HEADER RNA BINDING PROTEIN 01-MAY-12 2LSL TITLE SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF TETRAHYMENA TELOMERASE TITLE 2 PROTEIN P65 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERASE ASSOCIATED PROTEIN P65; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 5911; SOURCE 4 GENE: TAP65; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET30 LIC KEYWDS TELOMERASE, P65, LA PROTEIN, LARP7, RRM, TETRAHYMENA, RNA BINDING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SINGH,Z.WANG,B.KOO,A.PATEL,D.CASCIO,K.COLLINS,J.FEIGON REVDAT 4 14-JUN-23 2LSL 1 REMARK SEQADV REVDAT 3 01-AUG-12 2LSL 1 JRNL REVDAT 2 25-JUL-12 2LSL 1 JRNL REVDAT 1 20-JUN-12 2LSL 0 JRNL AUTH M.SINGH,Z.WANG,B.K.KOO,A.PATEL,D.CASCIO,K.COLLINS,J.FEIGON JRNL TITL STRUCTURAL BASIS FOR TELOMERASE RNA RECOGNITION AND RNP JRNL TITL 2 ASSEMBLY BY THE HOLOENZYME LA FAMILY PROTEIN P65. JRNL REF MOL.CELL V. 47 16 2012 JRNL REFN ISSN 1097-2765 JRNL PMID 22705372 JRNL DOI 10.1016/J.MOLCEL.2012.05.018 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, X-PLOR NIH REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000102781. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 90 % H2O, 10 % [U-100% 2H] D2O, REMARK 210 20 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 1 MM DTT, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 100 % [U-100% 2H] D2O, 20 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 1 MM DTT, 0.01 % REMARK 210 SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HNCO; 3D HNCACO; REMARK 210 3D HBHA(CO)NH; 3D H(CCO)NH; 3D REMARK 210 HCCH-TOCSY; 3D HCCH-COSY; 3D 1H- REMARK 210 13C NOESY; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH, SPARKY, TOPSPIN, REMARK 210 NMRDRAW REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 407 H ARG A 465 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 377 -61.92 -103.56 REMARK 500 1 CYS A 379 22.55 -64.46 REMARK 500 1 ASN A 385 62.51 66.97 REMARK 500 1 THR A 390 123.65 -33.77 REMARK 500 1 LEU A 402 -78.52 -57.98 REMARK 500 1 ASN A 414 -146.09 -74.71 REMARK 500 1 SER A 415 74.86 -57.56 REMARK 500 1 GLN A 417 -144.16 -74.21 REMARK 500 1 ASN A 443 -150.31 37.10 REMARK 500 1 GLN A 447 -150.37 -72.51 REMARK 500 1 ASN A 454 41.80 -73.23 REMARK 500 1 ASP A 455 -72.45 -56.73 REMARK 500 1 GLU A 459 107.49 46.02 REMARK 500 1 ASN A 481 -159.28 80.13 REMARK 500 1 ASN A 484 -93.80 -63.50 REMARK 500 1 ASN A 485 174.41 63.78 REMARK 500 1 LYS A 518 -75.86 -102.07 REMARK 500 2 CYS A 379 23.18 -61.25 REMARK 500 2 ASN A 385 62.24 66.83 REMARK 500 2 THR A 390 125.97 -33.36 REMARK 500 2 LEU A 402 -79.37 -58.87 REMARK 500 2 ASN A 414 -89.46 -62.48 REMARK 500 2 SER A 415 -76.42 -68.22 REMARK 500 2 ASN A 416 85.50 -62.69 REMARK 500 2 GLN A 417 -91.49 -111.89 REMARK 500 2 SER A 420 -163.59 -74.27 REMARK 500 2 ASN A 443 -173.10 -52.59 REMARK 500 2 GLN A 447 -144.06 -77.62 REMARK 500 2 ASN A 454 60.21 -51.55 REMARK 500 2 LEU A 456 -93.46 -113.64 REMARK 500 2 ASN A 481 -71.31 65.22 REMARK 500 2 HIS A 482 -79.25 -139.10 REMARK 500 2 ASN A 483 100.38 -178.59 REMARK 500 2 ASN A 484 137.92 154.24 REMARK 500 2 ASN A 485 165.22 72.66 REMARK 500 2 LYS A 518 -75.86 -103.03 REMARK 500 3 GLN A 377 -63.82 -103.80 REMARK 500 3 CYS A 379 23.21 -64.17 REMARK 500 3 ASN A 385 62.85 65.51 REMARK 500 3 THR A 390 130.21 -36.34 REMARK 500 3 LEU A 402 -79.28 -59.36 REMARK 500 3 SER A 415 77.33 -63.83 REMARK 500 3 GLN A 417 -170.18 -53.14 REMARK 500 3 SER A 420 94.71 -68.40 REMARK 500 3 ASN A 443 -121.10 16.48 REMARK 500 3 ASN A 454 47.71 -67.33 REMARK 500 3 LEU A 456 44.04 -99.59 REMARK 500 3 GLU A 459 113.67 51.34 REMARK 500 3 ASN A 481 -76.19 76.48 REMARK 500 3 HIS A 482 -73.48 -138.98 REMARK 500 REMARK 500 THIS ENTRY HAS 342 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ERD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P65 C-TERMINAL XRRM2 DOMAIN IN COMPLEX WITH REMARK 900 STEM IV OF TELOMERASE RNA REMARK 900 RELATED ID: 4EYT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P65 C-TERMINAL XRRM2 DOMAIN REMARK 900 RELATED ID: 18435 RELATED DB: BMRB DBREF 2LSL A 369 519 UNP Q6JXI6 Q6JXI6_TETTH 369 519 SEQADV 2LSL MET A 361 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 362 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 363 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 364 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 365 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 366 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL HIS A 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL SER A 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 2LSL A UNP Q6JXI6 ASN 421 DELETION SEQADV 2LSL A UNP Q6JXI6 LYS 422 DELETION SEQADV 2LSL A UNP Q6JXI6 ILE 423 DELETION SEQADV 2LSL A UNP Q6JXI6 SER 424 DELETION SEQADV 2LSL A UNP Q6JXI6 LEU 425 DELETION SEQADV 2LSL A UNP Q6JXI6 SER 426 DELETION SEQADV 2LSL A UNP Q6JXI6 THR 427 DELETION SEQADV 2LSL A UNP Q6JXI6 GLN 428 DELETION SEQADV 2LSL A UNP Q6JXI6 GLN 429 DELETION SEQADV 2LSL A UNP Q6JXI6 GLN 430 DELETION SEQADV 2LSL A UNP Q6JXI6 ASN 431 DELETION SEQADV 2LSL A UNP Q6JXI6 THR 432 DELETION SEQADV 2LSL A UNP Q6JXI6 ALA 433 DELETION SEQADV 2LSL A UNP Q6JXI6 GLN 434 DELETION SEQADV 2LSL A UNP Q6JXI6 CYS 435 DELETION SEQADV 2LSL A UNP Q6JXI6 SER 436 DELETION SEQADV 2LSL A UNP Q6JXI6 ASN 437 DELETION SEQADV 2LSL A UNP Q6JXI6 ILE 438 DELETION SEQADV 2LSL A UNP Q6JXI6 GLN 439 DELETION SEQADV 2LSL A UNP Q6JXI6 ILE 440 DELETION SEQADV 2LSL A UNP Q6JXI6 GLU 441 DELETION SEQADV 2LSL A UNP Q6JXI6 ASN 442 DELETION SEQRES 1 A 137 MET HIS HIS HIS HIS HIS HIS SER VAL SER ILE ASP VAL SEQRES 2 A 137 GLU ILE LYS GLN ASN CYS LEU ILE LYS ILE ILE ASN ILE SEQRES 3 A 137 PRO GLN GLY THR LEU LYS ALA GLU VAL VAL LEU ALA VAL SEQRES 4 A 137 ARG HIS LEU GLY TYR GLU PHE TYR CYS ASP TYR ILE ASP SEQRES 5 A 137 GLU ASN SER ASN GLN ILE ASN SER ASN LEU ILE GLN GLN SEQRES 6 A 137 ASP GLN HIS PRO GLN LEU ASN ASP LEU LEU LYS GLU GLY SEQRES 7 A 137 GLN ALA MET ILE ARG PHE GLN ASN SER ASP GLU GLN ARG SEQRES 8 A 137 LEU ALA ILE GLN LYS LEU LEU ASN HIS ASN ASN ASN LYS SEQRES 9 A 137 LEU GLN ILE GLU ILE ARG GLY GLN ILE CYS ASP VAL ILE SEQRES 10 A 137 SER THR ILE PRO GLU ASP GLU GLU LYS ASN TYR TRP ASN SEQRES 11 A 137 TYR ILE LYS PHE LYS LYS ASN HELIX 1 1 LEU A 391 HIS A 401 1 11 HELIX 2 2 ASN A 468 ASN A 481 1 14 HELIX 3 3 PRO A 503 LYS A 518 1 16 SHEET 1 A 5 CYS A 408 TYR A 410 0 SHEET 2 A 5 ALA A 462 ARG A 465 -1 O MET A 463 N ASP A 409 SHEET 3 A 5 LEU A 380 ILE A 384 -1 N ILE A 383 O ALA A 462 SHEET 4 A 5 GLN A 494 ILE A 499 -1 O ILE A 499 N LYS A 382 SHEET 5 A 5 GLN A 488 ILE A 491 -1 N ILE A 489 O CYS A 496 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1