data_2LV4 # _entry.id 2LV4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LV4 pdb_00002lv4 10.2210/pdb2lv4/pdb RCSB RCSB102871 ? ? BMRB 18553 ? ? WWPDB D_1000102871 ? ? # _pdbx_database_related.db_id 18553 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LV4 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-06-28 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Prehna, G.' 1 'Li, Y.' 2 'Stoynov, N.' 3 'Okon, M.' 4 'Vukovic, M.' 5 'Mcintosh, L.P.' 6 'Foster, L.J.' 7 'Finlay, B.' 8 'Strynadka, N.C.J.' 9 # _citation.id primary _citation.title 'The zinc regulated antivirulence pathway of salmonella is a multiprotein immunoglobulin adhesion system.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 287 _citation.page_first 32324 _citation.page_last 32337 _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22810234 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.357210 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Prehna, G.' 1 ? primary 'Li, Y.' 2 ? primary 'Stoynov, N.' 3 ? primary 'Okon, M.' 4 ? primary 'Vuckovic, M.' 5 ? primary 'McIntosh, L.P.' 6 ? primary 'Foster, L.J.' 7 ? primary 'Finlay, B.B.' 8 ? primary 'Strynadka, N.C.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Putative outer membrane or exported protein' _entity.formula_weight 16105.110 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-terminal residues 136-276' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSGSKIKLEIYNETDMASASGYTPVPSVSEFQYIETETISNTPSPDLTVMSIDKSVLSPGESATITTIVKDIDGNPV NEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRGRL ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSGSKIKLEIYNETDMASASGYTPVPSVSEFQYIETETISNTPSPDLTVMSIDKSVLSPGESATITTIVKDIDGNPV NEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRGRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLY n 1 7 SER n 1 8 LYS n 1 9 ILE n 1 10 LYS n 1 11 LEU n 1 12 GLU n 1 13 ILE n 1 14 TYR n 1 15 ASN n 1 16 GLU n 1 17 THR n 1 18 ASP n 1 19 MET n 1 20 ALA n 1 21 SER n 1 22 ALA n 1 23 SER n 1 24 GLY n 1 25 TYR n 1 26 THR n 1 27 PRO n 1 28 VAL n 1 29 PRO n 1 30 SER n 1 31 VAL n 1 32 SER n 1 33 GLU n 1 34 PHE n 1 35 GLN n 1 36 TYR n 1 37 ILE n 1 38 GLU n 1 39 THR n 1 40 GLU n 1 41 THR n 1 42 ILE n 1 43 SER n 1 44 ASN n 1 45 THR n 1 46 PRO n 1 47 SER n 1 48 PRO n 1 49 ASP n 1 50 LEU n 1 51 THR n 1 52 VAL n 1 53 MET n 1 54 SER n 1 55 ILE n 1 56 ASP n 1 57 LYS n 1 58 SER n 1 59 VAL n 1 60 LEU n 1 61 SER n 1 62 PRO n 1 63 GLY n 1 64 GLU n 1 65 SER n 1 66 ALA n 1 67 THR n 1 68 ILE n 1 69 THR n 1 70 THR n 1 71 ILE n 1 72 VAL n 1 73 LYS n 1 74 ASP n 1 75 ILE n 1 76 ASP n 1 77 GLY n 1 78 ASN n 1 79 PRO n 1 80 VAL n 1 81 ASN n 1 82 GLU n 1 83 VAL n 1 84 HIS n 1 85 ILE n 1 86 ASN n 1 87 LYS n 1 88 THR n 1 89 VAL n 1 90 ALA n 1 91 ARG n 1 92 GLU n 1 93 ASN n 1 94 LEU n 1 95 LYS n 1 96 GLY n 1 97 LEU n 1 98 TRP n 1 99 ASP n 1 100 TYR n 1 101 GLY n 1 102 PRO n 1 103 LEU n 1 104 LYS n 1 105 LYS n 1 106 GLU n 1 107 ASN n 1 108 VAL n 1 109 PRO n 1 110 GLY n 1 111 LYS n 1 112 TYR n 1 113 THR n 1 114 GLN n 1 115 VAL n 1 116 ILE n 1 117 THR n 1 118 TYR n 1 119 ARG n 1 120 GLY n 1 121 HIS n 1 122 SER n 1 123 ASN n 1 124 GLU n 1 125 ARG n 1 126 ILE n 1 127 ASP n 1 128 ILE n 1 129 SER n 1 130 PHE n 1 131 LYS n 1 132 TYR n 1 133 ALA n 1 134 MET n 1 135 SER n 1 136 PHE n 1 137 THR n 1 138 LYS n 1 139 GLU n 1 140 ILE n 1 141 SER n 1 142 ILE n 1 143 ARG n 1 144 GLY n 1 145 ARG n 1 146 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene STM1668 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'LT2 / SGSC1412 / ATCC 700720' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella enterica subsp. enterica serovar Typhimurium str. LT2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 99287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pGEX6P1 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8ZP79_SALTY _struct_ref.pdbx_db_accession Q8ZP79 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSKIKLEIYNETDMASASGYTPVPSVSEFQYIETETISNTPSPDLTVMSIDKSVLSPGESATITTIVKDIDGNPVNEVHI NKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRGRL ; _struct_ref.pdbx_align_begin 136 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LV4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 146 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8ZP79 _struct_ref_seq.db_align_beg 136 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 276 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 136 _struct_ref_seq.pdbx_auth_seq_align_end 276 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2LV4 GLY A 1 ? UNP Q8ZP79 ? ? 'expression tag' 131 1 1 2LV4 PRO A 2 ? UNP Q8ZP79 ? ? 'expression tag' 132 2 1 2LV4 LEU A 3 ? UNP Q8ZP79 ? ? 'expression tag' 133 3 1 2LV4 GLY A 4 ? UNP Q8ZP79 ? ? 'expression tag' 134 4 1 2LV4 SER A 5 ? UNP Q8ZP79 ? ? 'expression tag' 135 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D HNCACB' 1 2 1 '3D CBCA(CO)NH' 1 3 1 '3D HNCO' 1 4 1 HNCACO 1 5 1 '2D 1H-15N HSQC' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '3D 1H-15N NOESY' 1 8 1 '3D 1H-13C NOESY' 1 9 1 CCC-TOCSY-NNH 1 10 1 CT-HSQC 1 11 1 '(HB)CB(CGCD)HD_aromatic' 1 12 1 HBCBGCCC-TOCSY 1 13 1 HCC-TOCSY-NNH # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.05 _pdbx_nmr_exptl_sample_conditions.pH 7.1 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.5 mM [U-100% 13C; U-100% 15N] ZirS, 50 mM TRIS, 50 mM sodium chloride, 0.1 mM TCEP, 0.1 mM PMSF, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian UNITY 1 'Varian Unity' 600 Varian UNITY 2 'Varian Unity' # _pdbx_nmr_refine.entry_id 2LV4 _pdbx_nmr_refine.method 'simulated annealing, distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LV4 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LV4 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRDraw ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 Goddard 'chemical shift assignment' Sparky ? 3 Goddard 'peak picking' Sparky ? 4 'Cornilescu, Delaglio and Bax' 'geometry optimization' TALOS ? 5 'Cornilescu, Delaglio and Bax' 'structure solution' TALOS ? 6 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 7 'Guntert, Mumenthaler and Wuthrich' refinement CYANA ? 8 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNSSOLVE ? 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LV4 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LV4 _struct.title 'ZirS C-terminal Domain' _struct.pdbx_model_details 'closest to the average, model 8' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LV4 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Antivirulence, Adhesion, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 47 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 51 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 177 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 181 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 52 ? SER A 54 ? VAL A 182 SER A 184 A 2 SER A 65 ? ILE A 71 ? SER A 195 ILE A 201 A 3 LYS A 111 ? ARG A 119 ? LYS A 241 ARG A 249 A 4 LEU A 97 ? TYR A 100 ? LEU A 227 TYR A 230 B 1 VAL A 52 ? SER A 54 ? VAL A 182 SER A 184 B 2 SER A 65 ? ILE A 71 ? SER A 195 ILE A 201 B 3 LYS A 111 ? ARG A 119 ? LYS A 241 ARG A 249 B 4 LYS A 104 ? LYS A 105 ? LYS A 234 LYS A 235 C 1 ASN A 86 ? ARG A 91 ? ASN A 216 ARG A 221 C 2 ARG A 125 ? LYS A 131 ? ARG A 255 LYS A 261 C 3 THR A 137 ? ARG A 143 ? THR A 267 ARG A 273 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 54 ? N SER A 184 O THR A 69 ? O THR A 199 A 2 3 N THR A 70 ? N THR A 200 O TYR A 112 ? O TYR A 242 A 3 4 O THR A 117 ? O THR A 247 N ASP A 99 ? N ASP A 229 B 1 2 N SER A 54 ? N SER A 184 O THR A 69 ? O THR A 199 B 2 3 N THR A 70 ? N THR A 200 O TYR A 112 ? O TYR A 242 B 3 4 O THR A 113 ? O THR A 243 N LYS A 104 ? N LYS A 234 C 1 2 N ALA A 90 ? N ALA A 220 O ASP A 127 ? O ASP A 257 C 2 3 N ILE A 126 ? N ILE A 256 O ILE A 142 ? O ILE A 272 # _atom_sites.entry_id 2LV4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 131 131 GLY GLY A . n A 1 2 PRO 2 132 132 PRO PRO A . n A 1 3 LEU 3 133 133 LEU LEU A . n A 1 4 GLY 4 134 134 GLY GLY A . n A 1 5 SER 5 135 135 SER SER A . n A 1 6 GLY 6 136 136 GLY GLY A . n A 1 7 SER 7 137 137 SER SER A . n A 1 8 LYS 8 138 138 LYS LYS A . n A 1 9 ILE 9 139 139 ILE ILE A . n A 1 10 LYS 10 140 140 LYS LYS A . n A 1 11 LEU 11 141 141 LEU LEU A . n A 1 12 GLU 12 142 142 GLU GLU A . n A 1 13 ILE 13 143 143 ILE ILE A . n A 1 14 TYR 14 144 144 TYR TYR A . n A 1 15 ASN 15 145 145 ASN ASN A . n A 1 16 GLU 16 146 146 GLU GLU A . n A 1 17 THR 17 147 147 THR THR A . n A 1 18 ASP 18 148 148 ASP ASP A . n A 1 19 MET 19 149 149 MET MET A . n A 1 20 ALA 20 150 150 ALA ALA A . n A 1 21 SER 21 151 151 SER SER A . n A 1 22 ALA 22 152 152 ALA ALA A . n A 1 23 SER 23 153 153 SER SER A . n A 1 24 GLY 24 154 154 GLY GLY A . n A 1 25 TYR 25 155 155 TYR TYR A . n A 1 26 THR 26 156 156 THR THR A . n A 1 27 PRO 27 157 157 PRO PRO A . n A 1 28 VAL 28 158 158 VAL VAL A . n A 1 29 PRO 29 159 159 PRO PRO A . n A 1 30 SER 30 160 160 SER SER A . n A 1 31 VAL 31 161 161 VAL VAL A . n A 1 32 SER 32 162 162 SER SER A . n A 1 33 GLU 33 163 163 GLU GLU A . n A 1 34 PHE 34 164 164 PHE PHE A . n A 1 35 GLN 35 165 165 GLN GLN A . n A 1 36 TYR 36 166 166 TYR TYR A . n A 1 37 ILE 37 167 167 ILE ILE A . n A 1 38 GLU 38 168 168 GLU GLU A . n A 1 39 THR 39 169 169 THR THR A . n A 1 40 GLU 40 170 170 GLU GLU A . n A 1 41 THR 41 171 171 THR THR A . n A 1 42 ILE 42 172 172 ILE ILE A . n A 1 43 SER 43 173 173 SER SER A . n A 1 44 ASN 44 174 174 ASN ASN A . n A 1 45 THR 45 175 175 THR THR A . n A 1 46 PRO 46 176 176 PRO PRO A . n A 1 47 SER 47 177 177 SER SER A . n A 1 48 PRO 48 178 178 PRO PRO A . n A 1 49 ASP 49 179 179 ASP ASP A . n A 1 50 LEU 50 180 180 LEU LEU A . n A 1 51 THR 51 181 181 THR THR A . n A 1 52 VAL 52 182 182 VAL VAL A . n A 1 53 MET 53 183 183 MET MET A . n A 1 54 SER 54 184 184 SER SER A . n A 1 55 ILE 55 185 185 ILE ILE A . n A 1 56 ASP 56 186 186 ASP ASP A . n A 1 57 LYS 57 187 187 LYS LYS A . n A 1 58 SER 58 188 188 SER SER A . n A 1 59 VAL 59 189 189 VAL VAL A . n A 1 60 LEU 60 190 190 LEU LEU A . n A 1 61 SER 61 191 191 SER SER A . n A 1 62 PRO 62 192 192 PRO PRO A . n A 1 63 GLY 63 193 193 GLY GLY A . n A 1 64 GLU 64 194 194 GLU GLU A . n A 1 65 SER 65 195 195 SER SER A . n A 1 66 ALA 66 196 196 ALA ALA A . n A 1 67 THR 67 197 197 THR THR A . n A 1 68 ILE 68 198 198 ILE ILE A . n A 1 69 THR 69 199 199 THR THR A . n A 1 70 THR 70 200 200 THR THR A . n A 1 71 ILE 71 201 201 ILE ILE A . n A 1 72 VAL 72 202 202 VAL VAL A . n A 1 73 LYS 73 203 203 LYS LYS A . n A 1 74 ASP 74 204 204 ASP ASP A . n A 1 75 ILE 75 205 205 ILE ILE A . n A 1 76 ASP 76 206 206 ASP ASP A . n A 1 77 GLY 77 207 207 GLY GLY A . n A 1 78 ASN 78 208 208 ASN ASN A . n A 1 79 PRO 79 209 209 PRO PRO A . n A 1 80 VAL 80 210 210 VAL VAL A . n A 1 81 ASN 81 211 211 ASN ASN A . n A 1 82 GLU 82 212 212 GLU GLU A . n A 1 83 VAL 83 213 213 VAL VAL A . n A 1 84 HIS 84 214 214 HIS HIS A . n A 1 85 ILE 85 215 215 ILE ILE A . n A 1 86 ASN 86 216 216 ASN ASN A . n A 1 87 LYS 87 217 217 LYS LYS A . n A 1 88 THR 88 218 218 THR THR A . n A 1 89 VAL 89 219 219 VAL VAL A . n A 1 90 ALA 90 220 220 ALA ALA A . n A 1 91 ARG 91 221 221 ARG ARG A . n A 1 92 GLU 92 222 222 GLU GLU A . n A 1 93 ASN 93 223 223 ASN ASN A . n A 1 94 LEU 94 224 224 LEU LEU A . n A 1 95 LYS 95 225 225 LYS LYS A . n A 1 96 GLY 96 226 226 GLY GLY A . n A 1 97 LEU 97 227 227 LEU LEU A . n A 1 98 TRP 98 228 228 TRP TRP A . n A 1 99 ASP 99 229 229 ASP ASP A . n A 1 100 TYR 100 230 230 TYR TYR A . n A 1 101 GLY 101 231 231 GLY GLY A . n A 1 102 PRO 102 232 232 PRO PRO A . n A 1 103 LEU 103 233 233 LEU LEU A . n A 1 104 LYS 104 234 234 LYS LYS A . n A 1 105 LYS 105 235 235 LYS LYS A . n A 1 106 GLU 106 236 236 GLU GLU A . n A 1 107 ASN 107 237 237 ASN ASN A . n A 1 108 VAL 108 238 238 VAL VAL A . n A 1 109 PRO 109 239 239 PRO PRO A . n A 1 110 GLY 110 240 240 GLY GLY A . n A 1 111 LYS 111 241 241 LYS LYS A . n A 1 112 TYR 112 242 242 TYR TYR A . n A 1 113 THR 113 243 243 THR THR A . n A 1 114 GLN 114 244 244 GLN GLN A . n A 1 115 VAL 115 245 245 VAL VAL A . n A 1 116 ILE 116 246 246 ILE ILE A . n A 1 117 THR 117 247 247 THR THR A . n A 1 118 TYR 118 248 248 TYR TYR A . n A 1 119 ARG 119 249 249 ARG ARG A . n A 1 120 GLY 120 250 250 GLY GLY A . n A 1 121 HIS 121 251 251 HIS HIS A . n A 1 122 SER 122 252 252 SER SER A . n A 1 123 ASN 123 253 253 ASN ASN A . n A 1 124 GLU 124 254 254 GLU GLU A . n A 1 125 ARG 125 255 255 ARG ARG A . n A 1 126 ILE 126 256 256 ILE ILE A . n A 1 127 ASP 127 257 257 ASP ASP A . n A 1 128 ILE 128 258 258 ILE ILE A . n A 1 129 SER 129 259 259 SER SER A . n A 1 130 PHE 130 260 260 PHE PHE A . n A 1 131 LYS 131 261 261 LYS LYS A . n A 1 132 TYR 132 262 262 TYR TYR A . n A 1 133 ALA 133 263 263 ALA ALA A . n A 1 134 MET 134 264 264 MET MET A . n A 1 135 SER 135 265 265 SER SER A . n A 1 136 PHE 136 266 266 PHE PHE A . n A 1 137 THR 137 267 267 THR THR A . n A 1 138 LYS 138 268 268 LYS LYS A . n A 1 139 GLU 139 269 269 GLU GLU A . n A 1 140 ILE 140 270 270 ILE ILE A . n A 1 141 SER 141 271 271 SER SER A . n A 1 142 ILE 142 272 272 ILE ILE A . n A 1 143 ARG 143 273 273 ARG ARG A . n A 1 144 GLY 144 274 274 GLY GLY A . n A 1 145 ARG 145 275 275 ARG ARG A . n A 1 146 LEU 146 276 276 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-22 2 'Structure model' 1 1 2012-10-10 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ZirS-1 0.5 ? mM '[U-100% 13C; U-100% 15N]' 1 TRIS-2 50 ? mM ? 1 'sodium chloride-3' 50 ? mM ? 1 TCEP-4 0.1 ? mM ? 1 PMSF-5 0.1 ? mM ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 HD22 A LEU 190 ? ? HB2 A ALA 196 ? ? 1.23 2 3 HG21 A ILE 167 ? ? HA A THR 171 ? ? 1.33 3 3 HZ3 A LYS 187 ? ? OE1 A GLU 194 ? ? 1.55 4 4 HB2 A ASN 253 ? ? HB2 A LEU 276 ? ? 1.26 5 4 HH A TYR 248 ? ? HG21 A ILE 256 ? ? 1.30 6 5 HG21 A VAL 161 ? ? H A SER 162 ? ? 1.34 7 8 HD22 A LEU 190 ? ? HB1 A ALA 196 ? ? 1.27 8 10 HA A ILE 167 ? ? HA A THR 171 ? ? 1.33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 145 ? ? 39.35 91.11 2 1 VAL A 161 ? ? -105.92 -154.98 3 1 SER A 162 ? ? -125.96 -166.88 4 1 THR A 169 ? ? -142.24 -50.20 5 1 GLU A 170 ? ? -92.11 47.57 6 1 ASN A 174 ? ? -78.78 -162.06 7 1 SER A 177 ? ? -160.18 118.59 8 1 ASP A 186 ? ? -111.00 72.61 9 1 LYS A 187 ? ? -179.37 90.48 10 1 SER A 188 ? ? -93.91 57.89 11 1 PRO A 192 ? ? -59.76 99.71 12 1 LEU A 227 ? ? -109.79 78.31 13 1 TYR A 262 ? ? -76.30 -144.81 14 1 SER A 265 ? ? -150.40 -51.91 15 2 ALA A 150 ? ? -144.71 -69.08 16 2 THR A 169 ? ? -137.87 -31.43 17 2 THR A 171 ? ? 41.64 75.32 18 2 ASP A 186 ? ? -108.64 76.06 19 2 LYS A 187 ? ? -175.11 75.20 20 2 SER A 188 ? ? -97.31 52.34 21 2 PRO A 192 ? ? -53.90 101.01 22 2 PRO A 239 ? ? -64.36 94.97 23 2 HIS A 251 ? ? -132.01 -61.75 24 2 TYR A 262 ? ? -83.27 -145.49 25 2 SER A 265 ? ? -149.71 -49.93 26 3 ALA A 150 ? ? -169.90 109.48 27 3 THR A 169 ? ? -139.81 -39.12 28 3 GLU A 170 ? ? -86.19 33.32 29 3 SER A 184 ? ? -171.43 -177.50 30 3 ASP A 186 ? ? -92.90 32.92 31 3 LYS A 187 ? ? -155.74 89.09 32 3 PRO A 192 ? ? -56.27 105.65 33 3 PRO A 239 ? ? -69.55 93.36 34 3 TYR A 262 ? ? -75.68 -154.42 35 3 SER A 265 ? ? -150.81 -35.42 36 4 LEU A 133 ? ? 61.97 89.76 37 4 SER A 137 ? ? 46.88 74.66 38 4 ALA A 150 ? ? -119.58 -150.45 39 4 THR A 169 ? ? 80.73 -39.93 40 4 GLU A 170 ? ? -106.85 71.67 41 4 THR A 171 ? ? -55.37 -179.38 42 4 ASP A 186 ? ? -113.15 64.89 43 4 LYS A 187 ? ? -169.41 78.40 44 4 PRO A 192 ? ? -59.35 89.24 45 4 GLU A 212 ? ? -176.00 146.92 46 4 THR A 218 ? ? -160.06 94.35 47 4 PRO A 239 ? ? -68.62 79.24 48 4 TYR A 262 ? ? -75.74 -157.04 49 4 SER A 265 ? ? -151.47 -46.08 50 5 LYS A 138 ? ? -111.82 -163.73 51 5 ALA A 150 ? ? -92.59 -139.32 52 5 THR A 169 ? ? -148.49 -36.36 53 5 VAL A 189 ? ? -173.26 105.01 54 5 PRO A 192 ? ? -55.51 104.00 55 5 PRO A 239 ? ? -65.22 91.59 56 5 TYR A 262 ? ? -76.59 -152.60 57 5 SER A 265 ? ? -145.70 -44.59 58 6 THR A 169 ? ? 80.88 -24.69 59 6 ASP A 186 ? ? -98.58 54.39 60 6 PRO A 192 ? ? -68.82 11.09 61 6 PRO A 232 ? ? -56.53 -77.74 62 6 LEU A 233 ? ? 178.89 112.52 63 6 PRO A 239 ? ? -67.11 95.30 64 6 TYR A 262 ? ? -70.74 -151.50 65 6 MET A 264 ? ? -67.40 8.75 66 7 ALA A 152 ? ? -102.86 -162.22 67 7 THR A 169 ? ? -137.27 -68.29 68 7 SER A 177 ? ? -165.03 112.56 69 7 LYS A 187 ? ? -178.80 92.45 70 7 PRO A 192 ? ? -60.70 97.98 71 7 LEU A 224 ? ? -142.02 16.96 72 7 PRO A 239 ? ? -62.01 98.43 73 7 TYR A 262 ? ? -81.01 -149.89 74 7 SER A 265 ? ? -145.36 -46.96 75 7 GLU A 269 ? ? -177.83 141.90 76 8 LEU A 133 ? ? -116.42 -168.06 77 8 MET A 149 ? ? 58.08 93.91 78 8 PRO A 159 ? ? -67.20 -168.38 79 8 SER A 160 ? ? -125.31 -167.87 80 8 PHE A 164 ? ? -86.71 -78.69 81 8 THR A 169 ? ? -149.03 -44.28 82 8 LYS A 187 ? ? -156.74 66.59 83 8 PRO A 192 ? ? -65.46 83.77 84 8 ASN A 253 ? ? -79.15 -102.05 85 8 GLU A 254 ? ? 48.19 -154.17 86 8 TYR A 262 ? ? -73.12 -150.51 87 8 MET A 264 ? ? -73.28 21.71 88 9 THR A 147 ? ? 58.23 19.09 89 9 ALA A 152 ? ? 68.89 148.63 90 9 THR A 169 ? ? -135.81 -66.54 91 9 LYS A 187 ? ? -169.25 88.15 92 9 PRO A 192 ? ? -58.03 108.47 93 9 GLU A 212 ? ? 178.57 171.63 94 9 HIS A 251 ? ? -120.68 -54.47 95 9 TYR A 262 ? ? -71.96 -145.74 96 9 MET A 264 ? ? -73.15 31.68 97 10 ALA A 150 ? ? -63.56 87.97 98 10 THR A 169 ? ? 88.09 -22.48 99 10 ASP A 186 ? ? -105.99 54.62 100 10 SER A 188 ? ? -92.38 45.09 101 10 PRO A 192 ? ? -51.25 106.68 102 10 GLU A 212 ? ? 178.31 154.68 103 10 ASN A 237 ? ? -75.98 49.08 104 10 PRO A 239 ? ? -59.74 88.40 105 10 TYR A 262 ? ? -80.66 -151.90 106 10 SER A 265 ? ? -152.31 -47.03 #