HEADER OXIDOREDUCTASE 10-APR-12 2LRN TITLE SOLUTION STRUCTURE OF A THIOL:DISULFIDE INTERCHANGE PROTEIN FROM TITLE 2 BACTEROIDES SP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 252-392; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES SP. 4_3_47FAA; SOURCE 3 ORGANISM_TAXID: 457394; SOURCE 4 GENE: BSFG_02257; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, THIOREDOXIN-LIKE, NEW YORK STRUCTURAL GENOMICS KEYWDS 2 RESEARCH CONSORTIUM, OXIDOREDUCTASE, PSI-BIOLOGY, NYSGRC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.HARRIS,A.D.BANDARANAYAKE,R.BANU,J.B.BONANNO,D.A.CALARESE, AUTHOR 2 A.CELIKGIL,S.CHAMALA,M.K.CHAN,R.CHAPARRO,B.EVANS,S.GARFORTH,A.GIZZI, AUTHOR 3 B.HILLERICH,A.KAR,J.LAFLEUR,S.LIM,J.LOVE,B.MATIKAINEN,H.PATEL, AUTHOR 4 R.D.SEIDEL,B.SMITH,M.STEAD,M.E.GIRVIN,S.C.ALMO,NEW YORK STRUCTURAL AUTHOR 5 GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 3 15-MAY-24 2LRN 1 REMARK REVDAT 2 14-JUN-23 2LRN 1 REMARK SEQADV REVDAT 1 25-APR-12 2LRN 0 JRNL AUTH R.HARRIS,A.D.BANDARANAYAKE,R.BANU,J.B.BONANNO,D.A.CALARESE, JRNL AUTH 2 A.CELIKGIL,S.CHAMALA,M.K.CHAN,R.CHAPARRO,B.EVANS,S.GARFORTH, JRNL AUTH 3 A.GIZZI,B.HILLERICH,A.KAR,J.LAFLEUR,S.LIM,J.LOVE, JRNL AUTH 4 B.MATIKAINEN,H.PATEL,R.D.SEIDEL,B.SMITH,M.STEAD,M.E.GIRVIN, JRNL AUTH 5 S.C.ALMO JRNL TITL SOLUTION STRUCTURE OF A THIOL:DISULFIDE INTERCHANGE PROTEIN JRNL TITL 2 FROM BACTEROIDES SP. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.21 REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT IN A BOX OF WATER REMARK 4 REMARK 4 2LRN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000102747. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 70 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] REMARK 210 THIOL:DISULFIDE INTERCHANGE REMARK 210 PROTEIN, 20 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 1 MM DTT, REMARK 210 1 MM EDTA, 90% H2O, 10% D2O; 1 REMARK 210 MM [U-13C; U-15N] THIOL: REMARK 210 DISULFIDE INTERCHANGE PROTEIN, REMARK 210 20 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 1 MM DTT, 1 MM REMARK 210 EDTA, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N HSQC; 15N NOESY-HSQC; 13C CT REMARK 210 -HSQC; AROMATIC 13C HSQC; 13C REMARK 210 NOESY-HSQC; 13C AROMATIC NOESY- REMARK 210 HSQC; HNCO; HNCACO; HNCOCA; REMARK 210 HNCACB; CBCACONH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.21, CCPN 2.1.5, ARIA 2.3, REMARK 210 NMRPIPE 5.4, MDDNMR 2.0, MDDGUI REMARK 210 1.0, VNMRJ 2.2D, TOPSPIN 2.1 REMARK 210 METHOD USED : SIMULATING ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 20 STRUCTURES FOR LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: 3D EXPERIMENTS ACQUIRED WITH NUS USING THE MDDNMR APPROACH REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB THR A 70 HB2 LEU A 93 1.23 REMARK 500 OE2 GLU A 74 HZ2 LYS A 78 1.53 REMARK 500 HZ3 LYS A 28 OE1 GLU A 119 1.55 REMARK 500 HZ3 LYS A 59 OD2 ASP A 60 1.57 REMARK 500 OE2 GLU A 119 HZ2 LYS A 121 1.58 REMARK 500 HD1 HIS A 149 OXT HIS A 152 1.59 REMARK 500 HH11 ARG A 45 OD2 ASP A 84 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 70 54.79 -145.87 REMARK 500 1 ASP A 71 -168.51 -68.63 REMARK 500 1 HIS A 147 79.29 37.13 REMARK 500 1 HIS A 150 -36.49 166.88 REMARK 500 2 ASN A 89 99.81 -68.49 REMARK 500 2 GLU A 145 1.25 54.41 REMARK 500 2 HIS A 149 -31.98 75.39 REMARK 500 2 HIS A 150 151.13 72.33 REMARK 500 3 LEU A 3 146.51 69.07 REMARK 500 3 THR A 70 42.22 -106.40 REMARK 500 3 HIS A 112 106.52 -166.89 REMARK 500 3 GLU A 145 31.65 -80.19 REMARK 500 3 HIS A 150 -81.88 -68.51 REMARK 500 4 SER A 2 -169.66 58.94 REMARK 500 4 LYS A 28 -174.11 -69.01 REMARK 500 4 LYS A 85 30.66 71.12 REMARK 500 4 TRP A 88 -140.81 -151.70 REMARK 500 4 GLU A 126 75.48 45.79 REMARK 500 4 LYS A 144 30.85 73.88 REMARK 500 4 HIS A 151 -72.26 72.09 REMARK 500 5 LEU A 3 -136.19 58.75 REMARK 500 5 THR A 70 59.85 -116.20 REMARK 500 5 ASP A 71 -178.57 -69.69 REMARK 500 5 ASN A 89 98.91 -69.48 REMARK 500 5 LYS A 144 77.81 63.82 REMARK 500 5 HIS A 147 -165.56 60.03 REMARK 500 6 SER A 2 -163.81 57.93 REMARK 500 6 ALA A 4 -91.12 -96.02 REMARK 500 6 ARG A 72 -71.67 -53.75 REMARK 500 6 LYS A 85 32.39 70.88 REMARK 500 6 TYR A 87 74.58 -118.13 REMARK 500 6 TRP A 88 -154.07 -133.94 REMARK 500 7 ALA A 4 -79.61 -128.02 REMARK 500 7 TRP A 88 -149.85 -141.04 REMARK 500 7 LYS A 144 -77.76 -95.30 REMARK 500 7 HIS A 151 -78.35 -119.89 REMARK 500 8 ALA A 4 -168.81 -105.73 REMARK 500 8 ASP A 60 -49.69 73.70 REMARK 500 8 LYS A 61 -88.33 -60.64 REMARK 500 8 TRP A 88 -159.66 -150.97 REMARK 500 8 GLU A 126 74.44 58.72 REMARK 500 8 HIS A 150 48.95 -151.84 REMARK 500 8 HIS A 151 -55.37 -173.62 REMARK 500 9 HIS A 147 109.33 -59.64 REMARK 500 10 SER A 2 -75.66 -133.26 REMARK 500 10 ALA A 4 -90.99 -135.25 REMARK 500 10 PHE A 38 149.25 -170.07 REMARK 500 10 LYS A 61 -161.96 -110.85 REMARK 500 10 ASP A 71 -176.50 -60.62 REMARK 500 10 HIS A 150 99.97 -169.90 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-011666 RELATED DB: TARGETDB REMARK 900 RELATED ID: 18387 RELATED DB: BMRB DBREF 2LRN A 4 144 UNP C6Z5F1 C6Z5F1_9BACE 252 392 SEQADV 2LRN MET A 1 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN SER A 2 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN LEU A 3 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN GLU A 145 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN GLY A 146 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 147 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 148 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 149 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 150 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 151 UNP C6Z5F1 EXPRESSION TAG SEQADV 2LRN HIS A 152 UNP C6Z5F1 EXPRESSION TAG SEQRES 1 A 152 MET SER LEU ALA THR GLY SER VAL ALA PRO ALA ILE THR SEQRES 2 A 152 GLY ILE ASP LEU LYS GLY ASN SER VAL SER LEU ASN ASP SEQRES 3 A 152 PHE LYS GLY LYS TYR VAL LEU VAL ASP PHE TRP PHE ALA SEQRES 4 A 152 GLY CYS SER TRP CYS ARG LYS GLU THR PRO TYR LEU LEU SEQRES 5 A 152 LYS THR TYR ASN ALA PHE LYS ASP LYS GLY PHE THR ILE SEQRES 6 A 152 TYR GLY VAL SER THR ASP ARG ARG GLU GLU ASP TRP LYS SEQRES 7 A 152 LYS ALA ILE GLU GLU ASP LYS SER TYR TRP ASN GLN VAL SEQRES 8 A 152 LEU LEU GLN LYS ASP ASP VAL LYS ASP VAL LEU GLU SER SEQRES 9 A 152 TYR CYS ILE VAL GLY PHE PRO HIS ILE ILE LEU VAL ASP SEQRES 10 A 152 PRO GLU GLY LYS ILE VAL ALA LYS GLU LEU ARG GLY ASP SEQRES 11 A 152 ASP LEU TYR ASN THR VAL GLU LYS PHE VAL ASN GLY ALA SEQRES 12 A 152 LYS GLU GLY HIS HIS HIS HIS HIS HIS HELIX 1 1 ASN A 25 LYS A 28 5 4 HELIX 2 2 TRP A 43 LYS A 59 1 17 HELIX 3 3 ARG A 73 LYS A 85 1 13 HELIX 4 4 GLN A 94 TYR A 105 1 12 HELIX 5 5 ASP A 130 ASN A 141 1 12 SHEET 1 A 8 SER A 7 VAL A 8 0 SHEET 2 A 8 LYS A 121 LYS A 125 -1 O ILE A 122 N SER A 7 SHEET 3 A 8 HIS A 112 VAL A 116 -1 N LEU A 115 O ALA A 124 SHEET 4 A 8 TYR A 31 TRP A 37 -1 N VAL A 32 O VAL A 116 SHEET 5 A 8 PHE A 63 SER A 69 1 O THR A 64 N TYR A 31 SHEET 6 A 8 ASN A 89 LEU A 93 1 O LEU A 93 N SER A 69 SHEET 7 A 8 THR A 13 ILE A 15 -1 N ILE A 15 O LEU A 92 SHEET 8 A 8 SER A 21 SER A 23 -1 O VAL A 22 N GLY A 14 CISPEP 1 PHE A 110 PRO A 111 1 -1.10 CISPEP 2 PHE A 110 PRO A 111 2 -0.16 CISPEP 3 PHE A 110 PRO A 111 3 -0.74 CISPEP 4 PHE A 110 PRO A 111 4 -0.50 CISPEP 5 PHE A 110 PRO A 111 5 -0.34 CISPEP 6 PHE A 110 PRO A 111 6 0.73 CISPEP 7 PHE A 110 PRO A 111 7 -1.23 CISPEP 8 PHE A 110 PRO A 111 8 -0.43 CISPEP 9 PHE A 110 PRO A 111 9 -0.09 CISPEP 10 PHE A 110 PRO A 111 10 -1.21 CISPEP 11 PHE A 110 PRO A 111 11 -0.27 CISPEP 12 PHE A 110 PRO A 111 12 -0.33 CISPEP 13 PHE A 110 PRO A 111 13 2.33 CISPEP 14 PHE A 110 PRO A 111 14 -1.34 CISPEP 15 PHE A 110 PRO A 111 15 0.07 CISPEP 16 PHE A 110 PRO A 111 16 -0.96 CISPEP 17 PHE A 110 PRO A 111 17 0.65 CISPEP 18 PHE A 110 PRO A 111 18 -0.43 CISPEP 19 PHE A 110 PRO A 111 19 -0.81 CISPEP 20 PHE A 110 PRO A 111 20 0.13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1