 94 ? ? 0.084 'SIDE CHAIN' 17 16 ARG A 112 ? ? 0.087 'SIDE CHAIN' 18 18 ARG A 112 ? ? 0.080 'SIDE CHAIN' 19 19 TYR A 88 ? ? 0.091 'SIDE CHAIN' 20 19 ARG A 112 ? ? 0.151 'SIDE CHAIN' 21 20 HIS A 95 ? ? 0.092 'SIDE CHAIN' 22 20 ARG A 113 ? ? 0.138 'SIDE CHAIN' #