data_2LXA # _entry.id 2LXA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LXA pdb_00002lxa 10.2210/pdb2lxa/pdb RCSB RCSB102947 ? ? BMRB 18669 ? ? WWPDB D_1000102947 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2LXB PDB . unspecified 2LXC PDB . unspecified 4GOC PDB 'Crystal structure of the same protein' unspecified 4GOD PDB 'Crystal structure of SGTA dimerization domain, the human homolog of the Get5 binding partner, Sgt2' unspecified 4GOE PDB 'Crystal structure of SGTA dimerization domain, the human homolog of Get5 binding partner, Sgt2' unspecified 4GOF PDB 'Crystal structure of SGTA dimerization domain, the human homolog of Get5 binding partner, Sgt2' unspecified 18669 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LXA _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-08-19 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chartron, J.W.' 1 'Vandervelde, D.G.' 2 'Clemons Jr., W.M.' 3 # _citation.id primary _citation.title ;Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. ; _citation.journal_abbrev 'Cell Rep' _citation.journal_volume 2 _citation.page_first 1620 _citation.page_last 1632 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23142665 _citation.pdbx_database_id_DOI 10.1016/j.celrep.2012.10.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chartron, J.W.' 1 ? primary 'Vandervelde, D.G.' 2 ? primary 'Clemons, W.M.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ubiquitin-like protein MDY2' _entity.formula_weight 9999.677 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ubiquitin-like domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Golgi to ER traffic protein 5, Mating-deficient protein 2, Translation machinery-associated protein 24' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPNL EHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPNL EHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 HIS n 1 4 LEU n 1 5 THR n 1 6 LEU n 1 7 LYS n 1 8 LYS n 1 9 ILE n 1 10 GLN n 1 11 ALA n 1 12 PRO n 1 13 LYS n 1 14 PHE n 1 15 SER n 1 16 ILE n 1 17 GLU n 1 18 HIS n 1 19 ASP n 1 20 PHE n 1 21 SER n 1 22 PRO n 1 23 SER n 1 24 ASP n 1 25 THR n 1 26 ILE n 1 27 LEU n 1 28 GLN n 1 29 ILE n 1 30 LYS n 1 31 GLN n 1 32 HIS n 1 33 LEU n 1 34 ILE n 1 35 SER n 1 36 GLU n 1 37 GLU n 1 38 LYS n 1 39 ALA n 1 40 SER n 1 41 HIS n 1 42 ILE n 1 43 SER n 1 44 GLU n 1 45 ILE n 1 46 LYS n 1 47 LEU n 1 48 LEU n 1 49 LEU n 1 50 LYS n 1 51 GLY n 1 52 LYS n 1 53 VAL n 1 54 LEU n 1 55 HIS n 1 56 ASP n 1 57 ASN n 1 58 LEU n 1 59 PHE n 1 60 LEU n 1 61 SER n 1 62 ASP n 1 63 LEU n 1 64 LYS n 1 65 VAL n 1 66 THR n 1 67 PRO n 1 68 ALA n 1 69 ASN n 1 70 SER n 1 71 THR n 1 72 ILE n 1 73 THR n 1 74 VAL n 1 75 MET n 1 76 ILE n 1 77 LYS n 1 78 PRO n 1 79 ASN n 1 80 LEU n 1 81 GLU n 1 82 HIS n 1 83 HIS n 1 84 HIS n 1 85 HIS n 1 86 HIS n 1 87 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GET5, MDY2, TMA24, YOL111C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'NiCo21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET33b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MDY2_YEAST _struct_ref.pdbx_db_accession Q12285 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPN _struct_ref.pdbx_align_begin 74 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LXA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 79 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12285 _struct_ref_seq.db_align_beg 74 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 151 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 74 _struct_ref_seq.pdbx_auth_seq_align_end 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2LXA MET A 1 ? UNP Q12285 ? ? 'initiating methionine' 73 1 1 2LXA LEU A 80 ? UNP Q12285 ? ? 'expression tag' 152 2 1 2LXA GLU A 81 ? UNP Q12285 ? ? 'expression tag' 153 3 1 2LXA HIS A 82 ? UNP Q12285 ? ? 'expression tag' 154 4 1 2LXA HIS A 83 ? UNP Q12285 ? ? 'expression tag' 155 5 1 2LXA HIS A 84 ? UNP Q12285 ? ? 'expression tag' 156 6 1 2LXA HIS A 85 ? UNP Q12285 ? ? 'expression tag' 157 7 1 2LXA HIS A 86 ? UNP Q12285 ? ? 'expression tag' 158 8 1 2LXA HIS A 87 ? UNP Q12285 ? ? 'expression tag' 159 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D CBCA(CO)NH' 1 3 1 '3D HNCACB' 1 4 1 '3D HCCH-TOCSY' 1 5 1 '3D 1H-15N TOCSY' 1 6 1 '2D 1H-13C HSQC aliphatic' 1 7 1 '3D 1H-15N NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 6.1 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 297.5 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1 mM [U-100% 13C; U-100% 15N] Get5, 20 mM sodium phosphate, 100 mM sodium chloride, 0.02 % sodium azide, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2LXA _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'REFINED IN EXPLICIT WATER' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LXA _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LXA _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VnmrJ ? 1 CCPN 'chemical shift assignment' Analysis ? 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 3 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS+ ? 4 ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 2.3 5 ;Linge, O'Donoghue and Nilges ; refinement ARIA 2.3 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LXA _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LXA _struct.title 'Solution structure of the Get5 ubiquitin-like domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LXA _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'ubiquitin-like domain, protein-protein interaction, Sgt2 binding domain, GET pathway, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 25 ? GLU A 36 ? THR A 97 GLU A 108 1 ? 12 HELX_P HELX_P2 2 PHE A 59 ? LYS A 64 ? PHE A 131 LYS A 136 1 ? 6 HELX_P HELX_P3 3 THR A 66 ? ASN A 69 ? THR A 138 ASN A 141 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 1 -2.63 2 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 2 -1.23 3 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 3 -7.15 4 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 4 -3.07 5 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 5 -1.99 6 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 6 -6.82 7 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 7 -2.95 8 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 8 -7.50 9 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 9 -3.50 10 ALA 11 A . ? ALA 83 A PRO 12 A ? PRO 84 A 10 -2.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 14 ? SER A 15 ? PHE A 86 SER A 87 A 2 HIS A 3 ? LYS A 8 ? HIS A 75 LYS A 80 A 3 HIS A 18 ? ASP A 19 ? HIS A 90 ASP A 91 B 1 PHE A 14 ? SER A 15 ? PHE A 86 SER A 87 B 2 HIS A 3 ? LYS A 8 ? HIS A 75 LYS A 80 B 3 THR A 71 ? ILE A 76 ? THR A 143 ILE A 148 B 4 ILE A 45 ? LEU A 49 ? ILE A 117 LEU A 121 B 5 LYS A 52 ? VAL A 53 ? LYS A 124 VAL A 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 14 ? O PHE A 86 N LYS A 8 ? N LYS A 80 A 2 3 N LEU A 4 ? N LEU A 76 O HIS A 18 ? O HIS A 90 B 1 2 O PHE A 14 ? O PHE A 86 N LYS A 8 ? N LYS A 80 B 2 3 N LYS A 7 ? N LYS A 79 O ILE A 72 ? O ILE A 144 B 3 4 O MET A 75 ? O MET A 147 N LYS A 46 ? N LYS A 118 B 4 5 N LEU A 49 ? N LEU A 121 O LYS A 52 ? O LYS A 124 # _atom_sites.entry_id 2LXA _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 73 73 MET MET A . n A 1 2 VAL 2 74 74 VAL VAL A . n A 1 3 HIS 3 75 75 HIS HIS A . n A 1 4 LEU 4 76 76 LEU LEU A . n A 1 5 THR 5 77 77 THR THR A . n A 1 6 LEU 6 78 78 LEU LEU A . n A 1 7 LYS 7 79 79 LYS LYS A . n A 1 8 LYS 8 80 80 LYS LYS A . n A 1 9 ILE 9 81 81 ILE ILE A . n A 1 10 GLN 10 82 82 GLN GLN A . n A 1 11 ALA 11 83 83 ALA ALA A . n A 1 12 PRO 12 84 84 PRO PRO A . n A 1 13 LYS 13 85 85 LYS LYS A . n A 1 14 PHE 14 86 86 PHE PHE A . n A 1 15 SER 15 87 87 SER SER A . n A 1 16 ILE 16 88 88 ILE ILE A . n A 1 17 GLU 17 89 89 GLU GLU A . n A 1 18 HIS 18 90 90 HIS HIS A . n A 1 19 ASP 19 91 91 ASP ASP A . n A 1 20 PHE 20 92 92 PHE PHE A . n A 1 21 SER 21 93 93 SER SER A . n A 1 22 PRO 22 94 94 PRO PRO A . n A 1 23 SER 23 95 95 SER SER A . n A 1 24 ASP 24 96 96 ASP ASP A . n A 1 25 THR 25 97 97 THR THR A . n A 1 26 ILE 26 98 98 ILE ILE A . n A 1 27 LEU 27 99 99 LEU LEU A . n A 1 28 GLN 28 100 100 GLN GLN A . n A 1 29 ILE 29 101 101 ILE ILE A . n A 1 30 LYS 30 102 102 LYS LYS A . n A 1 31 GLN 31 103 103 GLN GLN A . n A 1 32 HIS 32 104 104 HIS HIS A . n A 1 33 LEU 33 105 105 LEU LEU A . n A 1 34 ILE 34 106 106 ILE ILE A . n A 1 35 SER 35 107 107 SER SER A . n A 1 36 GLU 36 108 108 GLU GLU A . n A 1 37 GLU 37 109 109 GLU GLU A . n A 1 38 LYS 38 110 110 LYS LYS A . n A 1 39 ALA 39 111 111 ALA ALA A . n A 1 40 SER 40 112 112 SER SER A . n A 1 41 HIS 41 113 113 HIS HIS A . n A 1 42 ILE 42 114 114 ILE ILE A . n A 1 43 SER 43 115 115 SER SER A . n A 1 44 GLU 44 116 116 GLU GLU A . n A 1 45 ILE 45 117 117 ILE ILE A . n A 1 46 LYS 46 118 118 LYS LYS A . n A 1 47 LEU 47 119 119 LEU LEU A . n A 1 48 LEU 48 120 120 LEU LEU A . n A 1 49 LEU 49 121 121 LEU LEU A . n A 1 50 LYS 50 122 122 LYS LYS A . n A 1 51 GLY 51 123 123 GLY GLY A . n A 1 52 LYS 52 124 124 LYS LYS A . n A 1 53 VAL 53 125 125 VAL VAL A . n A 1 54 LEU 54 126 126 LEU LEU A . n A 1 55 HIS 55 127 127 HIS HIS A . n A 1 56 ASP 56 128 128 ASP ASP A . n A 1 57 ASN 57 129 129 ASN ASN A . n A 1 58 LEU 58 130 130 LEU LEU A . n A 1 59 PHE 59 131 131 PHE PHE A . n A 1 60 LEU 60 132 132 LEU LEU A . n A 1 61 SER 61 133 133 SER SER A . n A 1 62 ASP 62 134 134 ASP ASP A . n A 1 63 LEU 63 135 135 LEU LEU A . n A 1 64 LYS 64 136 136 LYS LYS A . n A 1 65 VAL 65 137 137 VAL VAL A . n A 1 66 THR 66 138 138 THR THR A . n A 1 67 PRO 67 139 139 PRO PRO A . n A 1 68 ALA 68 140 140 ALA ALA A . n A 1 69 ASN 69 141 141 ASN ASN A . n A 1 70 SER 70 142 142 SER SER A . n A 1 71 THR 71 143 143 THR THR A . n A 1 72 ILE 72 144 144 ILE ILE A . n A 1 73 THR 73 145 145 THR THR A . n A 1 74 VAL 74 146 146 VAL VAL A . n A 1 75 MET 75 147 147 MET MET A . n A 1 76 ILE 76 148 148 ILE ILE A . n A 1 77 LYS 77 149 149 LYS LYS A . n A 1 78 PRO 78 150 150 PRO PRO A . n A 1 79 ASN 79 151 151 ASN ASN A . n A 1 80 LEU 80 152 152 LEU LEU A . n A 1 81 GLU 81 153 153 GLU GLU A . n A 1 82 HIS 82 154 154 HIS HIS A . n A 1 83 HIS 83 155 155 HIS HIS A . n A 1 84 HIS 84 156 156 HIS HIS A . n A 1 85 HIS 85 157 157 HIS HIS A . n A 1 86 HIS 86 158 158 HIS HIS A . n A 1 87 HIS 87 159 159 HIS HIS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-21 2 'Structure model' 1 1 2012-11-28 3 'Structure model' 1 2 2013-01-16 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Get5-1 1 ? mM '[U-100% 13C; U-100% 15N]' 1 'sodium phosphate-2' 20 ? mM ? 1 'sodium chloride-3' 100 ? mM ? 1 'sodium azide-4' 0.02 ? % ? 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 82 ? ? -104.15 -89.75 2 1 LYS A 85 ? ? 72.56 143.51 3 1 PHE A 86 ? ? -175.08 -177.52 4 1 SER A 112 ? ? -103.16 -60.44 5 2 GLN A 82 ? ? -106.09 -91.41 6 2 LYS A 85 ? ? 72.10 148.62 7 2 PHE A 86 ? ? -178.90 -177.24 8 2 LYS A 136 ? ? 60.36 77.32 9 2 ASN A 151 ? ? -105.88 73.78 10 3 GLN A 82 ? ? -101.54 -88.71 11 3 LYS A 85 ? ? 74.67 147.13 12 3 ASN A 151 ? ? 66.14 168.59 13 3 GLU A 153 ? ? -68.57 94.29 14 3 HIS A 158 ? ? 69.06 -178.56 15 4 GLN A 82 ? ? -114.68 -91.77 16 4 LYS A 85 ? ? 75.79 150.37 17 4 PHE A 86 ? ? -178.71 -177.22 18 4 LYS A 136 ? ? 58.67 72.43 19 4 PRO A 150 ? ? -68.92 85.93 20 4 ASN A 151 ? ? -68.27 82.39 21 4 HIS A 158 ? ? 62.95 78.86 22 5 GLN A 82 ? ? -116.49 -88.13 23 5 LYS A 85 ? ? 74.91 147.98 24 5 PRO A 150 ? ? -58.63 100.91 25 5 ASN A 151 ? ? 70.48 97.33 26 5 HIS A 155 ? ? 64.04 82.47 27 6 GLN A 82 ? ? -116.19 -95.20 28 6 LYS A 85 ? ? 74.65 154.47 29 6 PHE A 86 ? ? 179.84 -177.25 30 6 LYS A 136 ? ? 57.44 72.74 31 6 HIS A 155 ? ? -97.94 41.05 32 7 GLN A 82 ? ? -102.38 -96.28 33 7 LYS A 85 ? ? 74.70 143.13 34 7 LYS A 136 ? ? 55.01 76.14 35 8 GLN A 82 ? ? -98.36 -90.85 36 8 LYS A 85 ? ? 75.74 154.73 37 8 PHE A 86 ? ? -175.21 -179.04 38 8 LYS A 136 ? ? 59.82 75.33 39 8 HIS A 156 ? ? -142.50 35.69 40 9 VAL A 74 ? ? 55.75 80.27 41 9 GLN A 82 ? ? -114.69 -85.92 42 9 LYS A 85 ? ? 74.44 143.63 43 9 PHE A 86 ? ? -178.83 -177.17 44 9 SER A 112 ? ? -108.91 -66.34 45 9 LYS A 136 ? ? 58.75 70.08 46 10 GLN A 82 ? ? -115.84 -90.81 47 10 LYS A 85 ? ? 73.52 145.68 48 10 PHE A 86 ? ? -174.41 -177.35 49 10 SER A 112 ? ? -92.74 -64.40 50 10 LYS A 136 ? ? 60.90 75.18 51 10 ASN A 141 ? ? -104.07 43.85 #