HEADER LIGASE 30-AUG-12 2LXN TITLE SOLUTION NMR STRUCTURE OF GLUTAMINE AMIDO TRANSFERASE SUBUNIT OF TITLE 2 GAUNOSINE MONOPHOSPHATE SYNTHETASE FROM METHANOCALDOCOCCUS JANNASCHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: GMP SYNTHASE [GLUTAMINE-HYDROLYZING] SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLUTAMINE AMIDOTRANSFERASE; COMPND 5 EC: 6.3.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 5 GENE: GUAAA, MJ1575; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET3ATR KEYWDS GLUTAMINE AMIDOTRANSFERASE, AMMONIA CHANNELING, DE-NOVO PURINE KEYWDS 2 NUCLEOTIDE BIOSYNTHESIS, SOLUTION NMR STRUCTURE, METHANOCALDOCOCCUS KEYWDS 3 JANNASCHII, LIGASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.ALI,S.KUMAR,H.BALARAM,S.P.SARMA REVDAT 3 15-MAY-24 2LXN 1 REMARK REVDAT 2 14-JUN-23 2LXN 1 REMARK REVDAT 1 12-JUN-13 2LXN 0 JRNL AUTH R.ALI,S.KUMAR,H.BALARAM,S.P.SARMA JRNL TITL 1H, 13C, 15N ASSIGNMENT AND SECONDARY STRUCTURE JRNL TITL 2 DETERMINATION OF GLUTAMINE AMIDO TRANSFERASE SUBUNIT OF JRNL TITL 3 GAUNOSINE MONOPHOSPHATE SYNTHETASE FROM METHANOCALDOCOCCUS JRNL TITL 4 JANNASCHII JRNL REF BIOMOL.NMR ASSIGN. V. 6 193 2012 JRNL REFN ISSN 1874-2718 JRNL PMID 22203461 JRNL DOI 10.1007/S12104-011-9354-X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA-3.0 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LXN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000102960. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.7MM [U-99% 15N] GATASE SUBUNIT REMARK 210 -1, 10% D2O-2, 90% H2O-3, 1MM REMARK 210 PMSF-4, 20MM POTASSIUM PHOSPHATE- REMARK 210 5, 0.1MM EDTA-6, 2MM DTT-7, 0.01% REMARK 210 SODIUM AZIDE-8, 90% H2O/10% D2O; REMARK 210 0.6MM [U-99% 13C; U-99% 15N] REMARK 210 GATASE SUBUNIT-9, 90% H2O-10, 10% REMARK 210 D2O-11, 20MM POTASSIUM REMARK 210 PHOSPHATE-12, 0.1MM EDTA-13, 2MM REMARK 210 DTT-14, 1MM PMSF-15, 0.01% REMARK 210 SODIUM AZIDE-16, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCA; 3D HN(CO)CA; 3D CBCA(CO) REMARK 210 NH; 3D HNCACB; 3D 1H-15N NOESY; REMARK 210 3D 1H-15N TOCSY; 3D HNHA; 3D REMARK 210 HCCH-TOCSY; 3D HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CCPN, CYANA-3.0, REMARK 210 TALOS+, PROCHECK, PROCHECKNMR, REMARK 210 CSI, MOLMOL, NMR-STAR, PSVS REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 11 36.04 -97.39 REMARK 500 1 ASN A 41 71.84 -113.08 REMARK 500 1 VAL A 44 161.00 -46.03 REMARK 500 1 CYS A 76 -83.36 64.50 REMARK 500 1 ALA A 93 -60.13 -122.05 REMARK 500 1 GLU A 97 -66.15 -107.87 REMARK 500 1 TYR A 98 95.26 -62.86 REMARK 500 1 TYR A 104 -169.42 -79.26 REMARK 500 1 VAL A 105 93.74 -60.15 REMARK 500 1 ASP A 110 -61.89 -120.46 REMARK 500 1 PRO A 116 -169.50 -69.78 REMARK 500 1 ALA A 123 132.87 -172.65 REMARK 500 1 HIS A 125 37.85 -91.86 REMARK 500 1 CYS A 145 79.89 -116.92 REMARK 500 1 VAL A 147 35.53 -94.72 REMARK 500 1 PRO A 156 77.17 -69.69 REMARK 500 1 THR A 169 104.36 -57.28 REMARK 500 2 TYR A 11 35.44 -98.95 REMARK 500 2 CYS A 76 -82.36 64.82 REMARK 500 2 ALA A 93 -60.43 -121.89 REMARK 500 2 TYR A 104 -169.92 -78.20 REMARK 500 2 VAL A 105 94.00 -60.45 REMARK 500 2 ASP A 110 -62.38 -120.36 REMARK 500 2 PRO A 116 -169.61 -69.77 REMARK 500 2 VAL A 147 35.81 -94.66 REMARK 500 2 PRO A 156 79.40 -69.77 REMARK 500 3 ASN A 41 61.60 -109.78 REMARK 500 3 VAL A 44 166.22 -48.48 REMARK 500 3 CYS A 76 -83.62 62.62 REMARK 500 3 ALA A 93 -60.37 -122.04 REMARK 500 3 VAL A 105 94.87 -59.61 REMARK 500 3 ASP A 110 -61.99 -120.64 REMARK 500 3 PRO A 116 -169.62 -69.76 REMARK 500 3 PRO A 156 76.64 -69.77 REMARK 500 4 TYR A 11 34.60 -96.22 REMARK 500 4 ASN A 41 76.33 -116.11 REMARK 500 4 VAL A 44 164.35 -47.86 REMARK 500 4 CYS A 76 -82.96 64.85 REMARK 500 4 ALA A 93 -60.49 -121.84 REMARK 500 4 VAL A 105 94.00 -60.26 REMARK 500 4 ASP A 110 -62.88 -120.39 REMARK 500 4 PRO A 116 -169.77 -69.82 REMARK 500 4 VAL A 147 37.21 -94.19 REMARK 500 4 PRO A 156 73.77 -69.76 REMARK 500 5 ASN A 41 66.43 -110.45 REMARK 500 5 CYS A 76 -80.75 64.30 REMARK 500 5 ALA A 93 -60.23 -121.56 REMARK 500 5 TYR A 104 -169.75 -74.24 REMARK 500 5 VAL A 105 94.80 -59.11 REMARK 500 5 ASP A 110 -60.89 -121.62 REMARK 500 REMARK 500 THIS ENTRY HAS 226 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17935 RELATED DB: BMRB REMARK 900 1H, 13C, 15N ASSIGNMENT AND SECONDARY STRUCTURE DETERMINATION OF REMARK 900 GLUTAMINE AMIDO TRANSFERASE SUBUNIT OF GAUNOSINE MONOPHOSPHATE REMARK 900 SYNTHETASE FROM METHANOCALDOCOCCUS JANNASCHII DBREF 2LXN A 1 188 UNP Q58970 GUAAA_METJA 1 188 SEQRES 1 A 188 MET ILE VAL ILE LEU ASP ASN GLY GLY GLN TYR VAL HIS SEQRES 2 A 188 ARG ILE HIS ARG SER LEU LYS TYR ILE GLY VAL SER SER SEQRES 3 A 188 LYS ILE VAL PRO ASN THR THR PRO LEU GLU GLU ILE GLU SEQRES 4 A 188 SER ASN LYS GLU VAL LYS GLY ILE ILE LEU SER GLY GLY SEQRES 5 A 188 PRO ASP ILE GLU LYS ALA LYS ASN CYS ILE ASP ILE ALA SEQRES 6 A 188 LEU ASN ALA LYS LEU PRO ILE LEU GLY ILE CYS LEU GLY SEQRES 7 A 188 HIS GLN LEU ILE ALA LEU ALA TYR GLY GLY GLU VAL GLY SEQRES 8 A 188 ARG ALA GLU ALA GLU GLU TYR ALA LEU THR LYS VAL TYR SEQRES 9 A 188 VAL ASP LYS GLU ASN ASP LEU PHE LYS ASN VAL PRO ARG SEQRES 10 A 188 GLU PHE ASN ALA TRP ALA SER HIS LYS ASP GLU VAL LYS SEQRES 11 A 188 LYS VAL PRO GLU GLY PHE GLU ILE LEU ALA HIS SER ASP SEQRES 12 A 188 ILE CYS GLN VAL GLU ALA MET LYS HIS LYS THR LYS PRO SEQRES 13 A 188 ILE TYR GLY VAL GLN PHE HIS PRO GLU VAL ALA HIS THR SEQRES 14 A 188 GLU TYR GLY ASN GLU ILE LEU LYS ASN PHE CYS LYS VAL SEQRES 15 A 188 CYS GLY TYR LYS PHE GLU HELIX 1 1 VAL A 12 GLY A 23 1 12 HELIX 2 2 LEU A 35 SER A 40 1 6 HELIX 3 3 ASN A 60 ASN A 67 1 8 HELIX 4 4 LEU A 77 GLY A 87 1 11 HELIX 5 5 GLY A 172 CYS A 183 1 12 SHEET 1 A 7 SER A 26 VAL A 29 0 SHEET 2 A 7 ILE A 2 LEU A 5 1 N ILE A 4 O VAL A 29 SHEET 3 A 7 ILE A 47 LEU A 49 1 O ILE A 48 N VAL A 3 SHEET 4 A 7 ILE A 72 ILE A 75 1 O LEU A 73 N ILE A 47 SHEET 5 A 7 ILE A 157 VAL A 160 1 O TYR A 158 N ILE A 72 SHEET 6 A 7 ALA A 149 HIS A 152 -1 N MET A 150 O GLY A 159 SHEET 7 A 7 PHE A 136 ALA A 140 -1 N GLU A 137 O LYS A 151 SHEET 1 B 2 VAL A 90 ARG A 92 0 SHEET 2 B 2 ASP A 127 VAL A 129 -1 O GLU A 128 N GLY A 91 SHEET 1 C 2 LEU A 100 VAL A 103 0 SHEET 2 C 2 PHE A 119 TRP A 122 -1 O PHE A 119 N VAL A 103 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1