HEADER PROTEIN BINDING 28-JUN-12 2LV4 TITLE ZIRS C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OUTER MEMBRANE OR EXPORTED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL RESIDUES 136-276; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. LT2; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: STM1668; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX6P1 KEYWDS ANTIVIRULENCE, ADHESION, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR G.PREHNA,Y.LI,N.STOYNOV,M.OKON,M.VUKOVIC,L.P.MCINTOSH,L.J.FOSTER, AUTHOR 2 B.FINLAY,N.C.J.STRYNADKA REVDAT 3 14-JUN-23 2LV4 1 REMARK SEQADV REVDAT 2 10-OCT-12 2LV4 1 JRNL REVDAT 1 22-AUG-12 2LV4 0 JRNL AUTH G.PREHNA,Y.LI,N.STOYNOV,M.OKON,M.VUCKOVIC,L.P.MCINTOSH, JRNL AUTH 2 L.J.FOSTER,B.B.FINLAY,N.C.STRYNADKA JRNL TITL THE ZINC REGULATED ANTIVIRULENCE PATHWAY OF SALMONELLA IS A JRNL TITL 2 MULTIPROTEIN IMMUNOGLOBULIN ADHESION SYSTEM. JRNL REF J.BIOL.CHEM. V. 287 32324 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22810234 JRNL DOI 10.1074/JBC.M112.357210 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRDRAW, CYANA, CNSSOLVE REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRDRAW), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNSSOLVE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LV4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000102871. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 ZIRS, 50 MM TRIS, 50 MM SODIUM REMARK 210 CHLORIDE, 0.1 MM TCEP, 0.1 MM REMARK 210 PMSF, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D CBCA(CO)NH; 3D REMARK 210 HNCO; HNCACO; 2D 1H-15N HSQC; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; CCC-TOCSY-NNH; CT- REMARK 210 HSQC; (HB)CB(CGCD)HD_AROMATIC; REMARK 210 HBCBGCCC-TOCSY; HCC-TOCSY-NNH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, TALOS, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING, DISTANCE REMARK 210 GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 145 91.11 39.35 REMARK 500 1 VAL A 161 -154.98 -105.92 REMARK 500 1 SER A 162 -166.88 -125.96 REMARK 500 1 THR A 169 -50.20 -142.24 REMARK 500 1 GLU A 170 47.57 -92.11 REMARK 500 1 ASN A 174 -162.06 -78.78 REMARK 500 1 SER A 177 118.59 -160.18 REMARK 500 1 ASP A 186 72.61 -111.00 REMARK 500 1 LYS A 187 90.48 -179.37 REMARK 500 1 SER A 188 57.89 -93.91 REMARK 500 1 PRO A 192 99.71 -59.76 REMARK 500 1 LEU A 227 78.31 -109.79 REMARK 500 1 TYR A 262 -144.81 -76.30 REMARK 500 1 SER A 265 -51.91 -150.40 REMARK 500 2 ALA A 150 -69.08 -144.71 REMARK 500 2 THR A 169 -31.43 -137.87 REMARK 500 2 THR A 171 75.32 41.64 REMARK 500 2 ASP A 186 76.06 -108.64 REMARK 500 2 LYS A 187 75.20 -175.11 REMARK 500 2 SER A 188 52.34 -97.31 REMARK 500 2 PRO A 192 101.01 -53.90 REMARK 500 2 PRO A 239 94.97 -64.36 REMARK 500 2 HIS A 251 -61.75 -132.01 REMARK 500 2 TYR A 262 -145.49 -83.27 REMARK 500 2 SER A 265 -49.93 -149.71 REMARK 500 3 ALA A 150 109.48 -169.90 REMARK 500 3 THR A 169 -39.12 -139.81 REMARK 500 3 GLU A 170 33.32 -86.19 REMARK 500 3 SER A 184 -177.50 -171.43 REMARK 500 3 ASP A 186 32.92 -92.90 REMARK 500 3 LYS A 187 89.09 -155.74 REMARK 500 3 PRO A 192 105.65 -56.27 REMARK 500 3 PRO A 239 93.36 -69.55 REMARK 500 3 TYR A 262 -154.42 -75.68 REMARK 500 3 SER A 265 -35.42 -150.81 REMARK 500 4 LEU A 133 89.76 61.97 REMARK 500 4 SER A 137 74.66 46.88 REMARK 500 4 ALA A 150 -150.45 -119.58 REMARK 500 4 THR A 169 -39.93 80.73 REMARK 500 4 GLU A 170 71.67 -106.85 REMARK 500 4 THR A 171 -179.38 -55.37 REMARK 500 4 ASP A 186 64.89 -113.15 REMARK 500 4 LYS A 187 78.40 -169.41 REMARK 500 4 PRO A 192 89.24 -59.35 REMARK 500 4 GLU A 212 146.92 -176.00 REMARK 500 4 THR A 218 94.35 -160.06 REMARK 500 4 PRO A 239 79.24 -68.62 REMARK 500 4 TYR A 262 -157.04 -75.74 REMARK 500 4 SER A 265 -46.08 -151.47 REMARK 500 5 LYS A 138 -163.73 -111.82 REMARK 500 REMARK 500 THIS ENTRY HAS 106 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18553 RELATED DB: BMRB DBREF 2LV4 A 136 276 UNP Q8ZP79 Q8ZP79_SALTY 136 276 SEQADV 2LV4 GLY A 131 UNP Q8ZP79 EXPRESSION TAG SEQADV 2LV4 PRO A 132 UNP Q8ZP79 EXPRESSION TAG SEQADV 2LV4 LEU A 133 UNP Q8ZP79 EXPRESSION TAG SEQADV 2LV4 GLY A 134 UNP Q8ZP79 EXPRESSION TAG SEQADV 2LV4 SER A 135 UNP Q8ZP79 EXPRESSION TAG SEQRES 1 A 146 GLY PRO LEU GLY SER GLY SER LYS ILE LYS LEU GLU ILE SEQRES 2 A 146 TYR ASN GLU THR ASP MET ALA SER ALA SER GLY TYR THR SEQRES 3 A 146 PRO VAL PRO SER VAL SER GLU PHE GLN TYR ILE GLU THR SEQRES 4 A 146 GLU THR ILE SER ASN THR PRO SER PRO ASP LEU THR VAL SEQRES 5 A 146 MET SER ILE ASP LYS SER VAL LEU SER PRO GLY GLU SER SEQRES 6 A 146 ALA THR ILE THR THR ILE VAL LYS ASP ILE ASP GLY ASN SEQRES 7 A 146 PRO VAL ASN GLU VAL HIS ILE ASN LYS THR VAL ALA ARG SEQRES 8 A 146 GLU ASN LEU LYS GLY LEU TRP ASP TYR GLY PRO LEU LYS SEQRES 9 A 146 LYS GLU ASN VAL PRO GLY LYS TYR THR GLN VAL ILE THR SEQRES 10 A 146 TYR ARG GLY HIS SER ASN GLU ARG ILE ASP ILE SER PHE SEQRES 11 A 146 LYS TYR ALA MET SER PHE THR LYS GLU ILE SER ILE ARG SEQRES 12 A 146 GLY ARG LEU HELIX 1 1 SER A 177 THR A 181 5 5 SHEET 1 A 4 VAL A 182 SER A 184 0 SHEET 2 A 4 SER A 195 ILE A 201 -1 O THR A 199 N SER A 184 SHEET 3 A 4 LYS A 241 ARG A 249 -1 O TYR A 242 N THR A 200 SHEET 4 A 4 LEU A 227 TYR A 230 -1 N ASP A 229 O THR A 247 SHEET 1 B 4 VAL A 182 SER A 184 0 SHEET 2 B 4 SER A 195 ILE A 201 -1 O THR A 199 N SER A 184 SHEET 3 B 4 LYS A 241 ARG A 249 -1 O TYR A 242 N THR A 200 SHEET 4 B 4 LYS A 234 LYS A 235 -1 N LYS A 234 O THR A 243 SHEET 1 C 3 ASN A 216 ARG A 221 0 SHEET 2 C 3 ARG A 255 LYS A 261 -1 O ASP A 257 N ALA A 220 SHEET 3 C 3 THR A 267 ARG A 273 -1 O ILE A 272 N ILE A 256 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1